Dpon005285.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000355655.1
- Location
- NW:767370-845344[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 1.1e-14 53.1 0.1 1 44 340 384 340 385 0.93 2 2 6.1e-19 1e-15 56.3 0.0 1 43 705 748 705 750 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGTTCTTACGCGAGATGTGTTCAACAACGCAGGAATATTAGAAGAGAACTCCAACGATGGACAAAAAATATGGTTCATATTGTCGGGTTGGAACGCATCGCTGAGGAGTTGATGGGTCGAAGGAAATGGAAAATCTACCAAGAATCCATGTCCAGAAGTTATTTGCAACCATTGAACAACAATATAAAACGTACAAACAACTCATTGTCCGACGAGGACTGTTTTCAACGATCGCAGAAGGAGAACAGCCAGCCAATAGGCAGCCCAAAAAGTATTCGGAAACAGCCGCCGGTGAAGGACATCGAGAACGGAGAGGACGCGAAAGAAGGTGTCGAGGAGGCGGCAGCGTCGCCAGAAGCCTTTGGCGGCGACGCCAACGACGACCAGAACGGCGCCGAAGAGGCGCACCTCGACTGGACGCCGCAGAACAAGTGCGTCTTCTGCGCAGACGGAGACGACAAGCTGGATAGTGAACACGCAGTCCACCACGGGGAGCTGagtCCCCGGCCATCCGACTCGGACTCATCAGACAGCGGACGTAGTGGAGACGAAGCAGACGGTCGGTCGCACTCGTCGCCCACTCCTCCACCACCCAGAATACCCGCCCAATTGCCCGGATTGCCGCCCAACATGACGTCAGTTGACGTGGCATTAGCAGTGGCGGCCCTTACGGGAGGAAATTCTGCGGGTGTCCCACCCGGCGCTCCGCCAATGCCCTTTTATGCCCCTAGTATGCTCACGCATAACTGGTATCTTGCCAATGTTGCGCGACAGTTCCAGTCAGCTACAGCCACCCCAGTGGCTGTCGAAGCCGATAAAAACAATGGCGGAGCCGAACAGCCGCTGGATTTAAGTAAAGGTTCGAGCAATGCCTCCAATAGTTCGCCTGAACCGAAAACGAACATCGGAAACAATGTTAGACTGCCGACTTTGGAAGCGAAACAGATATTCAGTTCTGATTTTAGAGCCAAGCCTCGAATGTCTGCGGTAGCAGGCAGGAGAACTTACACCGAAGATGAGTTGCAGGCGGCTCTAAGAGATATCCAGTCTGGAAAATTAGGCACGCGACGAGCAGCCGTGATCTACGGAATTCCCCGTTCCACTTTAAGGAACAAAGTGTACAAAATGGCCTTGGAACGGGAGCGCGAGTCCCATCTGAACAGTTCGACGCCTCTCAAGCTGGACGAAGATGAAGCGTTGGACGACGACAGAGAACTATCCGGCACCGAGGAGGAGAAGGAAGTCGAAAAAGCGTTGCAGGCGCCGCTACTTTCGATGACCGATATTCTGCGGTTCTCCGGCATGGAGCATCCACCCGAAGCAATCAAGCATTTCCTTCAAAAGGCGAAAGAAGGCCAAGAGGCTCGATCGTCACCTTTGGAGCAAAGTGAGGTCATTCAGTACCTCCAGGTACGAAATGCTCTGATTGCGTCGCATAATCTCCTGGCGAACCAGAAGCCGCCAGACGGCTCAGTATTAAACCACATCATTCCCGAATTAGCCAAACGGCTAATAGTGGAAGAACATCTCAAAATGCAGAACAACAATGGTGATAGTGAGAGACTTTCTAGACCTAGTCCTTCGAACTCAGTGATCACGAAAGTGGAAAAGCCATCCGAAGCAGACCAGGAACCCGTAGAATCCCCATCGAATGTGATACTTAAAATTCCGTCCTACCGACCGACGACGTCCGCGACCAGTAAAAATGGTTGCGACAACCTTTTCAGCAGAAGCAATTCCTTGGACTCGTCCAGTCGCCTGGTCTCCCCACCTGTAACCAGCGAGTCGAATTCGCCGCCCATTCTGCCAGGCAAAGGACTACTGATCAAAGACGTCATCACACAGAGCATCACCCAGAAGTTTCAGCAGAGTCTGGAAGCGCCAGTCAGACGGCCGATGCCAATGGATCTGGAATACAAAAGGGGCGGCTTCACGCCGCCCTTGAGCGGCTTGCCCTCAGTGATCAAGAGCCAACAGGAAAGCAATCGGCAGTTCCAGCAGCAACATCACCAACAACATCCACAATCCAAGCCTCAGAATCCAGGCGGACAACCGACTGGCGGCAAAGGCACCAGGCCAAAGCGAGGCAAGTACAGGAACTACGACAGAGACAGCTTGGTGGAAGCAGTGAGGGCTGTGCAAAGAGGGGAAATGTCCGTGCATAGAGCCGGAAGCTACTACGGCGTTCCGCACTCCACTCTCGAATACAAAGTGAAAGAGCGGCACTTAATGCGGCCGCGGAAGCGGGACCCGAAACCCAATCCAGTGGATGAGAAGATAGCTAGTCTGAAACAAAACGACCTCAAGATTGCTCAGGAAAAGCTGAAGCAAcagcaacagcagcagcaacaacaGCAGCAAAACGTGATTAAGCCCCCGCAACAAAAGTTTCCGGGTTCGTCATCCAACGGCATTAAGTTGCCGCTGTTTGAAGCTGCAGCTGCCGGACTTAGTCCAGCCGCGGCGGCTGGGCTGGCGCCTGGCAACTATCATTCACCGTTCCCCTTTTGGCCACATCCAGGCTTCCCTCCCAATCCCATGGCGGCGCCATTTCTCTCACCCAGCGAGTTTTTTGCCTCCCAAATGATGCAGAAGCTGCAGGAGGAGAGGGAACGGAGTTTAGGAACTCCATCGCCCCAGGGTGGGGTGACAACTCTAGTGAAAAGTGCCAGACAAATGGCTGAATCCTTGCTGGATGGGTCTGGACCCAATGGATCGTTTTTGGACGGAATAATCCGGTCCAGTTTGGAATCAGGGGTTCCCATATCCGATGAGAAGCTGCCAAGGGAGGAAAAGAACACGGCCCCTGAAAACATGTCGAATAAAGCGCTGCTAGATCAGCTGTGCCGCAATAGCCGACTAACGCCGCTACCCAAACCGACTTTAACAGACGCGAGCAGTTCAGGGGATGAATCCTACAGAAAGAGCTCTAGTCCGTTAAATTTCTCATCTACCGGAGCGAACCACTCAGTCCATCTGCAAGAAGACTCGAAGCACCGAACGTCGCCTCATTCGCATCGAGAAAGCGCGGATACGATGGCCCATCCGGTAGAACTATCAAACGACTCGACGGAATCGTCAACAACACCGGACAGGAAAAGAAGTCGCGATGAAGAATCCGTTGAACCGGAGCGGAAACATCCAAGAATCTACTTAAAGCAGGACTTGGTTAACCCGGAAAATCTCAAACCTGAGATGCTGGTGCGTTTTCGCGATCTCCTGCTTGAAAGAAATGGAGCAGGAGCAACGGCAGAGAGTACAGCAGGAAGCAGTGCCTCAGATAACGACGCACCCCAAGACTGA
- Protein Sequence
- MAECSYARCVQQRRNIRRELQRWTKNMVHIVGLERIAEELMGRRKWKIYQESMSRSYLQPLNNNIKRTNNSLSDEDCFQRSQKENSQPIGSPKSIRKQPPVKDIENGEDAKEGVEEAAASPEAFGGDANDDQNGAEEAHLDWTPQNKCVFCADGDDKLDSEHAVHHGELSPRPSDSDSSDSGRSGDEADGRSHSSPTPPPPRIPAQLPGLPPNMTSVDVALAVAALTGGNSAGVPPGAPPMPFYAPSMLTHNWYLANVARQFQSATATPVAVEADKNNGGAEQPLDLSKGSSNASNSSPEPKTNIGNNVRLPTLEAKQIFSSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKMALERERESHLNSSTPLKLDEDEALDDDRELSGTEEEKEVEKALQAPLLSMTDILRFSGMEHPPEAIKHFLQKAKEGQEARSSPLEQSEVIQYLQVRNALIASHNLLANQKPPDGSVLNHIIPELAKRLIVEEHLKMQNNNGDSERLSRPSPSNSVITKVEKPSEADQEPVESPSNVILKIPSYRPTTSATSKNGCDNLFSRSNSLDSSSRLVSPPVTSESNSPPILPGKGLLIKDVITQSITQKFQQSLEAPVRRPMPMDLEYKRGGFTPPLSGLPSVIKSQQESNRQFQQQHHQQHPQSKPQNPGGQPTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLKIAQEKLKQQQQQQQQQQQNVIKPPQQKFPGSSSNGIKLPLFEAAAAGLSPAAAAGLAPGNYHSPFPFWPHPGFPPNPMAAPFLSPSEFFASQMMQKLQEERERSLGTPSPQGGVTTLVKSARQMAESLLDGSGPNGSFLDGIIRSSLESGVPISDEKLPREEKNTAPENMSNKALLDQLCRNSRLTPLPKPTLTDASSSGDESYRKSSSPLNFSSTGANHSVHLQEDSKHRTSPHSHRESADTMAHPVELSNDSTESSTTPDRKRSRDEESVEPERKHPRIYLKQDLVNPENLKPEMLVRFRDLLLERNGAGATAESTAGSSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -