Dpon006368.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- dnajc2
- Assembly
- GCA_000355655.1
- Location
- NW:1151844-1154607[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0084 5.1 6.5 0.1 3 31 438 470 436 473 0.86 2 2 5.9e-13 3.6e-10 39.0 0.1 3 44 585 630 583 632 0.90
Sequence Information
- Coding Sequence
- ATGGGTGaagcaaaaatgaatttactTAATACCTGCCAGACTGTAGCCCTCCGTTACCGATTTCTCTATGAAAACGTGGGTGGAGGAGAGCCCCAACTTATATTTGAGCCTCATCCATTGATTGAGTTGGAAGTGGACATTCCGAAACCTACAGAGCAACCAGAAGCAGAGCTTAAACCCGAGGATGTCGACTACAATGTGGATGTAGAGTATTTAAGAAGTTTAGATCCGAAAGACTGGAAGTCGCAAGACCACTACAAGGTATTAGGAATAGAAACACTAAGATTCAAAGCATCTGAAGATATTATAAAGACAGCATATCGTAAGATAGTCTTGAAACATCATCCTGATAAGAGGAAAGCACTAGGAGAAGAAATTAAACCTGATGATGACTATTTTACTAATATTACTATGGCATATGAAACTTTAGGTACTTTGGCGAGGAGGCGGGCCTTTGATTCTGTTGACCCCGAATTTGATAATGACATACCTACTTCATCTGAACTTAAGAAGGATTTCTATgatgtatttaattattattttaacctGAACTCACGGTGGTCAGAACGCCCAAAAGTCCCTAAATTAGGAAATGAAAATTCTTCAAGAGATGACGTAGAAAAGTTTTACTCGTTTTGGTATGACTTCAAGTCTTGGAGAGAATTTTCTTATGAGGATGAAGAAGACAAAGATAAATGCCAGGATCGGGATGAAAGAAGATACgtagataaattaaataaagctgAGAGGCTGAGGAAGAAGAAAGAGGAGATGTCAAGAATACGAACGTTAGTTGACTTAGCATACAATAACGACCCAAGAATAGCTAAGTTTAGACAAGATGACAAAGATAGAAAATTGGCGGCAAGGAGAGCCAAGCAGACAGCTGCACAACAAAAGAAGGATGAAGAGGATCGCATATTGAAGGAAATCAAATTAGCAAAGGAGCAAGCAGAGGCCGCAGAGCGAGCTAGGATTGAAGCCAAGAGACAAGAAAGAGAAGTTATGAAAAAGGCTCTTAAAAAAGAGCGAAAATTGTTTCGAGATACGTGTAAAGCAAATAGCTACTTTACTGACGATTGTGATAAGAATCTTTACCACATAACCACGATTGAAGCCATTTGCGAGAGACTCACTTTAGAAGCTTTAGAagacttaaataaaaacataaaaagtaaTGGCAAATCTGCGTTCTTAAAGGCCATTGAAGATCATGAGAAGCATTTGCAAAGAGAGAAGCAAGAAGTTTTGAATGCAGCCAagcaaacaaataataaagataaaaatacaGCTGTTATTAAAATAGCACCAGAAtggaatgaagaaaatttgcaattgcttGTTAAATCTGTAAATTTATTTCCCGCTGGTACCAATCAACGTTGGGAAGTAATTgctaattttataaatcaacATGGAGTTTTTAAGAAAGATAGTAGTaaatttactgcaaaattaGTACTTGCCAAAGCAAAGGATCTTCAAAAAACCGATTTCTCAAAGAATAATCTGAAGGAgcaggcaaataaaaatgcttttgacaactttaaaaaagataaaaagGCAGTTTTGAGTGTTGCTGAAGAAGAAATATCCAAGAAACTAGAAGAAGTCAATATCAATGGCATGAATAATGGGCACCGTGAAAACTCTGTACAGGCTAATGTGGTAGAACCAAAGCCAGTTCGGGAGAAAGAAGTTAAGGAAGAAACCATTgcgaaaactgaaaaatgtgtgAGGTTTGATACATTGCCCTGGACAACAAGTGAGCAGCAGTTACTTGAACAAGCTTTGAAAACGTACTCCGCTTCCACACCAGAAAGATGGGACCGAATCGCTGAGTGCTTACCAAACCGCTCGAAAAAGGACTGTATGAAAAGATACAAGGAGCTGGTTGAAACGGTCAAGGCAAAGAAGGCTGCTAAGGCTGCTGTAAGTGCAAAGTGA
- Protein Sequence
- MGEAKMNLLNTCQTVALRYRFLYENVGGGEPQLIFEPHPLIELEVDIPKPTEQPEAELKPEDVDYNVDVEYLRSLDPKDWKSQDHYKVLGIETLRFKASEDIIKTAYRKIVLKHHPDKRKALGEEIKPDDDYFTNITMAYETLGTLARRRAFDSVDPEFDNDIPTSSELKKDFYDVFNYYFNLNSRWSERPKVPKLGNENSSRDDVEKFYSFWYDFKSWREFSYEDEEDKDKCQDRDERRYVDKLNKAERLRKKKEEMSRIRTLVDLAYNNDPRIAKFRQDDKDRKLAARRAKQTAAQQKKDEEDRILKEIKLAKEQAEAAERARIEAKRQEREVMKKALKKERKLFRDTCKANSYFTDDCDKNLYHITTIEAICERLTLEALEDLNKNIKSNGKSAFLKAIEDHEKHLQREKQEVLNAAKQTNNKDKNTAVIKIAPEWNEENLQLLVKSVNLFPAGTNQRWEVIANFINQHGVFKKDSSKFTAKLVLAKAKDLQKTDFSKNNLKEQANKNAFDNFKKDKKAVLSVAEEEISKKLEEVNINGMNNGHRENSVQANVVEPKPVREKEVKEETIAKTEKCVRFDTLPWTTSEQQLLEQALKTYSASTPERWDRIAECLPNRSKKDCMKRYKELVETVKAKKAAKAAVSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00116577;
- 90% Identity
- -
- 80% Identity
- -