Basic Information

Gene Symbol
fap1
Assembly
GCA_010014985.1
Location
JAAAKR010000990.1:15047-18898[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.22 5.8e+03 -1.1 0.9 4 10 416 422 415 422 0.95
2 13 2.6e-05 0.67 11.5 14.2 4 19 431 446 429 446 0.93
3 13 2.3e-08 0.0006 21.3 12.7 1 18 486 503 486 504 0.97
4 13 0.00013 3.3 9.3 7.7 1 14 559 572 559 579 0.92
5 13 6.8e-07 0.018 16.6 14.5 1 18 624 640 624 641 0.97
6 13 0.21 5.4e+03 -1.0 0.1 9 13 658 662 656 663 0.86
7 13 0.00022 5.7 8.6 7.8 1 14 679 692 679 692 0.96
8 13 0.78 2e+04 -2.8 1.3 4 10 720 726 719 726 0.91
9 13 2.3e-09 5.9e-05 24.5 14.6 1 19 732 750 732 750 0.98
10 13 2 5.2e+04 -7.9 8.4 10 19 798 809 789 809 0.68
11 13 0.81 2.1e+04 -2.9 0.7 5 10 834 839 834 842 0.76
12 13 5.8e-06 0.15 13.6 11.8 1 18 845 867 845 868 0.92
13 13 0.075 2e+03 0.4 13.0 1 19 878 899 878 899 0.92

Sequence Information

Coding Sequence
ATGACCTTCAATCCAGCTTCAAAATcgcctcttcttcttcttctctctctttcttcCCTTCCATCGTTTTCTCTCAACTTCACTCGTTCGCCTCCGGGCTTCTATATCATCCTTGATTTTGTTTCCAAGCTTCAGACGGTCATATCTGGAGGAGGAGAGGGAGAGAACTCGCCAATCCTCAAATCCACGAACCCGGTGTCAACCTTGACCAGCTTGATTGATATTGATCGACAAGGATTCCATAACCGCATGAGCACATCTCAACAGCTTCCTCGATTTCCTCACACCCCCGAGATCATGTCGGGTCCTCCTGCCGCCGTCGCGGACAATAATCACACTACCCCGCGCCCCAGACGGAGAGGTCGTGGCAACCGTGGCGCTCATCGACAGAACAACAATCAGACACAGACGCAGGCACAACCACCGTCAGATGCACAAGCGAGCGCGCCTCCGCCAGAACCTTCCGGTGAGGCTCCAGCCACCAATCCCCGCGATGCGCCACGCCAGCGGAGGGGTCCGAGAGGTGGCGGTAGAGGGGGAGGGGAGAGGGGAAGAAGAGGATCCCGTCCGGATGGTGAAAGTCGACGACGACAAGGAAgaggcggtggtggtggtggggcACCTGGGTCTCGACGGGCTGCAATGGGAGGACGCACATTCGAAGGCCGATTAACGAGACCGGAAGGGAATACCGCGGAGGAAGCGGGCGATCCCAACGACCAAGGGTTGAGGGCTGATGCGCCTGTTTTTGTACCCGGTACACAGCCCAATGGAGAAGGGGCGTCGAAAGGACCACCACAACCGTCGAATACTACGTCTACGAAGGATCACGATTCAAAAGGAAAGGGGAAGGCGAAGGCGAAGAATCCCCCACCGCGAACCCCGAAAGTTACGACAAAGTCCGTTGCTCCGGATATTGGTACCCGGATTCACGAAGATATCCTGCATAACCTTTACGAGTGTCCTATCTGTACCAGCGAGCTAGGTCGAAAGTCGCGGATTTGGTCGTGTGGGCTATGCTGGACGGTTTTTCATTCGAGTTGTATCAAGAAATGGTCGAAGAACGAAGGTGCCGCAGCGCAGGATGCAGCGCGTCGACAGCAGGAGGAGTCGACTGGAGAGGTGACTACTCCCCGCGCGTGGCGTTGCCCTGGCTGTAATCTTGCACAGGAGGTATTCCCTTCAGCATACACCTGTTGGTGTGAAAAAGAAGTCGATCCACGTCCACTACCTGGTTTGCCTCCCCATTCGTGTGGCCAGACTTGCTCGCGACCTCGTAAGGGGTGTCCACATCCATGCGATTCGATTTGTCACGCGGGCCCCTGTGCACCATGTACGGCCATGGGTCCGACGCAAGACTGTTTCTGTGGTATGAATTCTTCCACCAAGCGATGTCAATATACCGACTATGAGAACGGATGGAGTTGTGGTGAGGTCTGTGGTGACTTGCTGCCGTGTGGTGAACATACTTGCGCTCGACCGTGTCACGAGGGTTTGTGTGGTGCTTGTGATGCCAAGGTCGAGGCACGTTGCTATTGTGGTAGCGTGGAGACGGAAATGCTATGCAGTGCCAAGGATGAGGAGATGGATAGTGAGATGGTGCGCGCTGATGGCGAGATCGATAGTTGGACTGGTTGTTTTGGCTGCGGAGAACTCTGCAGTCGTCCTTTTGATTGTGGTGTTCATTTTTGTCAGAAGACCTGCCATCCTCAAGATGCACAATCTGCGCATTGTCCAAAGTCGCCCGATGTGGTGCTTGACTGCCCCTGTGGTAAGACGCCATTGACGAAGATTCCCGGATATTCTCCACGAACATCCTGCGAGGACCCCATCCCCCACTGTCTCGAAGCGTGCGGCAAGAGCCTACCGTGCGGACATCCATGCGAAAAGATCTGTCACACTGGCCCTTGTGGTGCGTGTATGCGCCGGGTTGAAATCTCCTGTCGCTGTGGCCGCAACACCATGATGACCGTGTGCCACCAAGGCACCACCGAGCAACCGCATTGCTTCCGCATGTGCAAAGCAGGCTTACACTGTGGCCGGCACTCGTGCGCGGAGCGCTGCTGCTCCGGTGAACAAAAGGCGATTGAACGCCAGGCCATGCGGCGAAAGCTCAGGTCTCATCTCCGTCCGAGTGATGAGGACGTGGAGGCCGAGCATATCTGCACCCGGATCTGTGATCGGACGCTGAAATGCGGAAGACACACCTGTCCGGAGATCTGCCACAAAGGACCGTGTAATACCTGCAGGGAGGCGATCTTCGAGGAGATCTCGTGTAATTGTGGACGATCGGTCTTGTATCCGCCACTACCCTGCGGGACGCAGCCGCCGTCGTGTTCGTTCCCCTGTGAACGGCCCAAACCGTGCGGCCATCCTCAGACGCAACACAATTGCCATGCGGATGAGGAGAACTGTCCGAAGTGTCCGTTTTTGACCGAGAAGACGTGTCTCTGTGGCAAGCGATCATTGAAGAATCAACCCTGCTGGCTGGCAGATGTTCGCTGTGGGCAGGTTTGCGGAGAAGGCCTCAAATGCGGTTCTCACACGTGCAAGAAGAATTGCCATCGACCTGGCGATTGCGAAGATACTTCCCGGCCCTGCCAGCAAGCATGCGGAAAGCGCAAGACGATGTGCGGCCACCCGTGTACCGATGCCTGCCATGCTCCGTACCCATGTCCCGAGAAGACGCCCTGCTCGACCACAATCACGGTAACATGTGGCTGTGGTCGACTCCGTCAGGAGCGACGCTGTAACGCAGCCAAGGCAGTGGCTTCGAAGGGACAGGTGCAGCAGCCGCAGAGACCACCCGCGGTGACGCCGTTGAGCTGCGATGAGGAATGTTCTCGTCTGGAGCGGAACCGCTCATTAGCATCCGCCCTAGGTGTCGAGATTAACCCGTCGACGACCGTCGCGCAGAACGGAGAACCCGCTATCCCTTATTCCTACGAAACCCTCGACATGTACATCCAGCTGTCTTCTTCGGCGCCTCTATCCATTCTGCAGACGTACGAATCTACTTTACACGCCCTAGCAACGAACCCAACACAACGCTCTCACCGCTTCCAACCCGCCAAACCCTCCCTTCGCGCTTTTACCCACTCCCTCGCGGCAGACTGGGGCTTCGCCACAGAAGGCTTCGACCCAGAGCCCCACCGCCATGTCTTCGTCCTCAAACCGGCCGCCTGGAATCCACCAGTGTTCGGCACCGGCAACGGGACAGCAGCCATCGGCATCGGCGGGATGAGCGTTGGCGAGTGCGTCAAACTCCGCGAACGCCAGCGGATGAAGGAGCGCGAGGCACAGCGCGTCGCTGCAGTGGAAGCCAAAGCGTCGCGGGATGCTGCGAAGGCTTCCTCGAATGGTTCTTCGTCTGCAGGTGATGGATGGGCGCAGGTAGCAGCTTCATCGCGTAAGGGCGCTGGCTCCAGTGCAGCTACTCCTGGCTCGCGAAGCGGCACGGCTACACCTGGGTATGGTCAGAGTGCACCATTCTCCGGGTCGATGTTTGCTGCTCtcgctggtggtggtggtggtgatgctgGTGCTGGTACTGCGGCGGGGCCGGGACCTAAGAAGGAACGACTGGTTCTCCGGTCTGGTGTTGGGACTGGGAAGCAGTTGAAGAGTCAAGCACCGCCGGCGGAACCTATTGCGGATAGTTGGGAGGAAGAAGTCGAGAAGGAGGAGAAGGAGGAGCAGCGGGAGCGGGAGAAGGGGTCTGATATGAGTCACGGTGGTGTGGAGGATGGTCATGATGGAGCTGAGCAGGGACCGGAGAATAAGGCTGAGCATAGGCCTGAAAACGGAGCTGGAGCTGAAGTTCGAGGTGATACTATGACTGAAGCTGCATGA
Protein Sequence
MTFNPASKSPLLLLLSLSSLPSFSLNFTRSPPGFYIILDFVSKLQTVISGGGEGENSPILKSTNPVSTLTSLIDIDRQGFHNRMSTSQQLPRFPHTPEIMSGPPAAVADNNHTTPRPRRRGRGNRGAHRQNNNQTQTQAQPPSDAQASAPPPEPSGEAPATNPRDAPRQRRGPRGGGRGGGERGRRGSRPDGESRRRQGRGGGGGGAPGSRRAAMGGRTFEGRLTRPEGNTAEEAGDPNDQGLRADAPVFVPGTQPNGEGASKGPPQPSNTTSTKDHDSKGKGKAKAKNPPPRTPKVTTKSVAPDIGTRIHEDILHNLYECPICTSELGRKSRIWSCGLCWTVFHSSCIKKWSKNEGAAAQDAARRQQEESTGEVTTPRAWRCPGCNLAQEVFPSAYTCWCEKEVDPRPLPGLPPHSCGQTCSRPRKGCPHPCDSICHAGPCAPCTAMGPTQDCFCGMNSSTKRCQYTDYENGWSCGEVCGDLLPCGEHTCARPCHEGLCGACDAKVEARCYCGSVETEMLCSAKDEEMDSEMVRADGEIDSWTGCFGCGELCSRPFDCGVHFCQKTCHPQDAQSAHCPKSPDVVLDCPCGKTPLTKIPGYSPRTSCEDPIPHCLEACGKSLPCGHPCEKICHTGPCGACMRRVEISCRCGRNTMMTVCHQGTTEQPHCFRMCKAGLHCGRHSCAERCCSGEQKAIERQAMRRKLRSHLRPSDEDVEAEHICTRICDRTLKCGRHTCPEICHKGPCNTCREAIFEEISCNCGRSVLYPPLPCGTQPPSCSFPCERPKPCGHPQTQHNCHADEENCPKCPFLTEKTCLCGKRSLKNQPCWLADVRCGQVCGEGLKCGSHTCKKNCHRPGDCEDTSRPCQQACGKRKTMCGHPCTDACHAPYPCPEKTPCSTTITVTCGCGRLRQERRCNAAKAVASKGQVQQPQRPPAVTPLSCDEECSRLERNRSLASALGVEINPSTTVAQNGEPAIPYSYETLDMYIQLSSSAPLSILQTYESTLHALATNPTQRSHRFQPAKPSLRAFTHSLAADWGFATEGFDPEPHRHVFVLKPAAWNPPVFGTGNGTAAIGIGGMSVGECVKLRERQRMKEREAQRVAAVEAKASRDAAKASSNGSSSAGDGWAQVAASSRKGAGSSAATPGSRSGTATPGYGQSAPFSGSMFAALAGGGGGDAGAGTAAGPGPKKERLVLRSGVGTGKQLKSQAPPAEPIADSWEEEVEKEEKEEQREREKGSDMSHGGVEDGHDGAEQGPENKAEHRPENGAGAEVRGDTMTEAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01497064;
90% Identity
-
80% Identity
-