Basic Information

Gene Symbol
lid2
Assembly
GCA_010014985.1
Location
JAAAKR010000767.1:32765651-32771112[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-28 9.9e-25 88.2 0.1 3 89 144 229 142 229 0.95

Sequence Information

Coding Sequence
ATGGTGGCTCCGGCCTCAACGGGTGGAAACGCGGCGGGTGCTCAGCCGGCCGCAAGTCGTGCGCCCACTCGTTCCTCCAGCACCCATCCTTCGCATGCCCATAATGTCCCGTTAAGCGCTCGACGGTCTGCTCCCCTTGATTTATCCACGGTGGAACGACGAGGCCAGCCTATGAATCCGCGTGATCCTGTGAAGCGCTCCCGTCCTCACGGCTTACAAGAGGCCCCGACGTTCTATCCCACCGAGGAAGACTTCAAAGATCCCGTGGCATACATTCAGAAAATCGCTCCAGATGGAAAGAGATTTGGAATTTGCAGGGTTGTTCCGCCGGAAAATTGGCAACCAACCTTTGCGATTGATACCGAGCGCTTTCACTTCAAAACTCGTCGACAAGAACTAAACTCTGTCGAAGGAGGAACCCGTGCAAACTTGAACTACCTCGACCAATTAGCCAAATTTCACAAGCAACATGGCACCAACCTCAACCGATTCCCCAGCGTTGACAAGCGTCCCTTGGACCTGTACAAGCTCAAAAAAGCAGTCGAAGCTCGCGGTGGCTTCGAAACGGTTTGCAAGACAAAGAAGTGGGCGGAGATTGGCCGTGACTTGGGTTACAGCGGCAAAATCATGTCCTCTCTTTCTACGTCGCTCAAAAACTCGTATCAAAGGTGGCTCCAGCCCTACGAGGAGTATCTTCGGGTGGCCAAACCCGGGGTGCAGCAGCAGCTGGAGATTGAGAACGGTGGCCCATTGACGCCATCCCCGCATCAATCCCCCTTGAGCAGAAGATCTTTGCCAGTCGACAGTCTTCCGCCACCAAATGTATACCAGCGACCGCCTGTCATGTCAACGGCGCCCGCGCACAGTACTCCCAAGGAAGTTGAAGCCAGCCCTGATAAACCGACACCCCCGGCGGAGCCAGCACCTTCGCGTCCTATTGCGTCAGGGTTTACCCCAGTGAACGCTAACTCTGGCGGTTTTACCGCTGTCAATCAGGCTCCATCGTTCGTTGCGGCGAATAACGGCCCGGCCGTCAAGCGGGAACCAGAGAATGGGACCGCCATATCCCAGGGTGTTGCTGAGCATTCCCAGAGCTCAACTCCAGTCCCAAATGGGCATGGTGAGAATGGTCCGAAGCGGGGAGCAAGCCTCGACAGTAATTCTCAAACGGAGAATGGCGACGATAGTGGCAGCGGCCGGCGAAGCAAGCGTCTCAAGAAAGATTCGCTACCCAACGTTGCTGGCAATCATATGGGCCTCATGCGTCCTACCCCCCCTGGGTCTCGTAAAAGCGACAGCGCAAACCGGAAAACTGGGGAGGTGCGTGGGGATTTCGCAAACGAGCTTGGCCTTGATACGGATGCTGAATCTGTGAAGAAGTGTGAGGCTTGTGGTTCCTCAGACGATAACAATTCGATTCTGGTTTGCGACAGTTGCGACGTGGGGTATCATAGCTCCTGTCTTGACCCGCCTGTCACCACTGCTCCTGAGTACGATTGGCACTGCCCTAAGTGCTTGGTTGGCACAGGAGAATTTGGCTTTGAAGAGGGTGGAGTCTACTCCTTGAAGCAGTTCCAGGAGAAAGCGAATGAGTTTAAGAAGAATTACTTCGCTTCAAAAATGCCATTTGACCCTGTTCTCAATACGCACCGGCTCGAAACCGAAGATGATGTCGAACGCGAATTCTGGAAATTAGTGGAAAGCCTCACGGAGACCGTCGAAGTCGAGTACGGTGCTGATATCCACTCCACGACTCATGGCAGTGGATTTCCCACCATTGAAAGGAATCCCCTTGACCCGTACTCAGTCGATCCTTGGAACCTTAACGTCCTTCCTTTCCACGGCGACTCGCTGTTCCGTCATATCAAAACTGATATCTCTGGTATGACCGTTCCTTGGGTCTATGTTGGCATGTGCTTTTCGACCTTTTGCTGGCACAATGAAGATCACTACGCCTACTCGGCCAACTACCAGCACTTTGGTGCTACCAAGACCTGGTATGGGATTCCTGGGGCGGAGGCAATGGCCTTTGAGGAAGCGATGCGGCAAGCCGTTCCGGAACTGTTCGAAGGCCAGCCGGATCTCCTCTTCCAGCTGGTCACTCTCATGCCACCGGACCAACTTCGAAAGGCAGGCGTCAATGTCTATGCTGTTGACCAGCGGGCTGGCCAGTTTGTGCTCACCTTCCCTCAAGCTTACCATGCTGGGTTCAATCACGGGTTTAACTTCAATGAAGCCGTCAACTTCGCCCCTGTGGATTGGGAGCCTTGGGGTGCAATGGGTGTGGAGCGTTTGCAGGCGTTCCGGAGGCACCCTTGCTTCTCGCACGATGAATTACTCGTTACGACGGCCGAACGAGATTCGACCATTGAAACAGCCAAATGGTTGGCCCCAGCCCTCCAGCGGACCTGCGTTCGGGAGCTTCGTGAGCGTGCGGCTTTTTTTGCTTGGCACCGGGACATCGTGCCTCATAAATGCATGCTTGGTATCGAAGGTGATCCTTCTGCCGGTGACTGCCAACTTGAATTTGTCACGGAGAACGAAGATCTGCCTGAAGAAGACTACCAGTGCCAACACTGCAAATCATACACCTATTTGACGCAGTTTCGCTGCCATACGTCTGGAAAGACAGTCTGTTTACAGCATGTGGAACTCTATGATTGCTGCGGGCAACCTCTGGCACAGAGACTATTGGGCCCAGACCACACTTTCCGCTACCGGATAAGTGACGCCGACTTGAAGGCCTTGGTCCAGAAGGTTGAAGAACGTGCCAGGATCCCGGGAGCGTGGGGAGAGAAGCGCGACAAGTACCTGGAGGGCGAACCGAAACCCCAACTGAAGGTTCTTCATAACCTCCTGAACGAAGGTGAGAAAATCCCATACCATCTGCCTGGTCTCCAAGATCTTGCCGCGTTCGTCCAGCGCTGTGACAAGTGGGTTGAAGAAGCCAACAACTACATCACCCGGAAGCAGCAGAACCGGAGAAAAAACGAAAAAGCTTGGCGCAAGGGAACTTCTAAAGCCGCGCAGCTGGAAGAACGTGATCGTGAAGTTCGCAGAGTTGAATCCATCTACGCGCTTCTTGCAGAGGCTGATAAACTTTCCTTCGACTGTCCACAGATGGCGGCCCTGGAAGAGAAGACCCGCGAAATCGAGAAATTCCGCCAGGATGTTAACGCTACCCTCATGAACCCCCACATCCGATCGGTCCAGGAAGTTGAggggatattggaggccgGCCGCAATTTCAACGTGGAAATCCCCGAGGTCGAGGGGTTAGAGCATATGCTCCGGCAACTGAAATGGAATGACGAAGCGCGTGGCAAGCGCGACAAATATATGACCCTCCATGAGTGCCAGGAGCTCATTCTAGCCGGCGAGCAACTGGGACTCATGGACAACAACAATGATCATCTGCTTTATTTTAAGGATCTCTGTCGCCATGGAGAAGCGTGGGAGTCGAAGGCTAAGGAACTCATGTCTGTGGAAGCCGTCCACTATCAGCAACTTGAATCGTTGTCGGCGCAGGCGACGCGCTTCCCCGTGACTCCCGAGACATTGGCTGCGGTCGATGCGATCTTGACCAAGCAGCGGGAGGCGCAAAAACGGATCCAGAGTCTTTACGAGAGAAGCAGGGACCCGGATTTCCGACAACGGCCATCATACAGGGAAGTCCGGGAACTTATGGAGTCTCTGGAGGGCCTAAACAGCCGTCCAACGGGCGCCCTTGATCTGGAGCGCGAGCAGAAGCGGCATGAGGACTGGATGCGAAAGGGAAAGAAGTTATTCGGGAAAGCCAATGCTCCGCTGCACATTCTGAGATCGCATATGGAGTACGTGGAAAAGAGGAACTCGTACTGTTTCGATCTGGATGATCGTTATCGACCGCCGGTGGAGCCTGCGTCGCGAGATAACACCCCCGATGGTATTTTGGAGAATCACCATGGTAGCGTGTGGGGTGGTAAATCGCGGAAGCGAGACGTTTTTTGCATTTGCAGGCATTCGGAGGCAGGGATGATGATTGAATGTGAAATATGTCACGAATGGTACCACGGCAAATGTCTGAAAATCGCACGGGGCAAGGTCAAGGAGTTTGACAAGTATACCTGTCCTATCTGCGACTGGCGTCAAAAGATCCCTAGGGATGCTGCCCGGCCCAAATTGGAAGACCTTCAAGACTGGCATGCTGAGCTTCGTGAACTTCCTTTTCAACCAGAAGAAGAGCAGATCTTGGAAAACATTCTTAACCAAGCGATTGCCTTTCGAGACTTTATTCAGTCGTTCACCATGGCGGCTTGTACTACGACTGAGGAAGTTCCGACATTGATCTTCTATTTGCGAAAGATTGAAGGGGCCGAGGTGCTTCTCGCGTACGAAACGAACTTCTTCCGGCAGGAGATTCACAAATGGGCGCCTGTTGCGCCGGAACCCCCACCGATCTTGGAGCAGTCACTTTCGACAAGAAAGCCTCGCCCGACGAAGCAACAGAAGATCATGGCGCAGCTGGGCATTGAGCGTCCGGAGGATCTTCCGCCTCATTTGCGGCCGAAGCAGCCTACTCATGTCAAGCGCAAGTCTATGGAGTCGCCACAGTCTAGTCGGCCGTCTCTGGTCCCGCAAACGGCTCAGACGCCTGGTGGCACGCAGACTACGGCTGCAGGGGGTCCGACGTTGACGCCGATGTCTGACACGCAGAACCAGCCTTATCCCTTTTCTGCAAGCTACTCTCTTACGGCGAATGACTCGACACCGGCATTTACATCTGGCTCGTCGGCTTTCTTGCCTCATGTCGCGGCGCAATCTCCGTCCTTCCCTCCACGTTCTCCATCGCCACCACGTCAGGCACTGGACAATTCGCTTTTCAGTTCACCTCGGTTCCACCGGGAGCATGCAGAGGGACCACCGGGTGTCGATGTTGAAAACAATAACCCGTTTGGCAGCAGTCCCCGCCAAAACTTGGATGATGTGTTCGCAGACCTGACAAACCAGGATGCGGAGCCTGAGGCCGAGCCCGAACGGGAGCCAGAACCGATGGAGAACACACATGCCAACGAAGCACTGGAAGTTCTTGATGCGAGTATCGGGGACGGTGCGGGTCCTATGCAGGTTGAGGAGCCGCCGAGTGAGAGTGCCAATGACGGAGCGAATGGTCAGCATGAAAGCAATGGTACGGAGGGTGCTTGA
Protein Sequence
MVAPASTGGNAAGAQPAASRAPTRSSSTHPSHAHNVPLSARRSAPLDLSTVERRGQPMNPRDPVKRSRPHGLQEAPTFYPTEEDFKDPVAYIQKIAPDGKRFGICRVVPPENWQPTFAIDTERFHFKTRRQELNSVEGGTRANLNYLDQLAKFHKQHGTNLNRFPSVDKRPLDLYKLKKAVEARGGFETVCKTKKWAEIGRDLGYSGKIMSSLSTSLKNSYQRWLQPYEEYLRVAKPGVQQQLEIENGGPLTPSPHQSPLSRRSLPVDSLPPPNVYQRPPVMSTAPAHSTPKEVEASPDKPTPPAEPAPSRPIASGFTPVNANSGGFTAVNQAPSFVAANNGPAVKREPENGTAISQGVAEHSQSSTPVPNGHGENGPKRGASLDSNSQTENGDDSGSGRRSKRLKKDSLPNVAGNHMGLMRPTPPGSRKSDSANRKTGEVRGDFANELGLDTDAESVKKCEACGSSDDNNSILVCDSCDVGYHSSCLDPPVTTAPEYDWHCPKCLVGTGEFGFEEGGVYSLKQFQEKANEFKKNYFASKMPFDPVLNTHRLETEDDVEREFWKLVESLTETVEVEYGADIHSTTHGSGFPTIERNPLDPYSVDPWNLNVLPFHGDSLFRHIKTDISGMTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGAEAMAFEEAMRQAVPELFEGQPDLLFQLVTLMPPDQLRKAGVNVYAVDQRAGQFVLTFPQAYHAGFNHGFNFNEAVNFAPVDWEPWGAMGVERLQAFRRHPCFSHDELLVTTAERDSTIETAKWLAPALQRTCVRELRERAAFFAWHRDIVPHKCMLGIEGDPSAGDCQLEFVTENEDLPEEDYQCQHCKSYTYLTQFRCHTSGKTVCLQHVELYDCCGQPLAQRLLGPDHTFRYRISDADLKALVQKVEERARIPGAWGEKRDKYLEGEPKPQLKVLHNLLNEGEKIPYHLPGLQDLAAFVQRCDKWVEEANNYITRKQQNRRKNEKAWRKGTSKAAQLEERDREVRRVESIYALLAEADKLSFDCPQMAALEEKTREIEKFRQDVNATLMNPHIRSVQEVEGILEAGRNFNVEIPEVEGLEHMLRQLKWNDEARGKRDKYMTLHECQELILAGEQLGLMDNNNDHLLYFKDLCRHGEAWESKAKELMSVEAVHYQQLESLSAQATRFPVTPETLAAVDAILTKQREAQKRIQSLYERSRDPDFRQRPSYREVRELMESLEGLNSRPTGALDLEREQKRHEDWMRKGKKLFGKANAPLHILRSHMEYVEKRNSYCFDLDDRYRPPVEPASRDNTPDGILENHHGSVWGGKSRKRDVFCICRHSEAGMMIECEICHEWYHGKCLKIARGKVKEFDKYTCPICDWRQKIPRDAARPKLEDLQDWHAELRELPFQPEEEQILENILNQAIAFRDFIQSFTMAACTTTEEVPTLIFYLRKIEGAEVLLAYETNFFRQEIHKWAPVAPEPPPILEQSLSTRKPRPTKQQKIMAQLGIERPEDLPPHLRPKQPTHVKRKSMESPQSSRPSLVPQTAQTPGGTQTTAAGGPTLTPMSDTQNQPYPFSASYSLTANDSTPAFTSGSSAFLPHVAAQSPSFPPRSPSPPRQALDNSLFSSPRFHREHAEGPPGVDVENNNPFGSSPRQNLDDVFADLTNQDAEPEAEPEREPEPMENTHANEALEVLDASIGDGAGPMQVEEPPSESANDGANGQHESNGTEGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00180227; iTF_01496341;
90% Identity
-
80% Identity
-