Basic Information

Gene Symbol
Xbp1
Assembly
GCA_000355655.1
Location
NW:6696-86469[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-15 5.2e-12 44.8 12.1 2 64 44 106 44 107 0.96
2 2 0.00034 0.21 10.9 1.3 33 57 89 113 86 115 0.90

Sequence Information

Coding Sequence
ATGACGTCCACAGTGCTACCAGTGCCGGCCATTCTGAGCATTCTGAGCGACAGCAACTACCTTCTGGATCAGACTGCCGATGGGCAGATGCAGCGGGCGAAGAAGCGCCGTCTGGACCATCTCTCCTGGGAGGAGAAGATCCAGAGGAAaaaactaaAGAACCGAGTGGCGGCGCAAACGTCGCGCGATCGCAAAAAAGCCAAAGTGGAACAGATGGAAACCGCCATCCAGCAGCTGTTCAACAAGAACGAGACGCTGATTGGTGAATGCGACCGCTTGCGGGCGACCAATGAGCGCCTGCTGGCCGAGAACAGCGAACTGCATCGTCGCCTACAGGAAACGCCCCCCTGCCAATGCCAGAGCCGGACTGTCGTGTGCGCGCCCGAGAGTGGATCAACCGAGTCCCTCCTTCGGCCGAAAGGAACGAGCGCCTACTCAGCAGCGGCTCTAGCAGACGCGCGGAAGCGCCACCTGTTGAGGACAGTCCTGATTTGCCTTCTCTTCCAGAGCTGCTTGACCAGCTGGAGTCGGACACGGTCGACCTCAACGCGCTCGAGCACTTCACTCAGACCCTACTCGAGGACATTGCCCGAGATCTGGAGAACGCTGCTCAGAAGACAACCGATCAAATCTGTTGGCCAGTGTGTTGAGTTAATTAGTAATGCGCCTTTTATCCAGAGGACCAGGAAGCTGTTCCAGACAAAATGGTGGGGGCGCCAGCAAAGCAGCTGGAACCCAGTGGCGGCGCAGCCGTAG
Protein Sequence
MTSTVLPVPAILSILSDSNYLLDQTADGQMQRAKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKVEQMETAIQQLFNKNETLIGECDRLRATNERLLAENSELHRRLQETPPCQCQSRTVVCAPESGSTESLLRPKGTSAYSAAALADARKRHLLRTVLICLLFQSCLTSWSRTRSTSTRSSTSLRPYSRTLPEIWRTLLRRQPIKSVGQCVELISNAPFIQRTRKLFQTKWWGRQQSSWNPVAAQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-