Basic Information

Insect: Dendroctonus ponderosae
Gene Symbol: ct_1
Assembly: GCA_000355655.1
Location: NW:1886438-1993008[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.9e-28 2e-24 84.6 0.0 2 72 387 458 386 463 0.95

2 4 1.7 8.9e+03 -4.0 0.0 40 57 495 512 493 514 0.83

3 4 1.3e-31 6.8e-28 95.7 0.0 3 76 795 869 793 872 0.95

4 4 1.1e-30 5.7e-27 92.8 0.0 3 75 1020 1093 1018 1097 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.9e-28	2e-24	84.6	2	72	387	458	386	463	0.95
2	4	1.7	8.9e+03	-4.0	40	57	495	512	493	514	0.83
3	4	1.3e-31	6.8e-28	95.7	3	76	795	869	793	872	0.95
4	4	1.1e-30	5.7e-27	92.8	3	75	1020	1093	1018	1097	0.95

Sequence Information

Coding Sequence: ATGATGCAGCCCACAACGGCTGCCAACGTTCCTCCAAACGGTGGTGAAATGAATCTGGAGGAAATGCAAAATATGGAATGGCTCTTCAGAAAGGAGCGGATTTATTTGTTGGCGCAGTTTTGGCAACAGaGGGCAACCTTGGCGGAAAAAGAAGTGACAACTTTAAAGGAACAATTGTCTGGCAGCAATGGCAAGACCAATTGCGAAAACAAAGACACCTCGAACATGGACAGGCAAAGCTTTGAGTCCGAAATCGCTACCAAAGACAAAGAAATTAATCATCTATTGGAAGAAGTGCAAAGACTGCAGGGCTGTATTAGTAAAATTCAAGAGTCGTCCATTGCTCGAATTACGCTTCTAGAGGAGCAACTAGAACAAAAAAGACTACACATAGTAAGATTAGAAAGTAAGTTGGACTTGTACAAAGACTACGACGAACTGAAAAGGCAAGTCACCATCCTCAAGTCTGATCTGGTGAACAATCCGCAAGGCAAAGACATCGAGCTGCTGTTAGAAAAGACGAAGATTCAGGTTCCGGAGCTGAGAGACAAAAGCCCATCGAGGGAGAGTGAAGGGGTGACGGAACATCAATCAACACTCCAGCCCCCCACCCTGCCCATCACACCCCTCAACACCCTTCCGCATCCCTTTCAAAACGTAGACGCCTTCGGGAGTCTGTTGGGTGAGGAGATCGTGTCCTCGTGGCGAAAAACGATTGAATCGCATCAAAAATCACCCGCTTTACCTTCTTCAGATGGTCTGGTGAAGAGCACCACTCCTCTACTGGAGAACAATGCGGAGAAGAGCAGCACCGCCTCCACGCCCCAGCCCTTGGACACAACGGGCCAGCACAGTCCTCATGAAAATCTGGTGAATGGCAACCCGAAGAGTCCGCACGAGGACAACAACAATCATAACAATCACAACAATAACATTCCGCTGGCGGCCACTTTTGTGAACAACTTTTTGAGGTCGGACGATTCCCTCAAAAGTCCGTATCGATTCGACGAGCATCGGTCGCAGTTTAAATTCGCCGAAGATTTGGGAATGGCACCCGGATCGATGGTGGGTCGATTGGGGGAGAGTTTGATCCCCAAAGGGGATCCCATGGAGGCCCGGCTGCAGGAGATGCTGCGATACAATATGGACAAATATGCTTCGCAGAATCTGGATACTCTTCATATAGCCCGAAGGGTGCGAGAACTGTTGTCGATCCACAACATAGGCCAAAGACTGTTTGCCAAATACGTCCTGGGGCTTTCGCAGGGAACAGTTTCGGAACTTCTGTCGAAGCCCAAGCCCTGGGATAAGTTGACGGAAAAGGGCCGAGACAGCTACAGAAAAATGCATGCTTGGGCCTGCGATGAAAATGCCATTATGCTGCTGAAGAGCTTGATACCAAAGAAAGataatttttcatcCTCAGGAAAAGACGGATCCATCCCGTTCGGCCGACCCGAATCGGACTTTAACGAAGAACGACTAGCTCACATTCTGACCGAAAGCAATCCATTCGCTCAAATCAAAACTGAATCAGACACTCACAGCAATGAGGACTCAAAGTCGCCTCACGGCTGCAGCAGTCCCTTCTCCAAAGACTCCTCATTGAACAAAAGGCTGAAGAAGTACGAAAACGACGACATCTCACAGGAGAAAGTTGTGCGGATTTACCAAGAGGAGTTGGCCAAGCTGATGGGACGCCGAATGGAGGACATGCGGTCTCCCAGAGAAGGATTTCCAGCGGGTATTTTCCTACCTCAATTCTTTAGCAGCAACCCGATGGACCGATCGGACGAGATCAGAATGGCGTTGGATGCTTATCATCGGGAAATTGccaaattgaaccaaaatcaAGCGCCAGGTCAAATCCCGTTAGGGCTTCTGGCGCTCCAACAGCAAGCGTTGGCGCAACATCAGCAGAACCAGCAGCAAAATCAACATTCCCTGCAAGGAGGGACAGGATGTCAACCAATGGGGCAGCAGGTCTTTCAGAGCTCAAACGGAGGCGTTCAAGATCTATCGCTGCCAAAGGACAAAATGAAGCTGATGAACGGGATGGATGACATGAAGGAAAAAGACGAAGACTCCATGTCCAGACACTCTGGAAGCGCTTTTAGCCTAGTGAGACCGAAGCTGGAGCCGGGAACTGGAGCGAGTGGAAACAGCACTGCTTCCAGTCCCTTGGGAAATGCCATTTTGCCTCCCATGACGCCCACCAGCGAAGATTTCACTGcATCGTCGGCAGCTTCGCCCTTACAAAGAATGGCATCGATCACCAACTCTTTGATCTCGCAACCGCCGAGCCAACCGCACCACACCAGCTCTCAACGTCCTCTCAAAGCCGTCTTACCTCCTATAACTCAACAACAATTCGATCTctacaataatttaaacacCGAAgatattgtcaaaaaagtcAAAGAACAACTTAGCCAGTATTCGATATCTCAGCGTCTCTTTGGAGAAAGCGTATTAGGCCTCAGTCAGGGTTCAGTAAGCGACTTGTTGGCAAGACCGAAACCGTGGCATATGCTTACGCAAAAAGGCCGCGAGCCGTTTATAAGAATGAAGATGTTTTTAGAGGATGGTGATGCAGTTCATAAGTTGGTAGCCAGCCAATATAAAATTGCACCTGAAAAATTGATGCGGACAGGTGGATATGGCAACGCCTGCGCGACACCTCTGTCGAAGCCAAATCTTCcagcaaatcaaaaaattctcTCGGAGGCCGCGGGCTTATTAAGCAAGATCCAACAGGACTCGCAAAATGCTCTTCTCCCAGCGTCCCTCCAACTAGGACCTCCTCAGGTGGTTCAACCTCAACCCACTCCTTTAGGTCCACCCAACGCCGCTCAAATGCCACAAGCTCAATTGCTAAATCACCTCGGTCTTCCTCCACACCATGCCATCGCTTTACAGAACCAGGAGCTGTTGAAGAAGCAGCAAAGTATGCAAGCAGGTCATGGAATTCCCACACATTCCCCCATGAGCCATCAAAGCATGCGCAACATGCACCAGCACATGAGCCCCAGCGTGTATGAGATGGCAGCCTTAACTCAAGACCTGGACACTCAAGTGATCACCACCAAAATTAAGGAAGCTCTGCTGGCGAACAATATTGGACAAAAGATATTTGGCGAAGCCGTTCTAGGCCTGAGTCAAGGCTCAGTTAGTGAACTGTTGTCCAAGCCTAAGCCTTGGCACATGTTGTCGATCAAGGGCAGGGAGCCGTTCATTCGGATGCAATTATGGTTGCAAGACACTCACAATGTCGACAGATTGCAGGCTTTGAAAAACGAACGGCGTGAGGCGAATAAGAGACGACGCAGCTCAGGTCCTGGCCACGATAATTCCAGCGACACGTCCAGCAATGATACCTCAGAGTTCTACCATTCGAATAGTCCAGGCCCGCAAGGGCCCACCAGTGCCAAAAAACAACGCGTACTCTTCAGTGAGGAGCAAAAAGAGGCTCTTCGTCTAGCCTTTGCTTTGGATCCGTACCCAAACGTGGCTACCATCGAGTTTTTGGCACAGGAGCTGAGCTTGAGTAGCAGAACGATTACCAACTGGTTCCACAATCACCGCATGAGACTGAAACAACAAGTACCACACGCCATACCCTCAGACATTCCTCCCCGCGATCAGAACTCTTCGCAGCAACCTTTTGATCCTGTACAATTCAGAATGCTTTTAAACCAAAGACTTATGGAACTGAGCAAGGAGCGGATGGGCTTGGCTGGAGTGCCACTGCCTTACCCTCCATACCTTGCGGCCAATACCAGCCTGGCGGCGCTCATTTCCAGAGGGTTGCTACCAACTGGAGACCTTGGGGATTTATCAGCACTAAACAATGCCGTGAAGGAACAAATGAGTGGGCTTGATCTCAGTATGACTTCCCTTAAACGCGAACCGAACGAGTTTGAGGACGAAGACGATGTTGAATCGAATGTCGGTTCGGAAGACTCGAATAACTCCGGTAGCTTACAAGAGGACGCGAAGAATGACGTTGGCAAGGAAACTAGCATATCTAGTACAAATCAAAATCAGGGAAGATCTTCCAGGAGGAAACCAGCTGCTCCAATGTGGGTGAATCCGCATTGGGAAGAGGAGAAAAACTCGCACACCCAAGAAAAAGGCCAAAGCAATCAAGATGAAGTCATTATCAATGGGGTCTGTGTGATGCAAACAGACGACAATTATGCCCCTCGGCGAGCCTCAGCTGAAGAAACTGTGCGAGTGGAACCGCAAGCGGTTTTGGACCGATATGAAGATGACCGAAGTGATACGAGCAGTGTGAGCCATGAAGAACATCCGGTTCAATCGCATGAGAGTGAGCGGCTCAATAGACTCAATGCTGAACCACCGGAACGTGAAAATCATATCAATGATATCAATGAACccgaaagagaaaataacaGTGAACGTAAAGAAGTTAAAACCGAAGTTGAAGATGAAAGATGGGAGTATTGA
Protein Sequence: MMQPTTAANVPPNGGEMNLEEMQNMEWLFRKERIYLLAQFWQQRATLAEKEVTTLKEQLSGSNGKTNCENKDTSNMDRQSFESEIATKDKEINHLLEEVQRLQGCISKIQESSIARITLLEEQLEQKRLHIVRLESKLDLYKDYDELKRQVTILKSDLVNNPQGKDIELLLEKTKIQVPELRDKSPSRESEGVTEHQSTLQPPTLPITPLNTLPHPFQNVDAFGSLLGEEIVSSWRKTIESHQKSPALPSSDGLVKSTTPLLENNAEKSSTASTPQPLDTTGQHSPHENLVNGNPKSPHEDNNNHNNHNNNIPLAATFVNNFLRSDDSLKSPYRFDEHRSQFKFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKDNFSSSGKDGSIPFGRPESDFNEERLAHILTESNPFAQIKTESDTHSNEDSKSPHGCSSPFSKDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGRRMEDMRSPREGFPAGIFLPQFFSSNPMDRSDEIRMALDAYHREIAKLNQNQAPGQIPLGLLALQQQALAQHQQNQQQNQHSLQGGTGCQPMGQQVFQSSNGGVQDLSLPKDKMKLMNGMDDMKEKDEDSMSRHSGSAFSLVRPKLEPGTGASGNSTASSPLGNAILPPMTPTSEDFTASSAASPLQRMASITNSLISQPPSQPHHTSSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDGDAVHKLVASQYKIAPEKLMRTGGYGNACATPLSKPNLPANQKILSEAAGLLSKIQQDSQNALLPASLQLGPPQVVQPQPTPLGPPNAAQMPQAQLLNHLGLPPHHAIALQNQELLKKQQSMQAGHGIPTHSPMSHQSMRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLQDTHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTSEFYHSNSPGPQGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAQELSLSSRTITNWFHNHRMRLKQQVPHAIPSDIPPRDQNSSQQPFDPVQFRMLLNQRLMELSKERMGLAGVPLPYPPYLAANTSLAALISRGLLPTGDLGDLSALNNAVKEQMSGLDLSMTSLKREPNEFEDEDDVESNVGSEDSNNSGSLQEDAKNDVGKETSISSTNQNQGRSSRRKPAAPMWVNPHWEEEKNSHTQEKGQSNQDEVIINGVCVMQTDDNYAPRRASAEETVRVEPQAVLDRYEDDRSDTSSVSHEEHPVQSHESERLNRLNAEPPERENHINDINEPERENNSERKEVKTEVEDERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443834;
90% Identity: iTF_00431366;
80% Identity: iTF_00431366;