Basic Information

Gene Symbol
SPT23
Assembly
GCA_010014985.1
Location
JAAAKR010000227.1:67989-72392[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2 1.6e+04 -4.7 1.8 440 467 125 152 94 237 0.57
2 2 2.1e-09 2.7e-05 24.2 0.1 253 324 811 883 800 892 0.86

Sequence Information

Coding Sequence
atGGGCCCTGCGGAGGCGGCTGCTTCACCTGCGTTCCCCGTATTGGATCCAATCATCGTGGATGACGAGATGGAAAACGGCTACCAAGATGCGGATATGGAGTTTCTCGATCCGGCAAGACTGCAGATGTCGTCGGGAAGCGCTGGCCAGGATTTTGACGACCTCCTAAGACCTACCACGTCGTCTCGAGCCCTTACTGATTCCGAATCGGCGTGCTTGTCTCCGTCAGAATTGTCCGTCAAGCGAAATTATGCAGAGCAGGATCATTTGCGACAACCCCGCGTCATGTCTACCGATTCGCCCGTTGAATCGCCAGACAATTCGAGCCGGAGTTCCTCATCAGAGTCACCGCGCAATAACCACCTTCGACACTCGTCCGTCGCTTCCTCTACGTCTGCAGCCCAGGGCGAAAGCGCAATGATGCCGTTTGGCTATACGTCGTCGGAGGATTGGGTGAACCCTGATCTCGAGTCGGTCAAAGAGGAACCGATGTTTCGTCTGGAATCTTCGTCAATGCAGACCATGAACCATGGGATGCCGATGTTTGGCGATCTCGAATCGAGCAACAAAGCGATGGATGCCGCATTCGATTTTGAGAGTGCAGCCAGCAGTCCGAGTCCTTTGAGAACTGATGCAACCCCACAACcgaaaatatcaaaacgaTTCATTCCTCATCAGCGACGCTCCTCGAAGCACAGCAAGAATTCTCCATCTCCTCTTCCTACGTCGGGTTCTCCTTTCTTTACTCAAACGTCGCCTTTTCCGCGTGCGTCGCAAATTCCTCCACAAGGAAAACCGTCGCCTGCCAGCCAATGGGGCGGGCATTCTCCCTCATCACTCCTAGAGGAAAGTTTCGGAGGGATCAGTATGAATGGCGGCTCTCCCTTGAATCCGAATCTGAATTTTGGGCAAAACAGTTTCCCGTTCGGTATGAACTTCGCTTCGCCGCCGCAAAATAATATCCAACCGGAACCTCATCAGCGTCATATTTTAACCGTCCATCCTACCTCTTTGAAATCGCGCGTGGAGACACAGATTCCTATTCGATTGACTCTCTTTCCGCTACCTCCTGGCGTGAGAAAATTACGGTTACCCAGTCACACAATCTCAAAACCCAAGTTCCTTGCGCCTGCCAACACCGAAGCTTCGCCTGATACGATGGAATTGCACACCAGCCTGGTATGCACAAGTGCAATGCAGGACCAACAGAAACTCCATAGGGCGTTTGCCAGAGCGCGAGGCGAAATCTATTCTCTGTCAGATGATCTGCAGGAAGAAGATATGCCCTTGAATGGTGGAGAAGTGAAGATCTGCGCTGGCTGTATTCAACGTGAACGGAAACGTGCTTCCCGAAAGAAGCAAAGAAAACCCGAAGAAGATGAATTGTTCCAGAAGGATGAAGAAAAAAGAGTCATTGTGTTTAATACAAATGAACTCAAGGAGTGGACGGAAGCGTCAAAGAACGCCGTACCAAGCTATAGTGACGTTCCTCCTCCCACCATCCCAGCTGGTGCAATGCAGGTCGAGTTACCTATGCGGATCGCATGTTATTGCCGCCACCAGAATGAAAGACTTGGTTTTCAGGTCATTTTCACGGTCAAAGATTGGGTGGGCAATGTCGTTGCCCAAACAATAACGAATTCAATCATGATCACAGATGACCACAAAACCCATGCGCCATCTGCACCTCCCGCGCCTCCCGTCCCCGGTCCTTCTCCCGCTTTGTCCGATGGAACACAATTGCCTGGTGTTGGTGTGTTCCACTCGGGGACCAATGTCGATGCCACcaaagcaacacaaccgcCATTTCAATCTCCTTCGGCCACAGATTTGCAAAGTCTTCAGCAACGGCTGAACTCCCAAGTGCCTTCGGGGCCATTCTCTGTTCCTCAAAAAGCGGCGAATGGTGCGTCGAATCATCAGACATCGCGGAGTCTTTCGCGGCAGACATCTCCCAATGATTTCCAAGGACCGATTAGCAAACGACGAAAGCATAGCAGCTCAGCGAGACTTCCATCAGAGTTGACCATGACCAGACTGGAGAATGCCCAACCTTCTTCTAGTGGGGCAATCTCACAACCTATGAGTAATGACCCACAATTCTCCACAGCGCGTGCTTTTGCACCTCCGGCTGAGCGACCATTTGTGTCGCCAACTGCCATGCCTGGCCAGCTTGCAAATGGCCCGCCAACTCCAAACAGCAATGAGAACAACCCATTCTTCAACTCGAATGCACAGCGCTCAACACTGGATAGCATAGTGCAACAACAATTGATATCGGCACCCAACTCAGCCCAACCCAGTCGTCCTGGATCTCCTGGGAACTCGGGCCGTAATAGCTTCCAGGAACAGAGTCTAAACCTCCTTGGTCCAAGTCCGTCAACACCGATGTGGCCTCCTTTGACGAATGCAGGAAACCGGTTGCCATCCGTCATCCACAAGCTGGTACCTGCAGAAGGCTCTATCACTGGAGGAACAGAGGTCACGCTGCTGGGAAGCGGTTTCTATCCCGGTATGGAAGTGGTTTTCGGCGATACACTCGCCACAACAACAACTTTCTGGGGTGATAAATGTCTCAATTGCTTGACCCCGCCCGCCCTGCAGCCGGGTCTGGTGGCCGTCGTTTTCAAGCATGAACACCCGACATTCGGTCAAATCCAGCCAACCCAGCCTCTGATACCGAAACAACAGCAATTCTTCCGTTATGTCGATGACCGTGAGCTTCAAATGTACCGCCTCGCTCTTGGTATCCTTGGGCAGAAGCTGGGAAGCCAAGCAGATGCGTTCCAGACGGCTCAGCAGATCATGGGTAGCGACCCTAAGGCCATCTTCAATCTCCACAAGGACTACCAACCTGGCTCTGGCGGAGGTCATCAACGGCAGGTCCCCGGATTGGAATCACAGGGTCAATTAACCGATCTGGACTCGAAGATGCTGACATATCTCGAGTTCGTTGACCTTGATGATAGCCCACGTCCACCCAAGTACAACGCACGTTGTGGAACAGGACAAACTCTTCTTCATTTCGCATCGTCGTTGGGATTGACTCGATTTGTTGCCGGGCTCCTTGCTCGAGGTGCCAGTGCGGATGTACAGGACAACTCCGGAAATACGCCAATGCACCTGGCAGCCCTTAATGGCCATGCGCACATTGTCCACCGGCTTCGTTTGGCCGGTGCAAGCCCTAGTATCCGCAGCGTCAGGAACTTCACGTCAGCCGACATCGCATCGACATTGCCTGCCCACCAGGCGGCATTGCTACCATCGCGCCACTATCGCTCGCGTAGCGTTGGGTCTTTGGCATCATCCCGGCCCCGGAGAAGCAGTTCTGCATCGCTTCACTCTCTTTGGGAAGGTCCTTCAGATTCCAGCTCATTCGATAATGCTGTTGAGGACTCCGATGACTTGGAAGAGGATGACAGTGCCGACTCAGAAGTCGAGCATGACGCTCAGTCTCGACGATCGAGTGCTCACCAGGATAGTCAGCCTCCACTCACATCTGAAAGCACGGATTCGCCCGAAGATGCGTCCGCATTCTCCCCTCCGGCAGCGCTTGTTGCGTGGCGGAACCAGCTTCAGACTCAAATCAATCAGTTCCAACAGAGCGTTGCCAATGTATTCCCTAACTTGCCTGCTTTGCCTCCTATGCCAACATTGCCTGATTACCAAGCGCACCCGATGATGCGCCGTATAACCAACCTGGTTCCCAATCGGCCAACCGCTTCGTGGCCGACAAGAGACGGCTGGTGGGATCTGCTCAAGGGCAACAACTCGGCACCCAGTACAACGGAACTGCCATCATATGAGGAGCTTTACCCACGGAAAGAGGAGACCGAGGAAGAGGCGTCGGAAGTGAAGAAGACCTCCATGCTGCGGGCAGCCACTGAGGCAGTGGTGGACCAACATTTCGAAGCACAAAGCAGTCGGTCACAGGTCCCCGCCGTCACGGAGGACAAAGAGGACCTCAAAGATATCCGAATTGGTCGCAAAGTCATCTCTCGCGAGCAGCAAAAGCATCTCAGAGCCCAGCAAGCGCAGAGAATGAAGGGACTAGGCAGTGATCGGAAGTTGTATTTCATCTGGATCCCTCTTTTGCTGTTGGTCGTTTGCGCCTGGATTCGAAACTATGTTCCAGGCATTTGGCATGCGGTTTCAAGCGGATATGAGTTTGTGAAGACTCGTTATGCGCAAGACGCTCTGGAAGCTGGCGTGTAA
Protein Sequence
MGPAEAAASPAFPVLDPIIVDDEMENGYQDADMEFLDPARLQMSSGSAGQDFDDLLRPTTSSRALTDSESACLSPSELSVKRNYAEQDHLRQPRVMSTDSPVESPDNSSRSSSSESPRNNHLRHSSVASSTSAAQGESAMMPFGYTSSEDWVNPDLESVKEEPMFRLESSSMQTMNHGMPMFGDLESSNKAMDAAFDFESAASSPSPLRTDATPQPKISKRFIPHQRRSSKHSKNSPSPLPTSGSPFFTQTSPFPRASQIPPQGKPSPASQWGGHSPSSLLEESFGGISMNGGSPLNPNLNFGQNSFPFGMNFASPPQNNIQPEPHQRHILTVHPTSLKSRVETQIPIRLTLFPLPPGVRKLRLPSHTISKPKFLAPANTEASPDTMELHTSLVCTSAMQDQQKLHRAFARARGEIYSLSDDLQEEDMPLNGGEVKICAGCIQRERKRASRKKQRKPEEDELFQKDEEKRVIVFNTNELKEWTEASKNAVPSYSDVPPPTIPAGAMQVELPMRIACYCRHQNERLGFQVIFTVKDWVGNVVAQTITNSIMITDDHKTHAPSAPPAPPVPGPSPALSDGTQLPGVGVFHSGTNVDATKATQPPFQSPSATDLQSLQQRLNSQVPSGPFSVPQKAANGASNHQTSRSLSRQTSPNDFQGPISKRRKHSSSARLPSELTMTRLENAQPSSSGAISQPMSNDPQFSTARAFAPPAERPFVSPTAMPGQLANGPPTPNSNENNPFFNSNAQRSTLDSIVQQQLISAPNSAQPSRPGSPGNSGRNSFQEQSLNLLGPSPSTPMWPPLTNAGNRLPSVIHKLVPAEGSITGGTEVTLLGSGFYPGMEVVFGDTLATTTTFWGDKCLNCLTPPALQPGLVAVVFKHEHPTFGQIQPTQPLIPKQQQFFRYVDDRELQMYRLALGILGQKLGSQADAFQTAQQIMGSDPKAIFNLHKDYQPGSGGGHQRQVPGLESQGQLTDLDSKMLTYLEFVDLDDSPRPPKYNARCGTGQTLLHFASSLGLTRFVAGLLARGASADVQDNSGNTPMHLAALNGHAHIVHRLRLAGASPSIRSVRNFTSADIASTLPAHQAALLPSRHYRSRSVGSLASSRPRRSSSASLHSLWEGPSDSSSFDNAVEDSDDLEEDDSADSEVEHDAQSRRSSAHQDSQPPLTSESTDSPEDASAFSPPAALVAWRNQLQTQINQFQQSVANVFPNLPALPPMPTLPDYQAHPMMRRITNLVPNRPTASWPTRDGWWDLLKGNNSAPSTTELPSYEELYPRKEETEEEASEVKKTSMLRAATEAVVDQHFEAQSSRSQVPAVTEDKEDLKDIRIGRKVISREQQKHLRAQQAQRMKGLGSDRKLYFIWIPLLLLVVCAWIRNYVPGIWHAVSSGYEFVKTRYAQDALEAGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-