Basic Information

Gene Symbol
atnD
Assembly
GCA_010014985.1
Location
JAAAKR010000767.1:66362861-66365916[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.1e-07 0.00089 20.8 0.8 20 45 372 399 369 400 0.88
2 3 2.9e-10 3.7e-07 31.7 3.3 1 46 405 470 405 470 0.91
3 3 1.6e-08 2e-05 26.1 0.1 3 27 477 501 475 507 0.91

Sequence Information

Coding Sequence
ATGGTGATGCTCCGATTGACGGCCGAGCAGTACCGGAAGCTGCCGATTCTGGTAGACGAGAAGACGTGCATCGGCAAGACCTATATCATCACGGGCGGCAACTCTGGCCTGGGCCTCGAGACGGCGCGACACCTTGTCGCAGCGTCGGCCGAATGCGTCGTGCTGGCCGTGCGGAACCTCAAGGCGGGAGAAGTTGCCAAGAATGACATTGAGAAGACGACCGGCCGCAGGGGAGTTGTCCAGGTACGGCATATAGACATGTCAACCTATGCGTCTGTCCAGAGCTTCGTAAAGCAGATAACGGAAGAGCTCGACAGGATCGACGGCTTCATCTGCAACGCGGGGCTCATGATCGATGCGTGGTCGCAGTCCGAGGGTATGGAGACGAGCATGTTTGTTAACGTCATCAACACCGTGTTCCTCGGCGCTCTCATGATGCCTAAACTCAAAGAGTGTGCCAGCAAGTTCAACATCAAGCCCACTCTCGTCTTCATCGTCAGTGTCCTTGGATACACCGTCAAGGATGAGATGGACAAGAGCCGCAACGGCGTCATCTTTGACGGGCTCAACGACCAGAAGCGGGCCAACATGGACTCGAGATACGCCCTCACCAAGCTCGTGGAAGAGTGCGCCGTACGCCAGTTCGCGGCCCTCTGCCCCGTCGAGCGCACAGGCGTCATCATCACCATGGTCGCGCCTGGTCTCTGCACCACCGGCCTAGGCCGCGATGCCCGGACCTTCACCAAGATCATGCACGAGGCGGTCCGGGCCATGATGGCGCGAACCGCAGAGGTGGGCAGCCGCACCTTCCTACACGGGCTGCTGGTGGGCGAGGAGGGCCACGGCAAGCTGCTGTCCGGCTGCAAGATCAAGGAGTTCTGGGTGCCCGCGTGGCTCACCAACGAGGAGGGCCAGAAGCTGCAGAAGGGCATCTGGGACGAGCTCGTTTCCAGGCTGGAGTCTGTGCAGCCCGGCTGCATCTCACAGCTCAGGGTCAGGTCCGCGTCGTATTCTCTTGCTGGTGGAGGTCCAGATACGGATGGGGCTCTCACCCGGTCCGCGTGCAGGCCAGGTTATAATCAAGCTCTCACCCGCGGGCCGgCATGCAAAAACGGCAGCGTACAGAACTGGAACGACATTGCCTCGTCATTGCTTGGGCGCACCAACAAGGACTGCCGCAAGCGATGGTTAAAAGTACAGGTCGACATTCAAAAGGGGGCATGGAAACGGGAAGAAGATGAGAGATTGCAGCACGCAGTGCAGCAGCTAGGGTTCAAGTATGTCATTTCCCGTCCGTGTCATGTTGGATCGACTGTTGATGCTGACTGCCAACGCAGATGGTCTCGCGTGGCCACCATGGTGCAGGGTCGCAATGCAGACCAGTGCGCAAAACGCTGGCAACAAGTGCTGAGACCCGACTTGAAACACACGTGGACCCCTGAAGAGGATGAGAGACTGTTGGCAGCCATAAAAAAGTACGTCAACAACTGGAAGCAGATTAGCCTCACCGAGTTCCCCGGATCGTTCCACCCACGATATACGGAATCGGTGAGTAGGGTCCTTCATCTGCACAGAGCACGAGTTGACTCCCTCCAAAGGAGCTGCCTTCTTGGTCGTAGGTGCCAGAATACTAGTGCCAAGGGACCTATATCTGCGCAACTACAGACCCCGAGTTCAAATGAAGACGAAATGGTGTTATGCAGAGACAAGAATGCCGATGACGACACCCGCGATGGTAGCTCCGAGTGCGAATACACTGACGGCCGAGACATCCTGGTTGACCCGGATCTCGGAGTTGGGTCCCCTAGTGTCGCCGGCTTTCAACAAACTCATGGGATTCTCATGACACCAGATAGCGCTGGTACTATGTTTGACCAGAACTGGGTTGGATCCACAGAAAACATGCAGAATCACCAGGAGCTACCTGTACCAGATAATGACTGGCTTTCCTGGTACAGTCCGTTCGAGGGGTCATCCTCGACCGCGTCTGGTTCCCAGTTTCCGTGGTGGGAAAACGGTCCTGTGGATCAGCACTGCTTTCCCAGCTCGGTGTCATCTGATGCTGGAATCTTTGAAGTGGCCGGGAGAGTTGGAGACATAAATGGTATGGGCGGACTAGAGAGTAATATCCATGCGAGTATAGGAATGCATAGTGGCGATACCGTTTTGGAGAACGAGCAGAAGGGGAGCGCCACCCTGACCTTGGATCAAGTGGACCCCAATGTGGCCCACGAGATCATGGGCAGCATGCTCAAGCACAGCGCAGGTCTCAAGATTCGGTGCGTCGTCAACGGCAAATGA
Protein Sequence
MVMLRLTAEQYRKLPILVDEKTCIGKTYIITGGNSGLGLETARHLVAASAECVVLAVRNLKAGEVAKNDIEKTTGRRGVVQVRHIDMSTYASVQSFVKQITEELDRIDGFICNAGLMIDAWSQSEGMETSMFVNVINTVFLGALMMPKLKECASKFNIKPTLVFIVSVLGYTVKDEMDKSRNGVIFDGLNDQKRANMDSRYALTKLVEECAVRQFAALCPVERTGVIITMVAPGLCTTGLGRDARTFTKIMHEAVRAMMARTAEVGSRTFLHGLLVGEEGHGKLLSGCKIKEFWVPAWLTNEEGQKLQKGIWDELVSRLESVQPGCISQLRVRSASYSLAGGGPDTDGALTRSACRPGYNQALTRGPACKNGSVQNWNDIASSLLGRTNKDCRKRWLKVQVDIQKGAWKREEDERLQHAVQQLGFKYVISRPCHVGSTVDADCQRRWSRVATMVQGRNADQCAKRWQQVLRPDLKHTWTPEEDERLLAAIKKYVNNWKQISLTEFPGSFHPRYTESVSRVLHLHRARVDSLQRSCLLGRRCQNTSAKGPISAQLQTPSSNEDEMVLCRDKNADDDTRDGSSECEYTDGRDILVDPDLGVGSPSVAGFQQTHGILMTPDSAGTMFDQNWVGSTENMQNHQELPVPDNDWLSWYSPFEGSSSTASGSQFPWWENGPVDQHCFPSSVSSDAGIFEVAGRVGDINGMGGLESNIHASIGMHSGDTVLENEQKGSATLTLDQVDPNVAHEIMGSMLKHSAGLKIRCVVNGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-