Dpon004211.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dendroctonus ponderosae
Gene Symbol
Trerf1
Assembly
GCA_000355655.1
Location
NW:323026-479698[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-09 5e-06 25.8 0.2 2 46 1263 1307 1262 1307 0.96

Sequence Information

Coding Sequence
ATGAGCAGGTCGACCAAGaGCGACAGCCTAGCGAAATCTGAACCTTCGTCAAAGGATATGACAGCATCAGTTAATACGgCCGTTCACGAATTCTCTGGAGTCCGTCTTCCCCTCCAGCCATACACTGGAAGCCATGCCGTTTTTATGTATTCCACAGCTTCGGACGGTAACGTCACGTTGCAGCTCAAAGAGCCCGATGATCTCGACAGGAATAGCCTGGCGGTCATGCTGGCACGATTACAAGAAGACTCTTCGTTTTCCATCTACACCCAGGACACGGATATTCTGTCGGATGGAGGTATCGACGTTCTGCTCGGTCCGGGCAGCTCTGGAGAAAATTCCGGCAATGATACCGTGACTGcatcttttgattttttcgattcaTCCAGTGCCCACGATTTAACGCTATCACCCCAAACACTTTCTAACACTACAGAGGCCTTAATCAATGACAATTCGGACAGTTTAGGACTCCCAGCAGATAACGATACTGTATCGACGACAACAAAGGATGATGGAAAGCCAGGCCGGAGTTCACCGGATTTGAAAGGGAAAAGGCCTAAAACCAAACCAACTTCGCCAAACAGACAGGGTCCTCAACAATGCACGGTGTGTTCGAAGGTGTTTGGAAACGCATCAGCTTTGGCAAAACATAAGCTCACTCATAGCGACGAAAGGAAATACATTTGCACCGTGTGTAATAAAGCTTTCAAAAGACAAGATCATTTAAATGGTCACATGCTTACTCATCGCAATAAAAAGCCCTACGAATGCAAAGCAGACGGTTGTGGAAAGAGTTATTGCGATGCCAGATCTCTAAGAAGGCACACGGAAAATCATCATGTGCCTCCTTCAACGTCGAGCAGCTCGACCACCATGTCCCCAGCTCAAGGAGCTGCAGCTGGAGATGCAGCTTCACCTCATGGGAGCAGCTGCATCCAGTACGCTCCGCCTCCAACAGGCTCGCCTCCAGTCAAAGATAGCAGCAAAGAAGGGAAAAGTCAGTTGCAGCAGCTTTTGTCGACTGAACCCGCTAAGTGTGCCGGAAGAAGTAACGACGGGTTAACGAAAGAACAGCTGGATCTCATCCATCAAATCATGGAGCAAACGCAAAGACAGAACCAAGTAGTTTCGTCGCCATCCTCCACAAAACCATCGCCAAAGAAAAAGTCgcgaagcaaagaaaaaacgGTGGCAGCAGCGTCGTCTACCTCATGGTCGCCAAGTTCGcagCAGCAACAATGCATGCAGGTGAAAACGATTTCATCGGGGGCTTCGAGTCCTCAAAGTAAAGTTACCACAACAACCCCGTCTACGCCTTCGCCCACTGCCCAGGACAAGCAGCCCATCCTCAAGCCAGTGGAATGCAATTTATGCAAGAGAAGGTTTAAGAATATTCCTGCTCTGAATGGACACATGAGGTTGCATGGAGGCTACTTCAAAAAGGAtccagatacgaaaaaactggaTAAAAAAGAGCAAACTGGACCGCCGCTCCAAACCGCCAGCAGCAGCGTGCGGGCTTTGATCgaggaaaaaataatcaacaaacGAAATTCATCGCCCAGCACCCGACATGTCGAAGCGATCAGCCATACGACATCGGCTACACAAGTCGATATGGATCACAAGCACACTTCGTTCGTTGTTCCAGCTCCACCGCATCTGGTCCTCGATAAACACCGTAGACATTCCGATGCGGAGGCATTGAAGTCCTCCAAATCCTATCAAGAAGCTCAAGCGATCGCTGACCTTATTGTGAAAAGGGAAAAAATCTGTGTTAAACGTACTACCTCCGATCCAGGTCAGGCCGCGCATTTGTTGCAGTACCGCTCAGATTCATTCTCGCTGGATAACGTGGAAATATATCAAGACGAGCGGCAGTTTGTAACTCCTAGTTTAGAGGACGAGGTTTTCTCGAACAACACTATGATGATTCAGGGTGTTGATCCGAGTCATTTGTCTCAAATATCATTCCAGTCAGAATCACTAGACGACAATCTGTTAATTAAGGATGACAACTTGCTGACCATCAAGGAGGAGGGCCTTTTGGATATGAAGAATGAAGGGGATGAGGATCTTCAGGAACTGAGTCTGGATGATATTGCAAGTTTACATGAAGAGCCCATGACAATCTCGCAGCAGTCTATTCAAATCCCCGTCAATCAGGAGCTGCAAGCTGTGCTGAACTCCCCGTTACCTGAAAGCCTGGCGGAGTTCAGCACCTACCATTCGTCTAAGAATCTGGAAATTCAATCTCCTGGTTACCCGACCCATTCGCCGGGTGCCTATGCAAGATCACCGCACACTTTTACTACTCAGTCGCCTCTCCAAAGTCCCATGATCAGGCACGACTCTCCAGGCTTCGCCTATCCAACCCCTCCAGCTAGCCATGAAGGTCAGAGTCCATGCTTTGGACAAAACATGAACGTCTCCATGGTGTCGCCCAATGATGACTTTGGGCAGATGGTCGAAAGAGGCATCGACGAACCACCGCAGGCTTCTTCGCCTCTATCTGCGGCATTCTACACCAGCACAATGTCCAGCTCGGCGGCAGTTGAAGAAGCAATCCAGGAAATCCTGCCTGGCGAAAGTATAAATGAGGACAACCTTTATCCGCTTTCCAATACTCCACCTTCGCAGTCTGAAAACGATTCGTTAGGGCTCACTCCTGTGCCGTCTCCAAGAGTGACTACATCAATGCCTTCTCCTCATCCTTCTAATACATACAGTTCCTCACCAAAGGCTTCTAGTCAAGCATCTGCCTTACCGCAATGGGGATCTGGAACTTCCGCCACCTTAATGCTTCCAAATTCCGAGGATCCGCTTCTCTCGAGCCAACCGAAGGACTTTGTGTTGAAAAAGCGCATCCAATTGAACGGCGTTCCAGTAAGACTGTTGAGTAACAACGGACTGATCGAATTGAATGGGGGAAATTTCACGGGACTGTTGGTGGACGCCAATGGTGAGCTGAAGCTGATTCAGACCAGCAGTTCCGGCTGTGCAACGAAAAACTTCGTCCTGTCCAACGCCCAGCTGGTTACGACCAGTAGCCAGGAAATTGGAACCAAAGATGGTAGAGTTAAAGTGCAAAAGCTCACTCTGGCGAAAGCTGTGCCGAATCAAACGTCAACGAAAATTATCACTACTAATAGGTGTAAAATTGTGAATGAAGCGAGGAGGGAAGAATGCAACGATGTGTTTCTCAGTCCAACAACGATTCCAACTAGTAGCCCAATAAAACAAGCGCGAAAAAGACTACGCACCGAACCACTCCAACTCCCAGTATTCCACCAATCCAAGCTGCGCACAACCAGAAGTAAACCTCAAGGATCAACGCGGTTTACTCCTcagccaattttgaatcccCAACGACCCGGATCGGGCTTGTATGCGAATATAAAGTACAAATTCGGTGAGGATGGTTCCACTTGGGGCGACCCCATTCCAGAAACCGATTCAACTCCTCACATAAATATTGGCCCTCAAAATCAATGCACAATCCCCACTTATACGTCAGTGCCGAAACGGATGAGCCCGCAACCGGTTTATGAAGACCTGCTGTGGGATCCAGGAATCAGCAGCTGTACTGACTCAGAAGTCGATATGTATCTGGAGTTCGCATGCTGTGCCGCCATCCCGGGCGGAGGGCGAAACAAAGAATATGCCATGCATCTTCTTCATATGTGTGGTGGGAATATACATGATGCAATGCTTCGATTGATGCAGCCATCCCCGCATCTACCAGCTGACCATCCGCTACTGGCCTATTCATATAGTGAGAGTGACAAGTGGACATCTGCTGAAACTGAACTATTCCATAGATGCCTGCTGAAGTTCGACAAagattttattagaatagCTGAAGAGATCAAGTCGAAATCGGTGAAACAGTGCATCCAGTTTTACTATGTTTGGAAAAAAGTGTGTTCGGATGAGTACAGTCGGCTGAAAGCGCTGCGGCAAATGAAGCGGAATCACCGGAACGTGTCGGATAGCGACGACAAGCCCTATCCGGATGTTAAATTGCTAGGGATTGCTGATAGTGAATCTCCCATGAGGAATTTCCTTTGCGAATATCCAGATTGTTCAGCTAGTTTCAACTCGAGAGCGGCCCTGAATGGTCACATCCGGATCCATGGTGGGACGGCACGAAACTCGCCTACGCCCACCGTTTCCGATAGACGAAACGCGACGTCGGCGTCGTTTTCGGTATCGACGACGATTTGTCATCCCGATTCCACCGACCAAGAGTACCCTTGTAAGATTTGCGGGAAagtgttttcaaaaatcaagaGCCGTAGCGCCCATATGAAGTCGCATAGGCCGCCCGACGCCGAACCCTCAAAGCGTCGCAATAGTGAACTTAAAGAGCATAGAGAACATAAGGAATCCAAGGACCTTTCTTCAAGCTATGAACCTTCCGTGCCAAGCCCTTTTAGTTTGTAG
Protein Sequence
MSRSTKSDSLAKSEPSSKDMTASVNTAVHEFSGVRLPLQPYTGSHAVFMYSTASDGNVTLQLKEPDDLDRNSLAVMLARLQEDSSFSIYTQDTDILSDGGIDVLLGPGSSGENSGNDTVTASFDFFDSSSAHDLTLSPQTLSNTTEALINDNSDSLGLPADNDTVSTTTKDDGKPGRSSPDLKGKRPKTKPTSPNRQGPQQCTVCSKVFGNASALAKHKLTHSDERKYICTVCNKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHVPPSTSSSSTTMSPAQGAAAGDAASPHGSSCIQYAPPPTGSPPVKDSSKEGKSQLQQLLSTEPAKCAGRSNDGLTKEQLDLIHQIMEQTQRQNQVVSSPSSTKPSPKKKSRSKEKTVAAASSTSWSPSSQQQQCMQVKTISSGASSPQSKVTTTTPSTPSPTAQDKQPILKPVECNLCKRRFKNIPALNGHMRLHGGYFKKDPDTKKLDKKEQTGPPLQTASSSVRALIEEKIINKRNSSPSTRHVEAISHTTSATQVDMDHKHTSFVVPAPPHLVLDKHRRHSDAEALKSSKSYQEAQAIADLIVKREKICVKRTTSDPGQAAHLLQYRSDSFSLDNVEIYQDERQFVTPSLEDEVFSNNTMMIQGVDPSHLSQISFQSESLDDNLLIKDDNLLTIKEEGLLDMKNEGDEDLQELSLDDIASLHEEPMTISQQSIQIPVNQELQAVLNSPLPESLAEFSTYHSSKNLEIQSPGYPTHSPGAYARSPHTFTTQSPLQSPMIRHDSPGFAYPTPPASHEGQSPCFGQNMNVSMVSPNDDFGQMVERGIDEPPQASSPLSAAFYTSTMSSSAAVEEAIQEILPGESINEDNLYPLSNTPPSQSENDSLGLTPVPSPRVTTSMPSPHPSNTYSSSPKASSQASALPQWGSGTSATLMLPNSEDPLLSSQPKDFVLKKRIQLNGVPVRLLSNNGLIELNGGNFTGLLVDANGELKLIQTSSSGCATKNFVLSNAQLVTTSSQEIGTKDGRVKVQKLTLAKAVPNQTSTKIITTNRCKIVNEARREECNDVFLSPTTIPTSSPIKQARKRLRTEPLQLPVFHQSKLRTTRSKPQGSTRFTPQPILNPQRPGSGLYANIKYKFGEDGSTWGDPIPETDSTPHINIGPQNQCTIPTYTSVPKRMSPQPVYEDLLWDPGISSCTDSEVDMYLEFACCAAIPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPSPHLPADHPLLAYSYSESDKWTSAETELFHRCLLKFDKDFIRIAEEIKSKSVKQCIQFYYVWKKVCSDEYSRLKALRQMKRNHRNVSDSDDKPYPDVKLLGIADSESPMRNFLCEYPDCSASFNSRAALNGHIRIHGGTARNSPTPTVSDRRNATSASFSVSTTICHPDSTDQEYPCKICGKVFSKIKSRSAHMKSHRPPDAEPSKRRNSELKEHREHKESKDLSSSYEPSVPSPFSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01239540;
90% Identity
iTF_00431701;
80% Identity
iTF_00431701;