Dpon009286.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- snpc-4_1
- Assembly
- GCA_000355655.1
- Location
- NW:139027-142521[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.052 32 4.0 0.0 3 17 178 192 177 194 0.93 2 6 0.023 14 5.2 0.2 22 46 258 284 251 284 0.85 3 6 3.5e-10 2.1e-07 30.1 0.2 1 43 290 334 290 336 0.94 4 6 2.2e-08 1.4e-05 24.4 0.0 2 44 344 391 343 393 0.84 5 6 7.5e-10 4.6e-07 29.1 0.0 1 45 401 445 401 446 0.96 6 6 9.1e-07 0.00055 19.2 0.0 2 45 453 498 452 499 0.89
Sequence Information
- Coding Sequence
- ATGGAGGAATCCGAAGATCTGAAGAGAATCGAGGAAATTCTGATCCAAAACAATGAACGGCAGgAGCCGGAAGACGCCGAATTTGCAGAATACAGCGGCTTTGAAGAGTCAGACACTGAAGACGATGCTTTTGAGTTTGACGACTTTGAAGTGGACAAGTGCCCCAAACCGACCACCAACCATCCCTCTGATCCCATGCAGTTTATTACTGAAGAGGAGAGGCAAACTATCAACTGCTGCACTGATCCCGAACTGAAGGAACTGCTCGTTTTGAATAGAACCAAGAATATACAACTCATGCAACTGTACAGGACGGTCAAAGACCTCCTAGGACACTGCCACTCGGACATATTGGATCTAAGGGACGCGCACCTGTTGAAGTCCTCCAACAAGACGCCCAACCCTAAAATTTGGAGATTGGGGATGCCGTACTTTAAGACAGCCGACCACTTCCCCTGTCCGAGGAATGCGGATGCCATCCGAAAGGATCAAGAGAAAGAAATCTTGGTCTATGAGTTGAGAATGTCCTACAAATGGACCCAGTCGGAGATGAACCGGCTGCTAAACGGGGTGGCGTTCCAGTACAAGGTGAACCGAGAGACTGAGCTGCTGAGCCAGATTCAGGCACTCCGGGACGTACTCAAGAAAACCAGTAAAAAGCAGGAGGTTGAGGCAACGACCCTCAAGATCCAGGAGCTGAAGGAGAAACACCAGGCAATAAGCTCGAGCAAGATCACCACGTATCCAGCTAGGGGCTGTGAGAAGTATGTGGACTGGAGGCGAATATCCGACAAGTTTCTTAGGGGCAAGTACAACGACGTCGAATGCCAAGTGTTCTGGAACACCTACTTAAACCCAGACATCAACAAAACGCGCTGGACCGACCAGGAAGTCGACCAATTGAAACAACTGGCCGTCCGCTACAACCACCAAAAATGGGACCTGATAGCTGAAGAACTCGGCAACAATCGCACTGGCTTTATGTGCTGCGTGCACTACTATCTGCAAACCGATCCGCCGAGAGTGGCCGGAAGATTCACCCCCGAAGAGGACAAACGGCTGTGCCACTTGGTCGAGAAATTCACACATGGAAACGAGGTGTCGTGGGCTCGCGTAGTGGCGCGGCACAACTTCGGACGCTCCAGGGCCCAGCTGCTTTATCGCTACAAATACTTTCTGAGCTGCAAGGACAGCATCCGAAAGGGCAAATTTACCCCCGCTGAGGATATTCTAATTCTCGTACTGGTCGACAGGTTCGGCAAGTACTTCAGCAGGTGCGCCCAGTACTTCCCCACCCGGTCGATGGTACAGATCAAGGCGCGATACACTTCAAACCTGCAGGAAAGCATTAAGAAAGGTTTTTTCACCGTGGACGAGGACAAAATCATCTTGGATTATGTCGCCGAACGCAAGAGCAAAGACTGCAACTGGAAACCTCTGGTGCCCAAGTTGAAACGATCCAGCGCCCAAATCAGACAGCGCTACAAAACCCTACGAGTATTCCTGGAAAAGCAGCCGTCAGCCGGCTTGGAACAAGCGCCGCGCCGCAAATGGACCAGCATCGATGACCAGGAATCCGAGTACCAACATCTCAGGGACATTGCCGATGAGTTCCAGCACTGCAGCCAAATCCCCACATTGGCCGACATCAAAAAGCGGCTAAAGGGCGATCGGAAATCGCAGTTGAAACCCACCGGGGCGAAGAACCGCAAACAACCCAGGATGATAACAAGTGAAAGCGTGCAAGCGGCGCTCCCCAACTTGGACGTCGACGATCTTCTAACGGACTTCTTCAGCAACGCCATGAACCGCGAGTTTGCTCATCGCGTCAAGACAATGGGACAGCCCACCATCAACGCCAGGGGCGTAGGCGAAGTGTTGTTGCTCCTGCAGGCCAAACTGCAGCTGCCGCTCAACTACAAGGAAGACCCGCGATTGGACCAAATCGACCGCGACCTACTCGACGTGATGATTTGGGACAAAGAGCCAACCAATGGGGTTTACGCGGTCGATTCCAGCGGCAGTAGGAGCGGCGATCGACCGATCCCGCCTTGCCTGAGCACCTTGTATGGCATGCGGGGACTGGTGCTGGAAAACAACACCTACAAGGCGAAGCTTGTCGAATCAAGCGCCGGCTTTGGCTGGGCAGCCCATGAAAGCCAGGTGTTATGGCGCATCAACAACCACTTGGCCACGCAAGCGGAGCCCGTTCGCAATCAACTCATAATCGATCGTGAGCTATTTGAAAACCGATTTTTCGCGATCTTCACCGTGCCGGCCATCATGTCCTCGGTGCGTCCCAACTCGTTGCTCCTAAACCGGCTGGATTTGGACGATCCCGTTCCCACCACACCCACCTATCAGAAGCGCTCGGATAAGCCTGCGAATGTTGCGAAACAAATCCGCACTAAAGCCGCGTTGAAACCAGAACTGAGCTTGGCCGAGCGCCTTAAGAGGAAGATACAGGAGACTATTAAAGAGGCGTCGCGTTCACAAGCCAAGCCGAAGCCCCAAAAGGCTCAGAAACGCGTGAAAGCGGACGCTGATTCGGAACTGGAGGATTTGCATTTGTTGGAAGAGTGCCTGGAGGATAAGGGTAGCGATGAGGACGATGTTTTCGACGAGTTTACATCGGACTGA
- Protein Sequence
- MEESEDLKRIEEILIQNNERQEPEDAEFAEYSGFEESDTEDDAFEFDDFEVDKCPKPTTNHPSDPMQFITEEERQTINCCTDPELKELLVLNRTKNIQLMQLYRTVKDLLGHCHSDILDLRDAHLLKSSNKTPNPKIWRLGMPYFKTADHFPCPRNADAIRKDQEKEILVYELRMSYKWTQSEMNRLLNGVAFQYKVNRETELLSQIQALRDVLKKTSKKQEVEATTLKIQELKEKHQAISSSKITTYPARGCEKYVDWRRISDKFLRGKYNDVECQVFWNTYLNPDINKTRWTDQEVDQLKQLAVRYNHQKWDLIAEELGNNRTGFMCCVHYYLQTDPPRVAGRFTPEEDKRLCHLVEKFTHGNEVSWARVVARHNFGRSRAQLLYRYKYFLSCKDSIRKGKFTPAEDILILVLVDRFGKYFSRCAQYFPTRSMVQIKARYTSNLQESIKKGFFTVDEDKIILDYVAERKSKDCNWKPLVPKLKRSSAQIRQRYKTLRVFLEKQPSAGLEQAPRRKWTSIDDQESEYQHLRDIADEFQHCSQIPTLADIKKRLKGDRKSQLKPTGAKNRKQPRMITSESVQAALPNLDVDDLLTDFFSNAMNREFAHRVKTMGQPTINARGVGEVLLLLQAKLQLPLNYKEDPRLDQIDRDLLDVMIWDKEPTNGVYAVDSSGSRSGDRPIPPCLSTLYGMRGLVLENNTYKAKLVESSAGFGWAAHESQVLWRINNHLATQAEPVRNQLIIDRELFENRFFAIFTVPAIMSSVRPNSLLLNRLDLDDPVPTTPTYQKRSDKPANVAKQIRTKAALKPELSLAERLKRKIQETIKEASRSQAKPKPQKAQKRVKADADSELEDLHLLEECLEDKGSDEDDVFDEFTSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -