Dpon001952.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- Xbp1
- Assembly
- GCA_000355655.1
- Location
- NW:6696-86469[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-15 5.2e-12 44.8 12.1 2 64 44 106 44 107 0.96 2 2 0.00034 0.21 10.9 1.3 33 57 89 113 86 115 0.90
Sequence Information
- Coding Sequence
- ATGACGTCCACAGTGCTACCAGTGCCGGCCATTCTGAGCATTCTGAGCGACAGCAACTACCTTCTGGATCAGACTGCCGATGGGCAGATGCAGCGGGCGAAGAAGCGCCGTCTGGACCATCTCTCCTGGGAGGAGAAGATCCAGAGGAAaaaactaaAGAACCGAGTGGCGGCGCAAACGTCGCGCGATCGCAAAAAAGCCAAAGTGGAACAGATGGAAACCGCCATCCAGCAGCTGTTCAACAAGAACGAGACGCTGATTGGTGAATGCGACCGCTTGCGGGCGACCAATGAGCGCCTGCTGGCCGAGAACAGCGAACTGCATCGTCGCCTACAGGAAACGCCCCCCTGCCAATGCCAGAGCCGGACTGTCGTGTGCGCGCCCGAGAGTGGATCAACCGAGTCCCTCCTTCGGCCGAAAGGAACGAGCGCCTACTCAGCAGCGGCTCTAGCAGACGCGCGGAAGCGCCACCTGTTGAGGACAGTCCTGATTTGCCTTCTCTTCCAGAGCTGCTTGACCAGCTGGAGTCGGACACGGTCGACCTCAACGCGCTCGAGCACTTCACTCAGACCCTACTCGAGGACATTGCCCGAGATCTGGAGAACGCTGCTCAGAAGACAACCGATCAAATCTGTTGGCCAGTGTGTTGAGTTAATTAGTAATGCGCCTTTTATCCAGAGGACCAGGAAGCTGTTCCAGACAAAATGGTGGGGGCGCCAGCAAAGCAGCTGGAACCCAGTGGCGGCGCAGCCGTAG
- Protein Sequence
- MTSTVLPVPAILSILSDSNYLLDQTADGQMQRAKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKVEQMETAIQQLFNKNETLIGECDRLRATNERLLAENSELHRRLQETPPCQCQSRTVVCAPESGSTESLLRPKGTSAYSAAALADARKRHLLRTVLICLLFQSCLTSWSRTRSTSTRSSTSLRPYSRTLPEIWRTLLRRQPIKSVGQCVELISNAPFIQRTRKLFQTKWWGRQQSSWNPVAAQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -