Dpon006384.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- F54F2.9
- Assembly
- GCA_000355655.1
- Location
- NW:393374-402423[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-06 0.0028 16.9 0.0 2 34 272 307 271 311 0.84 2 2 3.4e-10 2.1e-07 30.2 0.1 3 43 354 398 353 400 0.92
Sequence Information
- Coding Sequence
- atgaagattttctatgttttggcgttgttttctttaaatactTGTTCAGCTTGGGATTCTGATCAACTAGAGGTATTTGATGTAGTCGATGAAGTAAAGGAAAATTTCTACGATCTTCTTAACATTTCCAAAGATGCCTCTAGCTCCGAAATACGATCAGGATTTAGGGCTCTTTCTCTAAAATTACATCCAGACAAAAACTTGGATACGGACACCTCGAAAGAGTTCCGAAACTTGGTGTCCGTTtacgatattttaaaaaatcctacCAAGCGAAAATATTATGATGAAGTACTCGTTAATGGCTTGCCCAATTGGAGATCCGCAGTTTATTACTACCGATATGTGCGGAAAATGGGCATGGCTGAAGCTTGTCTCATactatttattatcattactgTTGGACAGTATATTGTTAATTGGGCTGCATactttgaaaggaaattcacTATAcaagaaattttaaagaaaaagaaaaccggaagaaaagcgaaaaattatgatgaAGATATTGAAATAGACATACCAAAGCCCTCATTTCTAGATACGCTACCATTTCAACTTCCGAAGTTAATAtggtttattattatatccATACCATCTGGTTTAGgttttattaaaacagcAGTGACTCAACATATTGAAGAAGCTACCAAACCAGCTCCTGAGCCAGTGGTAGAACCTGTTAAAGTAAAAACGGTCAGAAAACggaacaaatttattgttcCCGAAGGGccaaactttgaaattgcATCTTCAAaAGTCAGCGAAGAAAAGTCAACACATTCAACTGTACCTCCACCCATAACAGGTGGTTTGTGGACTGATGATGACCTAGATGAATTAATAAGATTAGTAAAGAAGTTTCCACAAGGATCATCAAAAAGATGGGAGAATATTGCTGAAGCATTAAGAAGGTCGATCCCAGAAGTGACATTCAtggcaaataaaatgaaagaaaatggaTATAGATTGCCATCGGAGAAGGAAGAAGACGTTATACCGttgaaagtaaagcaaaaaacgaaaaaagatGTGGACGTAGGAGATAATATAAAGAAATGGAGCCAGGTGCAACAAAAGGCTCTGGAAGAAGCCCTACCCAAATATCCAAAAGGCGTATTGGATCGATGGGATAAAATAGCAGATCATGTTCCGGGCAAAACAAAAGAGGAGTGCATGATGCGATTTAAGTTTGTAGCCGAGttactaaaaaaacaaaaagaatcCAATGAAGCTAACACAGGAGTAAGTGGTACtgaaaatacagttttataa
- Protein Sequence
- MKIFYVLALFSLNTCSAWDSDQLEVFDVVDEVKENFYDLLNISKDASSSEIRSGFRALSLKLHPDKNLDTDTSKEFRNLVSVYDILKNPTKRKYYDEVLVNGLPNWRSAVYYYRYVRKMGMAEACLILFIIITVGQYIVNWAAYFERKFTIQEILKKKKTGRKAKNYDEDIEIDIPKPSFLDTLPFQLPKLIWFIIISIPSGLGFIKTAVTQHIEEATKPAPEPVVEPVKVKTVRKRNKFIVPEGPNFEIASSKVSEEKSTHSTVPPPITGGLWTDDDLDELIRLVKKFPQGSSKRWENIAEALRRSIPEVTFMANKMKENGYRLPSEKEEDVIPLKVKQKTKKDVDVGDNIKKWSQVQQKALEEALPKYPKGVLDRWDKIADHVPGKTKEECMMRFKFVAELLKKQKESNEANTGVSGTENTVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -