Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_010014985.1
Location
JAAAKR010000701.1:65199-67166[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-22 2.7e-18 67.6 0.0 1 89 16 101 16 101 0.94

Sequence Information

Coding Sequence
ATGGGAAAAACTCAAATAAACACCAAGTCAAGGGAGTATATTAACGACAAGGAGACATTTCTTAAGGACTTAAAACAGTTTAATGAGAGTAAAAATATACCATACCGAGTACCAGTAGTGAATGGTGtggaaattgatttatttctacTTTATTCATTAGTACAACAAAAAGGTGGCTTAAGTAGAgtAAATCAAACAGACACATGGGAATCGTTTCTGCGATTGTTGAAGTTGCCTCACCCATGTGTTAATGGATCTACATTGTTAAGAAGGATCTATGGCATGTATCTCGAAAAatatGAACGAGCAAAAGGTCCACCTGGCAGAGATGACGATAATGACATAGAAGAAGATCCAAGAAGAAGCCGTAGCAGTGGCATACCTAGAATTAGTTTTGGTAGTGGCACTTATATTTCtgCATCAGGTGAACAATTAAAGACAACTACACCTAAATTTGCTGGCCCATCAGAGAGGCTAACCCTATCCTTATTATCACCGATGCCAAATGAACAGGATTTTGCAATCAATGTATGCACTGTTTTGGCTGCTGACCATTCAAACAGACTTCCTTTAAGCTCAACACCTCATATATTGGATTTTTTGTTGGCCCATGCTGGAGTTTATAACCATTCCAGTCTTCGAGATACGATTGGTCGTTCATACTACGAAGCCCGGGGGCGATATCCTCACGATTTTTGGGAATTGCGCGCTGGTGGAGGCGGTGCTAAGGAATTGGCAGATGAAACTAAGTTTATGCAGCCGGGCATTGAACAGCCAGAGTTGATGGTGCAAGCGTTAGCAGCACATAACACACTCACCGATTGTTTGATAAACAGTGGAAACGGTGATGAAGTACTGGATAAAATTGTTGAAGatgtaagtttatataaatctaatgcATTTCCAATAATTTAA
Protein Sequence
MGKTQINTKSREYINDKETFLKDLKQFNESKNIPYRVPVVNGVEIDLFLLYSLVQQKGGLSRVNQTDTWESFLRLLKLPHPCVNGSTLLRRIYGMYLEKYERAKGPPGRDDDNDIEEDPRRSRSSGIPRISFGSGTYISASGEQLKTTTPKFAGPSERLTLSLLSPMPNEQDFAINVCTVLAADHSNRLPLSSTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPHDFWELRAGGGGAKELADETKFMQPGIEQPELMVQALAAHNTLTDCLINSGNGDEVLDKIVEDVSLYKSNAFPII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-