Dpas036110.1
Basic Information
- Insect
- Delias pasithoe
- Gene Symbol
- -
- Assembly
- GCA_010014985.1
- Location
- JAAAKR010000077.1:11518100-11526027[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0071 1.3 11.1 0.9 3 23 350 371 349 371 0.94 2 23 0.032 5.8 9.0 0.6 1 22 741 762 741 762 0.95 3 23 1.9 3.4e+02 3.5 0.1 1 23 803 826 803 826 0.86 4 23 0.0032 0.58 12.2 0.4 3 21 837 855 835 856 0.94 5 23 3.8 6.9e+02 2.5 0.1 3 20 865 882 863 886 0.88 6 23 0.012 2.1 10.4 0.2 3 23 906 927 904 927 0.93 7 23 0.003 0.54 12.3 2.6 1 23 933 956 933 956 0.96 8 23 0.091 17 7.6 0.0 1 23 982 1005 982 1005 0.90 9 23 0.014 2.5 10.2 3.4 1 23 1010 1032 1010 1032 0.97 10 23 0.0022 0.4 12.7 0.2 1 23 1038 1061 1038 1061 0.95 11 23 0.0001 0.019 16.9 1.6 1 23 1074 1096 1074 1096 0.97 12 23 0.00013 0.023 16.6 1.8 1 23 1142 1165 1142 1165 0.97 13 23 0.0028 0.51 12.4 1.8 1 23 1225 1248 1225 1248 0.96 14 23 0.0013 0.23 13.5 1.4 2 23 1268 1290 1267 1290 0.95 15 23 0.081 15 7.8 0.2 2 23 1296 1317 1295 1317 0.94 16 23 0.0072 1.3 11.1 0.2 1 21 1361 1381 1361 1382 0.95 17 23 0.0022 0.4 12.7 0.3 1 23 1392 1414 1392 1414 0.93 18 23 0.00015 0.028 16.3 0.4 2 23 1507 1529 1507 1529 0.93 19 23 2.4e-07 4.4e-05 25.2 1.4 3 23 1536 1556 1535 1556 0.98 20 23 0.0099 1.8 10.6 0.1 3 23 1576 1597 1575 1597 0.96 21 23 0.016 2.8 10.0 0.0 1 23 1620 1642 1620 1642 0.98 22 23 0.016 2.9 10.0 0.3 1 23 1648 1671 1648 1671 0.93 23 23 0.00024 0.043 15.7 0.7 1 23 1679 1702 1679 1702 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAAGTGAATTACTACCAATATTTCCTACCACCAGTTCCGATGACTCTGAACCTTCTGTCCTTGCATCGATAATTAAAGACTGCGTGGCCGTTCAGataacCGAAAATGACGAGCTGCCAACAAATGTCTGCAGAAAGTGCATGGATAATGTCAATAACTGGCACACATTCAAGACAGTTTGTGAAAGGacacaaaacaaattacaatcTCTCATTAATAAAGAGAGCAGCCATCTAGAAGAGATTCATATTAAAACTGAACCAACTGAAGGATTATCAGATGGGGGCTATGATGATGGTGTCATTATTAATGGATCATATCCTGAAGAAGAAAATGCTGGGCCCTCAAGCAAGATTCAACCAGAAGGTCCACCGATATTGACATCACTGGGACTTACTCCTAGAAGTGATaagAAAAATATAGATCCCCGAATGGACTGGCAACGAGTCCAtgcaatattgaatattatacgGGAAGATGAAATGATAGATTCTCTCCAGTCCAATGAAGAGTATGAGGTCTCTCACATATCTGACCATGATTCGGAAGTAGAATCAGAATTAAAAGCAGATGTCCCCATTGATTGCCGTGACTGTAGAACtggatatatatgtaaaaacaaaactgtTCTTTCCAAAAAACCCAAGTTGAAAGTAACTGAAAATATACCAAAAGTGAAAGAGGCATTACTGTTGCGACAACAGAATATACCAATAGTCAAAGCCTGTCATAAACCCCAGAATGCATGGCAAATGCTTATTAGTGATGATATGCTTGAACTAATTGTTACATccacaaatgaaaatattgcaaaaactCAGAGCTGTGCAACTTCAgGCGTTGAGAGTGATAAAGATGAGGAGGAAATGGAAGAAGATTTAAATGAGGAAGTCGGTTTTGATAATTCTCCCGCTGTACCTGAAGTTTCTATCACAGTAATGCGCCCCACGGGCGAAACGCTACATTCGCGACAGGGCATCCAACAACTCGCCTCCAAAGACTGCCTCGTGTGCGGCCGTTCTTATCGATATTCCCACAATGCACGCCGCCATGAGCTCTCAGCTCATAGTTTTGATAGATATACcaacaaaataacaatcaaGAAATCCCATAATCGTATGCAAGGGAAACTACGACCCAATCCGTTCAACCCAAAAGCTCGCTTAATGCCAAATCCGATTAGTCATAAAATGAAACTGAAACTACCAAACCAAAAAATGAAACTTATGGCTCAAAAACATATACCACCGAAACCAATTCTAATTCGCACGCTGAAGCCGACACAAAATAATTTGCCGTATCCCTTACGTATCAAAGCATTGAAAGacttgcaaataaaaaagaaggaaCCGCAAATATTAAAGACATTGCTCACCGCCAAGCCGGAGTTGTTGATCTCGGAGCCCGAAATAATGAACTCGGGCCCCGAAAGTCCCGAAACATTGATATCGGAGCCTGAGATTGCATCTTTCCAAGTAGAGACTATTTTATCTGAACCAGATGGCTATATACATCACCAGGATGATGTTGAGAAAGATGATGACGGCCAAAATCATAACCAACATTATGACACCGTCGAAATGGACTCAGAAAATGAGATTGAAATTGCTCGCCAGCGCGAGTGTGACGGAGACAATGAAGCGCAACCTGAAAATGACACAGCGGAAAATTACGACGAGGCAAACGCAGATGGGCAAGACAATGCTGTAGAAAAAGAGCAAAACGAATGTATGGACGAAATGCAAGAGAAAGTGTCTTCAGAACGAGATGATTTGGATGAAGACGCGAAGGAATATGAAGTCGCTGTCAAAGACAATGATGAAGGTCAAGAGAGTTATGAATATGACCACGACGGTCATCCTCTTGGGATCGTTCCGGttgttgaaataaatgaagGTATGCACATCTATAAAAGCGAAGCTAACGAGAACGACGACGAAGATCTAGAGTTGGATTACACTGCGGATCCGAATGACACAGTGGACGGTGATGATATTAAAGAGCTCGACCCAGACAAACAGTATGTCACTAAAACCCAAAGAGACTTCATTCTCAAGTATCGAGACATAATTGAACAGATAAACACTCAAAGGTGTCTCTGCTGTGATAGAGAACATCCCCGTAGAAAAGCAGTCATACAGCACTTGCAGAAGAATGGGCACAAAGTACCAAAACACACTTGTTACAATTGTGTGGTGACCTTTTCTCATATCGGTGCGCTGCTGAGTCATATGAGATCAAACTCGTGTACTGATCTGTGGAGGATCATTTACAAGGAAGATGGAATTACCGACGACCAAGTTTTGGATGATGAGCCGAAGGTAAAAGTCCAATACAAAGATATCTTCAATGCAAGGTCGTATGCATGTAAGCTGTGTCCTGCCAAAttccaattaaaacaattgataaTGAAACACGTGTTGGATGTTCACGAGGACGGACAATCGCATGTCGTCCTTGCTTGTGTGCATTGCGGTTCACGGTTCAAAGACAAAGCGCTTTGGAAAAAACATATCCGCAACGGAGAGTGTACCGTATATATCGCTTGTGATTTGTGTAGTGAAAAGTTTGGTAATGTACAGGATTTCAATGAGCACGCGGTCGCAAGTCACGCGGGCAGCTTTGATCCCGACAACCAGAGCAAATGCATCGACGGCCGGCCGACGGATTGCCCTATCTGTGGTAAGAAGGCGTTCACCTATCAAACTTTAGTGAAGCACTTGAAGGCAATCCATAATGAGGAGACCCCGCACTACTGCCGGCACTGTGACGCTAAGTTCGAACAATCCGCCGATCTCGACAAGCACATTTATACAGAGCATTCGCATCAGATGCTGGAAGGGCAGTCATCGGAGCTGGACATGTCCCTGGTGAAGGAGGAGACAGAGGAGTACCATTACTCATGTACTGAATGCAATGCCATATTTGAGACTGTGGACGCGTGGACAGATCACCAAGTAGCGGAACACAACCAGATCGCCCATCACTGCGATCAGTGCGAGAAGAAATTCTTGCGGCCCTCTGAACTGGCGGAGCACAAGAATACCCATTTGCGTGTGAAATTCTATCCGTGCAGTCTGTGTGGAAACTCTTACAGCAGCCCGCAGATGCTGTCTCAACACGTGCAACAGAATCATCCCGGCTCGAGCACTATAGGCATTGGGGATGCCGAGTTCTTCTGTGATATATGCGTGCGAACGTTTAAGAGCCGTCAAGCGTTCTCGAACCATATGCGTATTCATGCTAAAGTTCCGGCCGGTAAAAAAAGGTCAGATAAGAGTTTCGCCCCGCAGATTATTGGTAAACCAATTCAACACTTCTCGATGGTTCAGGGCTTCGGGCCATTCAAACCGAATTGCAACGTACCTAACGCACCGTATTCCTGTGATATATGTGGTAAAGGTTTTATGCACAAGAAGAACATTTGGAAGCATAAGAAAGTCCTACATGCTGACCTTTTGAACGAGAGACCCGACAGCGAAGAGAACACCATGCACGCGTCTACTGAAGAGGATGACTACAATCCCGATGAGAATGGGGCTATTTTATCAACCCCTCAATTCAACAGCTTCAATTTCACGAGCATGGTTAATACCATGCAACCGACGCCTCAGGAGCCGATACAGTTCTCGTGTGAGCTGTGTTACAAGCGTTTTCCACTTAAGACAAGTCTGTGGAAACACAAACGCGCCAAACACGGCATTATTAACCCTTCTGCCGCCGAGAACAACGTTGAGTCGAATAACAGCCGGTCCAGTTGTACCATTTGCAAGATATCCTTCGCCGACAAGAAGTCCTATTATCGACACAGAAAGAATGTTCACAAATCCACAGTCCAAATGTGTAAAATATGTGGGAAGCCGTTGAATTCTTTGGAGCTCTACGATCATTTGAGGTCTGAGCATTCCCGGGAATTATTAGCGTATTACCCCGCGCAGGGCTCCAGCAAAACGCAGGAGATGTCACAGGAAGTGGaagttgaatttgaaatagaaaGGGATACGCTCGATCCGAATGCTGAATATCAAGCACGCTACCCGTGTGACACGTGCGGGAAACAGTTCGTGGGCCTGCTGGCTTTGCAGAATCATCAGTGTATCAATCAAATGCCACAGCAACCGCAAACGTTCGACTGTGAGATTTGCCACAAGAGCTACGTGTCCATAGCCGCGTTGAAGAGCCACCGCGGCTGGCACTTGCGCTCGCCGGACGGCAAGGCGGCCGCGAACAACACCGGCCTCTGGATGCCGCAGAACAAAGTGACCAGCAAAGTCAGCAAGTACGAAGTGGTAGACGCGTCGCAATTAGCTCGCGTGACCCACACCACTACGTCCGCGTCGTCTGCGGTCACGAAGCGCCGGCTGCCGCCGGAAGTCGAAGTGACGGTTGTCAATCCAAATAAGAAATTGCGCTCCGACGATTCCATAGAGATGGACCAGCAGGCGGACATGTCCACGCATTCCGACGATAGATATTGCAAAATTTGCGATCGAGAGTTTACCAAACGCGCCGCCTACCAGCGGCACATGGACGAAGTGCATCAGCCGAACTCTGTGTTCTGTCCGGTCTGCGATAAAAGTTTCACGCGTAAGAGTACTCTCCTTGTGCACATGAAGAAGCACTATGACGCTGGGGAAGGCAGCTCGGTTACTAACGTTCACGACGAAGACGCCCCGGCGTGCGATGTGTGTGGCGAACAGTTTGAGGACCTCAACGCTTTGACGATTCACAAGGATACCCAGCACGGTGACGAAGATTCGGGCGGCGAATCGGAGGAGGACGGCTCCGCCCCGCTGCCGCAGCCGGGTGAGTTCACTTGCAGCCAGTGTGGGGACGGGGTGGCCACGCCCCGTGATCTGATCGCGCATCGCAATATGCACTCTACACCGACCAAGTTCTTGTGTAACATCTGCAAGGTGTACTTCGCGCGGGCTATCGATTTGTCGTCGCACACTCGCGCGCGCCACTCGGACAACGACAAGGTGTTCTTCCCATGTGCCATGTGCGATCGATTCTACATGAACAAGAAGAGCTTGCAAAGGCACATTGAAATGACCCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRSELLPIFPTTSSDDSEPSVLASIIKDCVAVQITENDELPTNVCRKCMDNVNNWHTFKTVCERTQNKLQSLINKESSHLEEIHIKTEPTEGLSDGGYDDGVIINGSYPEEENAGPSSKIQPEGPPILTSLGLTPRSDKKNIDPRMDWQRVHAILNIIREDEMIDSLQSNEEYEVSHISDHDSEVESELKADVPIDCRDCRTGYICKNKTVLSKKPKLKVTENIPKVKEALLLRQQNIPIVKACHKPQNAWQMLISDDMLELIVTSTNENIAKTQSCATSGVESDKDEEEMEEDLNEEVGFDNSPAVPEVSITVMRPTGETLHSRQGIQQLASKDCLVCGRSYRYSHNARRHELSAHSFDRYTNKITIKKSHNRMQGKLRPNPFNPKARLMPNPISHKMKLKLPNQKMKLMAQKHIPPKPILIRTLKPTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPELLISEPEIMNSGPESPETLISEPEIASFQVETILSEPDGYIHHQDDVEKDDDGQNHNQHYDTVEMDSENEIEIARQRECDGDNEAQPENDTAENYDEANADGQDNAVEKEQNECMDEMQEKVSSERDDLDEDAKEYEVAVKDNDEGQESYEYDHDGHPLGIVPVVEINEGMHIYKSEANENDDEDLELDYTADPNDTVDGDDIKELDPDKQYVTKTQRDFILKYRDIIEQINTQRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRSNSCTDLWRIIYKEDGITDDQVLDDEPKVKVQYKDIFNARSYACKLCPAKFQLKQLIMKHVLDVHEDGQSHVVLACVHCGSRFKDKALWKKHIRNGECTVYIACDLCSEKFGNVQDFNEHAVASHAGSFDPDNQSKCIDGRPTDCPICGKKAFTYQTLVKHLKAIHNEETPHYCRHCDAKFEQSADLDKHIYTEHSHQMLEGQSSELDMSLVKEETEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSLCGNSYSSPQMLSQHVQQNHPGSSTIGIGDAEFFCDICVRTFKSRQAFSNHMRIHAKVPAGKKRSDKSFAPQIIGKPIQHFSMVQGFGPFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNERPDSEENTMHASTEEDDYNPDENGAILSTPQFNSFNFTSMVNTMQPTPQEPIQFSCELCYKRFPLKTSLWKHKRAKHGIINPSAAENNVESNNSRSSCTICKISFADKKSYYRHRKNVHKSTVQMCKICGKPLNSLELYDHLRSEHSRELLAYYPAQGSSKTQEMSQEVEVEFEIERDTLDPNAEYQARYPCDTCGKQFVGLLALQNHQCINQMPQQPQTFDCEICHKSYVSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTSKVSKYEVVDASQLARVTHTTTSASSAVTKRRLPPEVEVTVVNPNKKLRSDDSIEMDQQADMSTHSDDRYCKICDREFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYDAGEGSSVTNVHDEDAPACDVCGEQFEDLNALTIHKDTQHGDEDSGGESEEDGSAPLPQPGEFTCSQCGDGVATPRDLIAHRNMHSTPTKFLCNICKVYFARAIDLSSHTRARHSDNDKVFFPCAMCDRFYMNKKSLQRHIEMTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -