Dpas049649.1
Basic Information
- Insect
- Delias pasithoe
- Gene Symbol
- -
- Assembly
- GCA_010014985.1
- Location
- JAAAKR010001295.1:1-5922[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00088 0.16 14.0 5.4 1 23 93 115 93 115 0.98 2 28 0.0014 0.25 13.3 0.1 2 19 181 198 180 201 0.94 3 28 4.1e-06 0.00074 21.3 0.3 3 23 228 249 226 249 0.96 4 28 0.75 1.4e+02 4.7 0.9 2 23 295 316 294 316 0.96 5 28 1.9e-05 0.0034 19.2 1.4 2 23 384 406 383 406 0.96 6 28 0.0017 0.32 13.0 2.4 2 23 432 454 432 454 0.95 7 28 0.012 2.2 10.4 1.7 1 23 504 527 504 527 0.94 8 28 0.0039 0.71 11.9 0.1 1 23 567 589 567 589 0.97 9 28 0.0017 0.32 13.0 4.9 2 23 601 622 600 622 0.97 10 28 0.014 2.6 10.2 1.1 2 23 634 655 633 655 0.96 11 28 0.0099 1.8 10.6 0.7 1 23 665 687 665 687 0.97 12 28 0.06 11 8.2 3.5 1 23 716 738 716 738 0.94 13 28 0.0018 0.32 13.0 4.3 1 23 749 771 749 771 0.99 14 28 0.0011 0.21 13.6 0.4 1 23 779 801 779 801 0.97 15 28 0.0039 0.71 11.9 0.1 2 23 821 843 820 843 0.97 16 28 0.66 1.2e+02 4.9 0.5 1 23 861 883 861 883 0.91 17 28 8.4 1.5e+03 1.4 2.8 1 23 890 912 890 912 0.73 18 28 0.005 0.9 11.6 3.6 2 23 923 945 922 945 0.95 19 28 0.0016 0.29 13.1 0.2 2 23 967 988 966 988 0.95 20 28 9.7 1.8e+03 1.2 0.3 2 20 992 1010 991 1011 0.80 21 28 4.8 8.7e+02 2.2 3.4 2 23 1031 1053 1030 1053 0.94 22 28 0.0013 0.23 13.5 1.9 1 23 1068 1090 1068 1090 0.97 23 28 0.055 10 8.3 5.1 3 23 1098 1118 1096 1118 0.96 24 28 0.025 4.5 9.4 1.5 2 23 1129 1151 1128 1151 0.95 25 28 0.15 27 6.9 3.9 2 23 1168 1186 1168 1186 0.96 26 28 0.38 70 5.7 0.7 2 23 1257 1278 1256 1278 0.93 27 28 0.00024 0.044 15.7 1.1 2 23 1289 1311 1288 1311 0.96 28 28 0.56 1e+02 5.1 1.6 2 19 1349 1366 1349 1368 0.82
Sequence Information
- Coding Sequence
- TTCTTCAGTCCAACGCCGCCGACGAGCAAACAGAGCAGCGAATCAGCCTTCGGCACGGAGACCTTCACCGTTTCGTCCGTTCAAAGCCTCCACGGCGCCAAGAAACGGCGCCGAGATAGTTTGGAGAACGCCAGCACCAGTTTCGAAAACGAACGCAAGTCTATCGCCGCGAAGAGGGTCAGCGAGCTGCGGAAGCCGACGAAGAAGCCGAAAACGGAGCCGAATACCAAGTACGTGGACGATCTGGGTGCCACCGATTCTGATGAACCGTTGGCGTTTAAGTGCGACATATGCTCGAAGACTTTCAAGTCTCAGCTCAGTATGACCAACCACAGGAAGCATCACAGCCGTAGAGACAGACAGTATGAGTTGCAGAGTTATTTGCATACCAACAGCGCGCACACGGATACCAACGAGGATAGACAACGGAAGAGGAGTGGCAGACGTGGGCCGTCTGACATTGACAGCCAGTCGGAGACGAACGAGAGTAGACACTCGGACGTCGCGCAGGCGAGCGAGCAAATGGACGAGGACAAATCGAAGTGTGACATATGTGGGCAGGTGTTCAAGCTGAAGATAATGCTGAAGCGGCACGCGGAGCTCTGCGGGCAGGTCATCGACAAGGAGCTGAAGGTGACCTTGGCGCCGATTGATTCGAACCGATCTGTCGCGAAGTTGGATTGTGACTTGTGCGAATCGGTGTTCGCGAATAGCAGCAACCTGAATCGGCACATGCGCACGATGCACGCCGGCTCGCTCAACGCCGAGCCGGCGGCCGCCGTGTCTGTTCCGTGTCTCTACTGTCGGACGCCGTTCCACGAGTACTACGCCCACTGGGCGCATTTCAAGGCGTGCCCGGAGCGCGACGACACGCTCGCGCTGGTGTGCACGCTGTGCGACGTGGTGTCGATGAAGAAGACCGGCTACCATCAGCATCTGAAGGTGCATTTTTATCCGGAGGCCGGCGGTGGCGTGACGTCGGAGTTGCTCACGCGCAGGCCGATGTCGAGCCGGGAGTCGTTGGCCAACGATGATGAGATGACGAACGAGGAGCCGGACGATGGGGGCGATGAAGAGTCTCAGAGTACGTTGGACGATTCGGCGTCCGTACACTCCGAGTACAATGCGTGCGTGACCGTTGGGCCGTTGAAGTGCCCCACCTGCGATAGGAGGTTCAAGTACAAAAAGGCACTCGAAAGCCATCAGATGAGCCAGCATTCGGTGGTCGTGAAGGTGGAGTCGCCGCCGGAGGCCGGCGACGCGTCCGAATCGGACAGCAACGACAACGACAACACGTGCGACATTTGCGACAAGCAGTTCTCGTACCACCGTCTGCTGGTGAACCACAAGCGGGCGAAGCACAACGGCAGCGCGGGGTTGAAGCGCGCGCGCATCACGCTGAAGCAGTGTCTCGTGAAGTGCACGATCTGCGATCTCGAGATGCGGGTCGGCGAGGTGAACGACCACAACTCGATGCACATCGCGGCGAATGTGAAGCCGCGGAACCTGTACACGTGCATCGAGTGCTCGGAGCAGTTCAAGAGTTGCAGCGCGCTGGCGAAGCATATCAAGTTCGAGCACAGGTTGCGGACGCGAGGGGGCGGCGGTGTGTCGAATCCGGTGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAGCCGCCGGTTGGGCGGCGTCGCAGCGACGAGGGTGCCGCCGGCTTTGAGTGCGCCACGTGCGGGAAGGTGATGCCGACCGAGCTCTCGCTGAAGCGGCACATCAACTGGCACACGAACGTCGGCAACAACATCGAACGTCGTTTGGAGTGCTCTATCTGCGGGGAGCTGTTCAGATTCCAGTGCCACTACAAACTCCACATGCGCAAGCACTATTACGACACGAACCTCGACCCGAAGCACTTGACGTGCCCGATATGCAACCGCAGGAGCAAGCACTTGCGCGCCGCGCAGGCGCACATGAACTTTCACAAGCAGACCCGGTTCAAGACGAAGGACTACGAGTGCTCCATCTGCAAGAGGGTCTTTCAAAACCGCAAAATCTACCTCTCGCACATGGCGATGCACTTCAAGAAGGGCGACTCGGCTAACAATACGATCATCGGCTCGGCGATCCCGACGACGGCCGACAAAACCGCCTTCGACGGTACGCACACGTGCAGCATATGCGGCAAAGTGTGCGATTCGGAGAACTCGCTGAAGTGCCACATCGCCTGGCACAACTCGAAGAACCTGCTGTACGGCCCCCGGTACGAGTGCGGCCTGTGTCACTTACAATTCACGAACAAGGCCCGTCTGAAGGTCCACCACAGATCGCACTACGAGGACGAGAACGGCCCGTTCAAGTGCCAGATATGCGGGAAGGGTTTCATCGCTGAGGAGTACCAGCGGCGGCATCTCAAGGGCCACAACTTCGATCACCTGTCGCACAAGAGACGCTTGGAGAGTCTGAGGAAGGGTAAGGTGAAGTGTCCGATATGCACGAGGCTGTATCCGGACGTGGTGAAGCTGATACGCCACCTGCGTCGCACGCATCCGCAGAGCAAGATGATCAAGGAGGACCCGGATGCGCCCGCGCAGGTCTGCTACCCGTGTAAGCTGTGCGCGAAGGTGTTCCTCGACGAGCGGCGGCTGCAGCACCACGAGGAGGCGCACCTGCGGAAGCCGGAGATATTCAAGTGCAAGTTTTGCGGGCGCAAGACGCTCTCGCTGAAGACGCACCGGGCGCACATCAAGGGCCACCTCACGCAGAAGTACACCGACGAGCCGTTGCGGTGTTCGCACTGCAGCCAGACCTTCTCGCGCGGATACGACCTCCACTACCACTTGCGCGACGCCCACGCCATTCACGAGACGTGGATCGACGACGGCGCGAAGAACCTCGACGGGCCGCTGAAGGACCTGCAGTGCTCCGTCTGTTTCAAGGTTCTCGCCAGCAAAGGGAATTACGAGCGCCACATTGACTATCACAACTCGCTGCGGTGCAACTACTGCTTCGACTACTTCAGCACGTTGAGGTTCTTGGAGGGTCACCTTGGCTTCAGTTGCGAGAAGAGGAAGCTGATCGGCGACACGGAGGTCTATCCGCGGAAGGTCAAGTGTGATGTATGCTACAAGGCGTTCCATTTGCAGGTGAAATTGGACTGTCACCTGCGGACCCAGCACGGGGTGAGGTCGTTCAAGGAGGCGACGGAGAGCAAGAAGGATTTCGTGTGCGATTATTGCTTTAGGGTGTTTGAGAATGAGCACGCGCTGTCGAATCACAGGCTCTACCATCGGACGGTTGGCCACTACGGTTGCCTGTACTGTAGTAAAAAATTCAACACCCTGACCTCGTACAGGAAACACAAGAACCACCATTTCTGTCAAGTGAACGTCGACAACCCAACGAAATGTGAGCACTGCGAGGAGACATTCGTCGCGTTCAGAGATTTCATCTATCACATGAGGGACAATCATGACGACGACAAAGAGTGGATTGTCTACCCGAAGCAATCGGTTGAAGAGAAATGTGGCATATGTAACAAAATGTTCTATAACCTACATCGGCATATGTCCTACCACGAAGAGAATAAGTGCAAAAAGTGCTGCGAATACTTCTACTCGCGAACGGACTTTGACAATCACATCTGTCACATCGACAGCGATGAGGACGCCGACGCGAAACCGACGGACGTACGTCCGGAATACGAGGAGTGCGCGTTCTGTTTCAAACCGGTCACGGACAAAACGAAGAGGAAACACGACATCCTCCACAGGGGCTCCGGTTCGATATCCTGCCGGTTCTGCACGCTGAAATTCAAGACGGTGGACGCGTTCAATATACACGCGTTCTCCCACAGGAGCCGCAAGTACACGTCGCGACCGATAAAGTGCCGGCAGTGCGGCGAGTGTTTCGTCCGTTACGGGCCGTTTATACGGCACATGAAATCGGCGCACGGGTCGGTCAAGAAGATGCACTACCGCGCGACGGTGAAGCCGGAGACGTGTGTGGTGTGCGGCGGTGAGTTCCCCAACCTGCACAACCACTACAGGGCGCACCTGCTGAACCGGTGCCAGTTGTGCGGAAAGTATTTCACGTCGAGCAAAGTGTTCGGCGAGCACGTGTGCGACGTCGATGATGATCCGACGAAAGTGTTCACCAGTGATGCGGATCTGGCGGCGTTGATCAATGCGTACGTGCCGTTGGATGAGAAAGATGATGAGAAGTATTATGGatatgatgttgatgatgctGTGGATGATGTTGTTTGCAATGGTGATGAGCGGAGTCTGAATTCAGTGGACGCAGCGGAGAGTACGGTACACGAAATGGCATATGCACCGATTATATCGGATGTCTTGTCGCTGTTTGAAAGTGAGAAGAAGCAAATTGATGGTGCAAATGAAAAGGATGATGACGTAGTTGTGGTGATAGATGATGACTCTGGGGACTTTCTAGGTGATGCATCAAACGTTATCAccattgatgatgatgattga
- Protein Sequence
- FFSPTPPTSKQSSESAFGTETFTVSSVQSLHGAKKRRRDSLENASTSFENERKSIAAKRVSELRKPTKKPKTEPNTKYVDDLGATDSDEPLAFKCDICSKTFKSQLSMTNHRKHHSRRDRQYELQSYLHTNSAHTDTNEDRQRKRSGRRGPSDIDSQSETNESRHSDVAQASEQMDEDKSKCDICGQVFKLKIMLKRHAELCGQVIDKELKVTLAPIDSNRSVAKLDCDLCESVFANSSNLNRHMRTMHAGSLNAEPAAAVSVPCLYCRTPFHEYYAHWAHFKACPERDDTLALVCTLCDVVSMKKTGYHQHLKVHFYPEAGGGVTSELLTRRPMSSRESLANDDEMTNEEPDDGGDEESQSTLDDSASVHSEYNACVTVGPLKCPTCDRRFKYKKALESHQMSQHSVVVKVESPPEAGDASESDSNDNDNTCDICDKQFSYHRLLVNHKRAKHNGSAGLKRARITLKQCLVKCTICDLEMRVGEVNDHNSMHIAANVKPRNLYTCIECSEQFKSCSALAKHIKFEHRLRTRGGGGVSNPVDFCEVVVTKAEPPVGRRRSDEGAAGFECATCGKVMPTELSLKRHINWHTNVGNNIERRLECSICGELFRFQCHYKLHMRKHYYDTNLDPKHLTCPICNRRSKHLRAAQAHMNFHKQTRFKTKDYECSICKRVFQNRKIYLSHMAMHFKKGDSANNTIIGSAIPTTADKTAFDGTHTCSICGKVCDSENSLKCHIAWHNSKNLLYGPRYECGLCHLQFTNKARLKVHHRSHYEDENGPFKCQICGKGFIAEEYQRRHLKGHNFDHLSHKRRLESLRKGKVKCPICTRLYPDVVKLIRHLRRTHPQSKMIKEDPDAPAQVCYPCKLCAKVFLDERRLQHHEEAHLRKPEIFKCKFCGRKTLSLKTHRAHIKGHLTQKYTDEPLRCSHCSQTFSRGYDLHYHLRDAHAIHETWIDDGAKNLDGPLKDLQCSVCFKVLASKGNYERHIDYHNSLRCNYCFDYFSTLRFLEGHLGFSCEKRKLIGDTEVYPRKVKCDVCYKAFHLQVKLDCHLRTQHGVRSFKEATESKKDFVCDYCFRVFENEHALSNHRLYHRTVGHYGCLYCSKKFNTLTSYRKHKNHHFCQVNVDNPTKCEHCEETFVAFRDFIYHMRDNHDDDKEWIVYPKQSVEEKCGICNKMFYNLHRHMSYHEENKCKKCCEYFYSRTDFDNHICHIDSDEDADAKPTDVRPEYEECAFCFKPVTDKTKRKHDILHRGSGSISCRFCTLKFKTVDAFNIHAFSHRSRKYTSRPIKCRQCGECFVRYGPFIRHMKSAHGSVKKMHYRATVKPETCVVCGGEFPNLHNHYRAHLLNRCQLCGKYFTSSKVFGEHVCDVDDDPTKVFTSDADLAALINAYVPLDEKDDEKYYGYDVDDAVDDVVCNGDERSLNSVDAAESTVHEMAYAPIISDVLSLFESEKKQIDGANEKDDDVVVVIDDDSGDFLGDASNVITIDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -