Basic Information

Gene Symbol
cef1
Assembly
GCA_010014985.1
Location
JAAAKR010000346.1:2849-5419[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-15 3.8e-12 47.6 0.4 2 46 7 52 6 52 0.97
2 2 3.2e-13 4e-10 41.1 0.1 1 46 58 102 58 102 0.96

Sequence Information

Coding Sequence
ATGCCCGTCGTTAAAGGAGGCGTCTGGACGAACATCGAGGATGAAGTGCTACGCGCAGCGGTTTCAAAGTACGGTCTGAATCAATGGGCACGAGTATCATCGCTCTTAGCACGGAAGACACCGAAGCAATGCAAGGCGCGATGGGTTGAATGGCTGGACCCCGGTATCCGCAAGGTCGAATGGTCGAGAGAGGAGGATGAAAAACTGTTACATTTGGCGAAGTTGATGCCGACCCAATGGCGCACCATTGCGCCAATCGTCGGGCGCACAGCGACACAGTGCTTGGAGCGTTATCAGAAACTTTTGGACGAAGCCGAGTCCCGGGAAAACGATGAGCTGGGTCTTGGTGGTCCGTCTGGTGGAGAGGCGGCTGCTCCGAGCGCAGACGATGTTAGGCGGTTGAGGTATGCTTTTGCTCAACTTCTCTTGAACCCTTGTATTCGTACTGACGCGCATAGGCCTGGTGAACTGGATCCTGACCCAGAGTCGAAACCCGCTCGCCCCGACACGATTGACCTAGATGAAGACGAAAAGGAAATGTTGAGTGAGGCTCGTGCTCGTTTGGCAAACACCCAAGGAAAGAAGGCAAAGCGCAAGGCGAGAGAACGACAGCTCGAGGAATCTCGTAGACTTGCGGTGCTTCAAAAACGCCGtgaacttaaaaatgccggtaTCAACATCAAGGTCGTCACCCGCAAGAAGGGTGAAATGGACTACAATGCGGATATTCCCTTCGAAAAACCGGCAGCTCCTGGATTCTACGACACCACTGAAGAAGAGGCCAAAAATGAACGCCAGAGAGAAATGTTTGATCCTCGGAAACAACAGTTGGCCAACAAACGGAAAGGAGATCAAGACGACGACGCAGAGCGGAAGAAGAGGAAAAACGACAAGAACAACAATGCTGGCGCCTCTGCCGCCGCCGCACGAGCTGGTCAAATGCAGAAAATCCGCGAAGCAGAACAGAGCAGCAAGAGGCGGCCTCTCGTTTTGCCAGCTCCGCAAGTCGGTGAAGGGGAGATGGAAGATATCATCAAAATGGGAATGGCAGGTGACAAGGCCTCCAAGATGTCTGGTGACGAAGAGACCACCCGAGGTCTAATCGGAAACTATACCAGTGTCGTTGGCCAAACTCCGATCAGAACACCAAGAGCTCCTCCGGAGGAAGATCACATTGCCAATGAGATTCGGAATATCAGGGCCTTGAATGAAACACAATCATCACTGCTTGGTGGAGAAAACAATCCTCTTCATGAGGGTGGCTCTTCTACTGGGTTTGAAGGAATAGCTCCTAGACGGCAGCAAATCGTTACCCCCAACCCCATGGCGACTCCTTTTCGACAGGCAAATGGTGTTGGTGCAACACCAATTGGAGGCGGCGTTGGCCCTGGAGCGACACCGTTGCGTACTCCTAGAGATCACTTCTCTTTGAACCGAGACAGTGGTGGACAGCTTATCGGCAGCACCCCCAGGGATATCAAGATGCACGAGAAGTTTTCGCGCAACGACATTCGCAGCAAGCTGGCTCTTCTGCCAAAGCCGAAGGAGACCGAATGGGAATTGGAAGAACTTCCCTCGGAGCAGTCGGAGCCTACAGCGACAGTGGAGTATGTAGAGGAGGATGCCGCCGAGCGGGACAGAAGGGAAAACGAGGCCCGCGAAAAGATTGCCAAGGCTGAACATAAACGTCAATCTCAAGTGTACCAGCGGGCTCTGCCGCGACCAAGTGTCCTCGATATTGATGCGCTGATGCAGCGGGCTTCGCAGGTGACAGACTCTATCGATGGTGCGATTGCCAAGGAGGCTGCCCTTCTTATTGCCCACGATGCGCGGAAGTTCCCTGTCCCGAGTGCTAAGGTCGAAGGGAAGGCTAAAAGGCTAGAACGATTTGACGACAACTTGGTTGAATCCGCTCGTGCCGCCATCGCAAATAAGCTGGTTTCATCCCAACAGAAGGAGCAGCAAGAGGAATGGCAAGATGGGTTTGAAACCTCGTGGTCATCTACACACACCAATACCCTTCCGGGGCTCTCCAACTATGCCGACGACGAAGAAGACGATGCCTTCAGACAAGAGCAGCACATGATTGGTGCATTCGACAATGTGCAGGCCTCCCTGCTGGGCACCGCTGAAGGCGGCAACAAGATTGAAAAGAAACTTGCCCTGCATTTCGGTGGATACCAGAACCGCGCGAAGATGCTTCGGAACAAGATCATCGAAGCCAGCGGTGTCTTGGAGAGATCCAAGGATGACCTAGACTCCTTCCGTACCCTTCAAATTGCAGAGGAGTCCGCTCTTTCTCAGCGACTTAGCACACTCCGGGACGAAGTGGCCTTTGTCATGAAAAGGGAGCGTGAAGCTCAGGAAGTCTACAAGGCCCGGAAGGATGAGCTTGATGAACTTGTTGCAGGAATGGGGACAATGGCTAATGGGTGGCACTGA
Protein Sequence
MPVVKGGVWTNIEDEVLRAAVSKYGLNQWARVSSLLARKTPKQCKARWVEWLDPGIRKVEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDEAESRENDELGLGGPSGGEAAAPSADDVRRLRYAFAQLLLNPCIRTDAHRPGELDPDPESKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKRKARERQLEESRRLAVLQKRRELKNAGINIKVVTRKKGEMDYNADIPFEKPAAPGFYDTTEEEAKNERQREMFDPRKQQLANKRKGDQDDDAERKKRKNDKNNNAGASAAAARAGQMQKIREAEQSSKRRPLVLPAPQVGEGEMEDIIKMGMAGDKASKMSGDEETTRGLIGNYTSVVGQTPIRTPRAPPEEDHIANEIRNIRALNETQSSLLGGENNPLHEGGSSTGFEGIAPRRQQIVTPNPMATPFRQANGVGATPIGGGVGPGATPLRTPRDHFSLNRDSGGQLIGSTPRDIKMHEKFSRNDIRSKLALLPKPKETEWELEELPSEQSEPTATVEYVEEDAAERDRRENEAREKIAKAEHKRQSQVYQRALPRPSVLDIDALMQRASQVTDSIDGAIAKEAALLIAHDARKFPVPSAKVEGKAKRLERFDDNLVESARAAIANKLVSSQQKEQQEEWQDGFETSWSSTHTNTLPGLSNYADDEEDDAFRQEQHMIGAFDNVQASLLGTAEGGNKIEKKLALHFGGYQNRAKMLRNKIIEASGVLERSKDDLDSFRTLQIAEESALSQRLSTLRDEVAFVMKREREAQEVYKARKDELDELVAGMGTMANGWH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
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80% Identity
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