Basic Information

Gene Symbol
-
Assembly
GCA_010014985.1
Location
JAAAKR010000508.1:27788-29770[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.24 3e+02 3.1 0.8 34 44 88 98 88 100 0.85
2 3 2.1e-13 2.6e-10 41.7 0.3 1 44 106 149 106 151 0.96
3 3 5.2e-12 6.5e-09 37.3 0.0 3 42 159 199 158 201 0.92

Sequence Information

Coding Sequence
ATGGAGAATTCTAGCTGGAACCTCGACAGTTTTGGCTTAAATGGGTACTTGTCGTGGGACCCAACTTTTTCAATTGAAGGCAAGGATACAAGAGTTGAGAACTTCATGGGTAACCTGGGAGGGCTTTTGGGGAGGCTCTTGGAGCATGGCGGTAAGTACATCTTGACTCGTAAACCAGATGTCGACATATTTAATGTCATCGAGAGCCGGCTAGGCGAGACTTGTTCTTGCGGCCAAACAGCAGGCGGAACTACGCCATGGACCAACAAAGACTGCAGGCGACGGTGGTGCAATTCTCTGGATAACAGCGTGTCCAAAGGCCGTTGGTCCAGCATTGAAGATGAACGGCTATGCCATGGTGTGCAGCAACACGGCACCAACTGGGCTAGGGTTGCTTCTATCGTACGCACCAGAAACGCGGATCAGTGTGCGGCGCACTGGAGCCAGACTCTGAATCCAGCTATTGACTATAGCGACTGGAGTGATTCTGAGGACTCTAAACTGCTCCATGCCGTCCAAGAGCATGGAACCGTTTGGTCGACCATTGCATCCAAGTACTTCCCAAACAGAACGCCTTTAGGGTTGAAGAACCGCTACTCGGCCCTGTGCAGAGGCCCCAGGAGTTCAGGGCAATCTGTTCTCGTTTCTGGTGATGGATCCAGCACATGGGACTCGTCCTCCAATGAGGATGATGAGGCAGATGGAAGAAGATCAGAAACAGGCAACCTTCTTCATTCCGACTTACGAGAGAACCAATTTTCAAGTAACACAGGCTTCACCACCACAATGCAGGGCTGCTCGCAAGGGGGATTGCAGTCTCCTGCTCGGTCTTACGTGGAATCGGCGCCTCCGTTTGCACCGTTCGAGGCGTTGCTGAATTGTACACCGCCTATCACAATGAACCCATCTGATATCTTTTTCATGCACAATAGACCCGAGAATGCGAATCACTGGGGTCAGCACTTTCTGACACCGTCATCACTCGAATTTGGTACTCCAgAGCTTTCGCAGATGCAAAATCCCGGAGTCCAAATTGCCACGCCAACAAGCAGTGAAATATCACACGACACAGAGCAGGAAACTTCGATATCAGATCAAACACAGCAACAAGTGTCGATAGATCTGGTTTGCAAGAAGGATCAGCTGGGTCATATTATGGCCATTCTGGTTGATCTAACTACGTCAATGGTAGTCAGGCCGGGCAACAGATCGTAG
Protein Sequence
MENSSWNLDSFGLNGYLSWDPTFSIEGKDTRVENFMGNLGGLLGRLLEHGGKYILTRKPDVDIFNVIESRLGETCSCGQTAGGTTPWTNKDCRRRWCNSLDNSVSKGRWSSIEDERLCHGVQQHGTNWARVASIVRTRNADQCAAHWSQTLNPAIDYSDWSDSEDSKLLHAVQEHGTVWSTIASKYFPNRTPLGLKNRYSALCRGPRSSGQSVLVSGDGSSTWDSSSNEDDEADGRRSETGNLLHSDLRENQFSSNTGFTTTMQGCSQGGLQSPARSYVESAPPFAPFEALLNCTPPITMNPSDIFFMHNRPENANHWGQHFLTPSSLEFGTPELSQMQNPGVQIATPTSSEISHDTEQETSISDQTQQQVSIDLVCKKDQLGHIMAILVDLTTSMVVRPGNRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-