Dpas007270.1
Basic Information
- Insect
- Delias pasithoe
- Gene Symbol
- fap1
- Assembly
- GCA_010014985.1
- Location
- JAAAKR010000767.1:45978859-45982428[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.2 5.3e+03 -0.9 0.9 4 10 305 311 304 311 0.95 2 12 0.00023 6.1 8.5 12.0 4 18 320 334 318 335 0.92 3 12 5.1e-08 0.0013 20.1 12.1 1 18 375 392 375 393 0.97 4 12 0.0015 40 5.8 7.5 1 14 449 462 449 469 0.90 5 12 8.1e-08 0.0021 19.5 13.2 1 18 514 530 514 531 0.97 6 12 0.38 9.9e+03 -1.8 0.1 9 13 548 552 547 553 0.85 7 12 0.059 1.5e+03 0.8 6.9 1 11 569 579 569 580 0.94 8 12 0.39 1e+04 -1.8 1.4 4 10 586 592 585 592 0.92 9 12 2e-09 5.3e-05 24.6 14.6 1 19 598 616 598 616 0.98 10 12 2 5.2e+04 -8.4 8.5 10 19 664 675 655 675 0.63 11 12 1.8e-06 0.048 15.2 10.4 1 18 711 733 711 734 0.92 12 12 0.065 1.7e+03 0.7 15.8 1 19 744 765 744 765 0.95
Sequence Information
- Coding Sequence
- ATGTCTGGTCCTTCTGCGGCTGCCGCGGACAATAGCAATCATAACCCGCGTCCCAAGCCCTCCAGACGTGGAGGTGGGAGGGGCCGTGGCAATAATCGTGGCTCGAATCGACACAACAACCAGGCACAAACACAAGGACAGTCACAGTCGACAGATGCCCGAGCACAAGTGCAAGCACCCATGCAACAGTCCGGAGAGGCTTCTTCAGCGAACGCTTCTGGTGATGCGGCACCACGCCAGCGGAGAGGTCCAAGAGGTGGAGGGAGAGGACCCCGTCCGGATGGTCGACGACGGGAACAGGGACGAGGAGGCGAGCCGGGACCTGCACCACGACGAGCTGGAATTAGTGGACGGATGTTCGAGGGGCGGTTGACGAGGCCGGAAGGGAACACTACGGAGGGAGCAGATAGTTTGAATGACCCAGGATTGAGGGCTGATGCGTCTGTATTTGTACCTGGTGGGAAACCGGATGGAGAGACAGCGTCGACGACGTCTACGAAATATCATGGTTCGAAAGGGAAATCAAAATCTAAGAACCCTCCGCCACGGCCGAAAGTTACAACAAAATCTGTTGCCCCTGGTATCGCTACTCGGATTCATGAGGATATACTCCATGCTTTGTACGAGTGTCCGATTTGCACTGGTGAACTTGGACAGAGGTCGCGCATTTGGTCATGCGGGCTGTGCTGGACGGTGTTCCATTTGAGCTGTGTCAAGAAATGGTCGAGGAATGAAGGATCAGCAACCCAGAATGCTGCGCGTCGACAGCAAGAAGAGGCAACTGGGCAAGCTAGTGCACCTCGCGCCTGGCGTTGTCCCGGTTGTAATCTCCCTCAGGAGATATTTCCTTCGGCCTACACGTGTTGGTGTGAGAAGGAAGTCGATCCACGTCCATTGGGTGGACTGCCTCCGCATTCATGTGGGCAGACCTGCTCGCGGCCTCGTAAGGGCTGTCCTCATCCATGCGACTCAATTTGCCATGCCGGTCCTTGTGCACTGTGTACGGCTATGGGTCCCACGCAGGATTGTTTTTGTGGTAGAAACTCCTCCACAAAGCGTTGTCAGGATACGGACTACGAGAATGGGTGGAGCTGTGGTGAGATCTGCGGTGACTTGCTGCCCTGTGGTGAGCATACTTGTTCTCGACGGTGCCACGAAGGTCTCTGCGGTGCCTGTGATGTCAAAGTCGAGGCACGTTGCTACTGTGGAAGTGTGCAGACTGAAATGCTATGCAGTGCAAGGGATGAAGGGGAGGATAGTGAGAGACTACGTGATCCATCAGGTGATGTCGAAAGTTGGACGGGCTGTTTTAGCTGTGGAGAACTCTGCAATCGCCCATTCGACTGCGGTGTTCATTTCTGCCAGAAGAACTGCCATGCTCAGGATGCACAGCCCGCACATTGTCCGAGGTCGCCTGATGTGGTACTTGATTGCCCATGTGGAAAGACGCTGTTGACGAATATTCCCGGATACTCACCCCGAACATCCTGTGAGGACCCGATACTTCATTGTCTTGAAGCCTGTGGAAAGACATTGCCATGTGGACATTCATGCGAGAAGATCTGCCATACCGGCCCTTGTGGTGCCTGTATGCGTCGAGTTTCGATCTCCTGCCGCTGTGGCCGTAACTCCATGATGACTATTTGCCATCAGGGTACTATCGAGCAGCCGCAGTGTTTCCGTATGTGCAAAGCAGGCTTGCACTGCAGTCGTCATTCGTGTGCTGAGCGATGCTGCACCGACGTGGAGGCCGAACACATCTGTACTCGGGTGTGTGGACGGACGCTGAAATGCGGAAGACATACCTGTCCGGAGATCTGTCACAAGGGACCGTGCAATACCTGCAGAGAGGCGATATTTGAAGAGATCCCGTGTAACTGCGGTCGATCTATCTTGTATCCGCCGTTGCCCTGCGGGACGCAGCCCCCGTCATGCTCGTTCCCATGCGAACGGCCCAAGCTGTGCGGCCATCCTCAGACACAACACAACTGTCACACGGACGAGGAGAGTTGCCCGAAGTGTCCGTTTTTGACGGAGAAGTTGTGTCTCTGTGGCAAGCGGACATTGAAGAATCAGCCTTGCTGGTTAGCCGATGTACGCTGTGGCCAGATTTGCGGCGAACCGCTCAAATGCGGCTCACATACGTGCCAGAAGAATTGCCATCGAGTGGGTGATTGCGAGGATGACTCAAGACCATGCCAGCAAGCATGTGGAAAGCGCAAGACGCTGTGCGGTCACCCGTGTACCGATCCCTGTCACGCTCCATACCCATGTCCCGAGAAGACGCCCTGCCCGGCCATGGTCACGGTAACATGTGGCTGTGGGCGGCTTCGCCATGAGCGACGCTGCAATGCGGCCAAGGCGGTAGCGTCCAAGGGACAAATCCAACAACCCCAACGATTCCCGGCGGTGACCCCATTGACCTGCGACGAGGAATGTGCGCGTCTCGAACGAAACCGCTCCCTGGCGTCTGCATTGGGCGTCGAAATCAACCCAAGCACAACCACTActcccgccgccgccgccgcaaaCCTCCCCTATTCCACCGAAACGCTGGACATGTACATCCAACTCTCCTCCTCGGCACCCCTCTCCACCCTCCAAACCTACGAATCGACCCTGCACACCCTCGCAGCCAGCCCAACACAACGCTCCATCCGCTTCCAACCCGCCAAACCTTCTCTCCGGGCCTTCGCGCACTCCCTCGCAGCAGACTGGGGTTTCGCGACAGAAAGCTTCGACCCAGAGCCCCACCGCCACGTCTTCGTACTCAAACCGACCTCGTGGACACCACCTTTTTTCGGCCTCGGTAACGGAAATGCCTTCGGAATTGGCGGCACGAGCGTAGGCGAATGCGTGAAAGTCCGCGAGCGCCAACGGATGAGAGAACGTGAGGCGCAGCGCGTCGCGGTAGCAGAGGCCAAGGCCTCCCGCGAAGCTGCCAAGGCCCAACAGGTCAGTGACTCCGCGGCAGATGGCGGATGGGCGCAAGTAGCTGCGTCACGGAGGAGTAACAATGTCAGTGGCAGTGGAAATGGCACTCGAAGTGGATCGATGACACCTTCTGAACAGAGTACGCCGTTTTCAGGGTCGATGTATGCTGCACTGGCTGCTGGCggtgttggtggtggtgttggtgACACTGCAAGCCCGAAGAAAGAAAAACTCGTCTTGCGTTCTGGTGTTGGTGTGGGGAAGCAATTGAGAAGTCAGCAGTCGGCTCCGGCGCCGGATAGTTgggaggaggaggaagagaAGGAAGAAGCGCAGGAGAAGAACGATGATGTTGGGCAGGATGGAAGTGGGCCAAATTCTGACGAACAGAAggatggaaacgatggcacaACTGAACAGGATGGAACACATGTTGAATCTGGGCTAAAGAATGGTATCGTCGATGGCAGCAATAAGCCTGCTGCTACTGATGTCATTGAAGGTGAACCTGGTGTCACAGATGAAGCCGCGGATGAAACTGGGACTATCTCTCCCATGCCATAA
- Protein Sequence
- MSGPSAAAADNSNHNPRPKPSRRGGGRGRGNNRGSNRHNNQAQTQGQSQSTDARAQVQAPMQQSGEASSANASGDAAPRQRRGPRGGGRGPRPDGRRREQGRGGEPGPAPRRAGISGRMFEGRLTRPEGNTTEGADSLNDPGLRADASVFVPGGKPDGETASTTSTKYHGSKGKSKSKNPPPRPKVTTKSVAPGIATRIHEDILHALYECPICTGELGQRSRIWSCGLCWTVFHLSCVKKWSRNEGSATQNAARRQQEEATGQASAPRAWRCPGCNLPQEIFPSAYTCWCEKEVDPRPLGGLPPHSCGQTCSRPRKGCPHPCDSICHAGPCALCTAMGPTQDCFCGRNSSTKRCQDTDYENGWSCGEICGDLLPCGEHTCSRRCHEGLCGACDVKVEARCYCGSVQTEMLCSARDEGEDSERLRDPSGDVESWTGCFSCGELCNRPFDCGVHFCQKNCHAQDAQPAHCPRSPDVVLDCPCGKTLLTNIPGYSPRTSCEDPILHCLEACGKTLPCGHSCEKICHTGPCGACMRRVSISCRCGRNSMMTICHQGTIEQPQCFRMCKAGLHCSRHSCAERCCTDVEAEHICTRVCGRTLKCGRHTCPEICHKGPCNTCREAIFEEIPCNCGRSILYPPLPCGTQPPSCSFPCERPKLCGHPQTQHNCHTDEESCPKCPFLTEKLCLCGKRTLKNQPCWLADVRCGQICGEPLKCGSHTCQKNCHRVGDCEDDSRPCQQACGKRKTLCGHPCTDPCHAPYPCPEKTPCPAMVTVTCGCGRLRHERRCNAAKAVASKGQIQQPQRFPAVTPLTCDEECARLERNRSLASALGVEINPSTTTTPAAAAANLPYSTETLDMYIQLSSSAPLSTLQTYESTLHTLAASPTQRSIRFQPAKPSLRAFAHSLAADWGFATESFDPEPHRHVFVLKPTSWTPPFFGLGNGNAFGIGGTSVGECVKVRERQRMREREAQRVAVAEAKASREAAKAQQVSDSAADGGWAQVAASRRSNNVSGSGNGTRSGSMTPSEQSTPFSGSMYAALAAGGVGGGVGDTASPKKEKLVLRSGVGVGKQLRSQQSAPAPDSWEEEEEKEEAQEKNDDVGQDGSGPNSDEQKDGNDGTTEQDGTHVESGLKNGIVDGSNKPAATDVIEGEPGVTDEAADETGTISPMP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -