Basic Information

Gene Symbol
Tcp11l1
Assembly
GCA_010014985.1
Location
JAAAKR010000767.1:62307515-62312147[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.2e-13 4e-10 41.1 0.9 2 46 383 432 382 432 0.93
2 3 8.9e-05 0.11 14.1 1.8 1 24 438 462 438 463 0.94
3 3 3e-11 3.8e-08 34.8 0.1 1 42 471 513 471 516 0.96

Sequence Information

Coding Sequence
ATGGGTGATCGTGACAAAGGAAATTCTAGCTCCCAAGACGAAAACTCGGagcaaaatataagaattccTCCTAGGATAAATCCAACTGGTCCAAGCTACTTTGCCAGTGAGCCTCTTCAGTTTAGAGTTAGAGGTACAACAATAACTGATGCATCTCCACCCCACTTTGTAACATTGGAGGATATAATGAAAGCAGCTCATGGCATGAGGAACATGGCTTTAGCTCATGAGATAGCTGTTGACCAGGATTTTAAGCTAGAGCCATTTGAACCCCCTGataatagCTACCAGAAGTTAGTTAAGGAAACAATGCATCGAGCATATTTTGATATACTGAGAGAACAACTAAACTCTGATCCACCAGAGTATAAGCAAGCTTTAGTTTTATTGGAAGATGTAAAACAGggattattttcaatactcCTACCACGTCATACAAGAATCAAGGAAATGATAGAAGAAGTCCTTGACAAAGACTTCATAAGGCAACAAGCAGAGAACAATAGCTTGGACTTCCAGAAGTATGCCAGTTTTGTGATAGACCTCATGGCAAAACTAGCTGCACCAGCTAGAGATGAAATGattcaaaaaataactcaGCTAAATGATACTGTAAAAATATTCCAGGCTATCCTGGAAACATTGGAAGTACTGAAGTTGGATCTGGCTAATACACTAATAGCCATGATAAGGCCTCATGTGCAGAAAGAAAGTGTTCAGTATGAGAGAAACAAATTTGAAGAAGTCCTTAAAGTTTCTGAtgatggGCTACAACATACTCGTGAATGGCTGCGATGTCATATTGATAGGACAGGCTTGAGTATTCCGGTCACCGACCccaatataataagaaatgtcACAGCTCAAACATTAGCCAAAGCTTATTTGGAGCTACTTGAATGGGATAATTCTAAAGGTTATCCAGAGTCCGCCGTAGACGGCTCGCTCTCGGGACCCGCTTCCCGTTTCCTAGGGCGTTGGCTCAGTTATACTTCAGATTGGCAAAGCTCTGCTGAGCCTCAGAATAAAAGGCGGGACCTGCGTACAATAGCCTCGAGTTCGTTGGCATTAGGCAGCTCAGTCCCGTCTCAGCCAAGAATGATGACAAGTATCACGAAACTTAAACCCAAGATGCCGCGTTCACCTCGACGCTGGACGGAGGAGGAGGATGAACTCCTTCGGAAAGAAGTCATGACCCGTGTGAATCAAGGCGAGGTTAGCGATTGGAGTGCCATTGCGACCAATATCCGGGGCCGCACCAACAAAGATTGCAGAAAGCGATGGCATAATGTCCTTTCAGGCGGTTTGAACAAAGGCCACTGGACCCTGGGTGAAGACCTGCTGTTGAGCCAAGCAGTGCATGAGTACGGTGAATGGCGATGGAAACAATGCCTCAACCCCCAGCTGGATAAGGGCGACTGGTCCGAAGAGGagAATCGGATCCTCCTAGAAGCATACGCGCAAAAAGGCAGTCAATGGCAACAGATTCAAATGGAGTATTTCCCAGCTCGGTCCAGAAATGCTGTCAAGAACCAGTACACTGTCCTGACCCGAAGAATTAATAAAGCCGGAGCACCTGCTGAGCCTGGAGAAATGGATATAGTAACTGAAAATTCTAAGGGGGACAGTTACCAGGCTGAGGCATCTGAAGACTTCACCATGGCAGACTCGGACCCTCCTCCATCCAATGGGATTGCCAGTAATGGTGACAACCACGGATTCCTAACCGgcaatagaaattttaagcCCCGCGAGCCCCATGACATTCTGGAGTATGGCCAACAACCTCTGGATAATGCGTTGTTTGGCGATGAGTTTAATTCCAGTGAGAGACTTGAGTTGGCAGGACTTAATGACGGGCCCAATGCTTTTGAACTGTTGTCCCTTGGGGAGCCTTCCATGGGACATACAGACCTTCAGGTTCCGTTGTCCTCCCCTTATGCATATACTGACTTTCCTTGGGACGACACGTTTTCCTCTCAACCAGGCCTGTCGTCGAATATCGATCCTCGTGACGGAAGGCTGGCCTTGAGTGACCATGAGGGCCGGTCAACGGAAAGAATCACTCTGTCGGTCAATAAACCTAACGATAATACGGTTAATTTGCTGTTGCAAATAGCGGAATCTAATAATTCGGAGATTCGCTTTGAGAAGGATGTGTTGAACTAG
Protein Sequence
MGDRDKGNSSSQDENSEQNIRIPPRINPTGPSYFASEPLQFRVRGTTITDASPPHFVTLEDIMKAAHGMRNMALAHEIAVDQDFKLEPFEPPDNSYQKLVKETMHRAYFDILREQLNSDPPEYKQALVLLEDVKQGLFSILLPRHTRIKEMIEEVLDKDFIRQQAENNSLDFQKYASFVIDLMAKLAAPARDEMIQKITQLNDTVKIFQAILETLEVLKLDLANTLIAMIRPHVQKESVQYERNKFEEVLKVSDDGLQHTREWLRCHIDRTGLSIPVTDPNIIRNVTAQTLAKAYLELLEWDNSKGYPESAVDGSLSGPASRFLGRWLSYTSDWQSSAEPQNKRRDLRTIASSSLALGSSVPSQPRMMTSITKLKPKMPRSPRRWTEEEDELLRKEVMTRVNQGEVSDWSAIATNIRGRTNKDCRKRWHNVLSGGLNKGHWTLGEDLLLSQAVHEYGEWRWKQCLNPQLDKGDWSEEENRILLEAYAQKGSQWQQIQMEYFPARSRNAVKNQYTVLTRRINKAGAPAEPGEMDIVTENSKGDSYQAEASEDFTMADSDPPPSNGIASNGDNHGFLTGNRNFKPREPHDILEYGQQPLDNALFGDEFNSSERLELAGLNDGPNAFELLSLGEPSMGHTDLQVPLSSPYAYTDFPWDDTFSSQPGLSSNIDPRDGRLALSDHEGRSTERITLSVNKPNDNTVNLLLQIAESNNSEIRFEKDVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-