Dpon001159.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dendroctonus ponderosae
Gene Symbol
SMARCC2
Assembly
GCA_000355655.1
Location
NW:3019704-3025936[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-14 9.7e-12 44.1 0.1 3 44 590 631 588 633 0.95

Sequence Information

Coding Sequence
ATGTTGTCGATAGGCCCCAAGATGGATGGTGGACctaacacaaaatattttgaaagccCTGAAACGATAAATGCCCTCGAAGGTGTAAAAAATTGGctacaaaaaaatgcgaagAAATACATCAATGATCCAATAACAAACAAGGTAATTGCTCAAACTGCTGTTCAATTCCTTCAGTTCCAGGAAGATTTTCTTGGTAAAAAGGCACAAAAACCTCCCATAACTCGAATACCTGTAAAACATTTCCTCGACTTTAAACCGGGGGGTGGTTTATGTCAGCTGTTAACAGCTGCGTTGAAGTATAAAATGGAGCAAGGGTGGAGGCGTTTTGAAATGCCTTCTGGTAAGaataatccaaagtttgagaaaatcatcgaaatgtttcaattaatggaaaaagcattgattcaaattaaattatacacaTATCCTGTGGTGTATATTGCGCCCAGCGTTGATAAAATCGTAGgtcaaaaaataaaggaaatagTTAGAAGACGAAATGGCCAGATTGTAGATACGGAAGAAAATGCGACACATATTTTATACAACATTGCGGAATCGCCTGTTGAGGAATACGGAAGGCCAGTAATACGAAGAGATAAAATGGTCTTAATGCATTGGTATTACTTTCCAGACTCTTTTGATACTTGGGTTAATTGGGAATCAATAGGTCTTGATGGTATATCAACTGATAGTCCAAGTCCTAGGACTGGTCCATGGCATATTGCATATTCTTGGGTTTTTGATACTGACCAGTATAATGAGTGGATGTGCGAGGAAGACTATGAAGTTGATGAAACGGGTAGGAAGAAAGTTCATCCGAGATTAATGTCTGTGGAAGATCTCATGAATCCATCAGATGAAAACAGTAAAAAGAAAAGAGATAAAAGGAGACGATCTCCTTCGCCTTCGTCAAAAAGCGCAAAGCGCAAAAGTGGAAGGAGCCTTGgcatatacaaaaaaaacagcagAGATGATGAACCTGAGGATCTCACAAAAGACATGGAGGATCCTTTGCCAGAAACAACTCTTACAGAAGTGCCATCATCGCCCAATAGTCAGGGGGCATTGAAAAAGGACAGTGACTCACAAGCGTTAAAAAGTGGCTCTATCACAGAACTGGATGAGTCGGAGGACAAAACTGAGGATAATTCGCAGACAGGAAAAACCAGCGACAGTAATACTCAAGATGACGGACAGGAAGATAATGTTACGGAGCAAACACACTATATAATTATTCCATCATACTCTGCTTGGTTTGACTACAATTCAATTCATGAAATAGAGAAACGGGCTATgccagaattttttaattctcgcAACAAGTCCAAATCGCCTGAAATCTACCTTGCATATAGGAATTTTATGGTGGATACATACAGATTAAATCCAACAGAATACATAACAAGCACAGCTTGTAGGCGAAACTTAGCAGGAGATGTTTGCGCTATTATGAGAGTACATGCCTTTTTAGAACAGTGgggtttaataaattatcagGTGGATAGTGATTCCAGGCCGTCTGCAGTGGGCCCACCGCCCACTTCACACTTTCATGTATTATCCGATACTCCTTCCGGATTACAACCTGGCAATGCTACCAAAACGCCACAACCCAGTGCAGCAAAAACGCTTTTAGACTTGGATAAGCCCCAAGAACTGAAGAGGGATGGGGAGCCTTTGGCTAGTTTCGGTCTAAAGCTGGaccaatattcaaaaaaaccgattgtatttagaaataaaacgGCTGCATCCTTGACTAGAGACTGGACTGAACAAGAAACCCTGCTTCTTTTAGAAGGCTTGGAAATGTATAAAGATGATTGGAATAAGGTATGTGAGCATGTAGGATCCAGAACACAGGACGAGTGTATACTGTACTTTTTACGACTGCCAATTGAGGATCCGTATATAGAAGATTCAGAGGTTGGCGGCGCTTTAGGGCCTCTAGCTTATCAACCAATACCTTTCAGTAAAGCAGGCAATCCTATTATGTCCACAGTCGCGTTTTTAGCGTCAATTGTTGATCCCAGAGTAGCTGCAGCTGCAGCCAAATCAGCGATGACTGAATTTGCCAGCATAAAAGATGAAGTTCCAGCAGCAGTCATGGATGCGCATCTGAAGAATGTCGAAGCATCTTCAGCTTCAGGCAAATATGATCCGGCCAATTTAGCCTTAACAGGCATTGCTGGAACTGCCTGCGAAAAGGAAGATGAGCCCAAGAAGGAAAAGGAAGAGGAAGCTGCTGTGGAAGCACAGGAGGAGAAAAgagaaGTGAAATTAGATCCTGATGACACAGCATCACAAAGTCCATCTGCGGAAATTAAAGTTAAGGACAGTGAAATGCAAAGTGCCGCAGCAGCAGCCTTAGCCGCTGCTGCTGTCAAAGCGAAACACTTAGCTGCCGTGGaggaaaggaaaattaaatctttGGTGGCGTTGTTAGTAGAAACtcaaatgaagaaattggAAATCAAGCTGCGTCATTTCGAAGAATTGGAAACCACAATGGAACGAGAAAGAGAAGGTTTGGAGTATCAGAGGCAGCAGCTTATTACAGAACGACAACAGTTCCATTTAGAGCAACTGAAGGCTGCAGAATTTCGAGCACGACAACAAGCTCACCAGAGgcTGCAAGCAGAGCAAGGCCAATGGCCTCCACAAAATCAGTCCTCTGCAGGCTCTAATTCCAGTGACACTGGACCAAGTACTACTCCAACACCTCCTTCTCCTCAAGCATCTGCGGTTTCTTCTCCTCAAACGCCTCCTCATCATCATATTGGGGACGGTCAAGATAGCGAGTGA
Protein Sequence
MLSIGPKMDGGPNTKYFESPETINALEGVKNWLQKNAKKYINDPITNKVIAQTAVQFLQFQEDFLGKKAQKPPITRIPVKHFLDFKPGGGLCQLLTAALKYKMEQGWRRFEMPSGKNNPKFEKIIEMFQLMEKALIQIKLYTYPVVYIAPSVDKIVGQKIKEIVRRRNGQIVDTEENATHILYNIAESPVEEYGRPVIRRDKMVLMHWYYFPDSFDTWVNWESIGLDGISTDSPSPRTGPWHIAYSWVFDTDQYNEWMCEEDYEVDETGRKKVHPRLMSVEDLMNPSDENSKKKRDKRRRSPSPSSKSAKRKSGRSLGIYKKNSRDDEPEDLTKDMEDPLPETTLTEVPSSPNSQGALKKDSDSQALKSGSITELDESEDKTEDNSQTGKTSDSNTQDDGQEDNVTEQTHYIIIPSYSAWFDYNSIHEIEKRAMPEFFNSRNKSKSPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSDSRPSAVGPPPTSHFHVLSDTPSGLQPGNATKTPQPSAAKTLLDLDKPQELKRDGEPLASFGLKLDQYSKKPIVFRNKTAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILYFLRLPIEDPYIEDSEVGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMTEFASIKDEVPAAVMDAHLKNVEASSASGKYDPANLALTGIAGTACEKEDEPKKEKEEEAAVEAQEEKREVKLDPDDTASQSPSAEIKVKDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWPPQNQSSAGSNSSDTGPSTTPTPPSPQASAVSSPQTPPHHHIGDGQDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01121544;
90% Identity
-
80% Identity
-