Dero008412.1
Basic Information
- Insect
- Deinopsis erosa
- Gene Symbol
- nfxl1
- Assembly
- GCA_027574845.2
- Location
- JAODFZ020017554.1:2837-4114[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2 2.2e+04 -6.6 5.6 15 19 157 161 156 161 0.81 2 10 0.044 4.9e+02 1.2 0.3 4 10 192 198 191 199 0.95 3 10 4e-08 0.00044 20.5 14.6 1 19 206 223 206 223 0.99 4 10 2 2.2e+04 -5.9 2.9 10 13 230 233 229 233 0.69 5 10 0.85 9.6e+03 -2.9 1.3 6 10 249 253 248 253 0.86 6 10 2.7e-09 3.1e-05 24.2 13.0 1 19 259 277 259 277 0.97 7 10 0.57 6.4e+03 -2.4 1.3 6 10 302 306 301 306 0.89 8 10 1.5e-08 0.00017 21.8 10.3 1 18 312 329 312 330 0.97 9 10 2 2.2e+04 -6.0 4.7 6 10 355 359 354 359 0.93 10 10 1.8e-09 2e-05 24.8 8.6 1 17 365 381 365 381 0.96
Sequence Information
- Coding Sequence
- ATGTTAAGAAATTACAGTAAGGCATTAGATGGTAATAAATCATTACGAACAATGCCTAAGAATAAGATAAATAATACTGCCGAGGCGAAATTTAAAGAAAGTCAATTGAAGTTGCAAAAAGCTGTGGAACGGTTTGGAAATGAAGGCGAATCATCGGATGAAGATGATTTGGAATCTGCTGACGTTATTgATTTAACTTTAAAACGATATAACTTAACCAGTGACAATAATGAAGGATTTATATCGAAAACAAAGCTATTTCTTGAAGAAACATTCCAATCTGGTGCGATTACATGCCTTATATGTATATCatcaattaaaagaaatgaatctAATTGGAATTGTTCTGAATGTTACTGCATGTTTCACTTAATGTGCATCCAAAGATGGTCGAAAGACACAATAATGCAAAGAAAGAACGCGTTAGAAGATCGCATCCAAGTTAAAAAGATGATAATTAATTGGTGCTGTCCGAAATGTCGTCATGAATACCAACCAGACAATATTCCGCACGATTACTTCTGTTTCTGTAAGAAATTAAAGAATCCAGTCTTTCAACCTCTAATAATACCACATTCATGTGGTGAAACATGCGGAAAACCTTTAAAACCTGAATGCGGTCATCGCTGTCTATTATTATGCCATCCAGGTCCTTGTCCAGCTTGTCCACAAACCGTTACTGTGTCATGCCATTGCGGAACTTCCCCCGCCCGACCGCAACGTTGCTGTAACAAATATTGGTCGTGCAGTCAAAAATGCAACAAGCTATTAGCGTGTGGAAAGCATAAATGCACTGATATGTGCCATCCAGGTGATTGTAAGTCTTGCACTAAGAAATCCTTGCAGAAGTGTCTTTGTGGTGCGGAGATTGTAATGAGGGATTGTTCAAGTCCACAATGGCAATGCAGTAAAGTATGTGATAAGCCTTTAGGATGTGGATATCACAAGTGCCTTGAAATATGCCATCCAGGCGAATGTGTTCAATGTGATAGTAATCAAAGTAGATCTTGTCCTTGTGGTAAAACGTTTACTAAAGCATTATGCTATGTTGATATACCTTGCTGTGAGAAGATATGCGATAAGCTATTGGAATGTGGGATTCATCGGTGTGTACAAGTTTGTCATAAAGGAAACTGCCAAACGGTATGa
- Protein Sequence
- MLRNYSKALDGNKSLRTMPKNKINNTAEAKFKESQLKLQKAVERFGNEGESSDEDDLESADVIDLTLKRYNLTSDNNEGFISKTKLFLEETFQSGAITCLICISSIKRNESNWNCSECYCMFHLMCIQRWSKDTIMQRKNALEDRIQVKKMIINWCCPKCRHEYQPDNIPHDYFCFCKKLKNPVFQPLIIPHSCGETCGKPLKPECGHRCLLLCHPGPCPACPQTVTVSCHCGTSPARPQRCCNKYWSCSQKCNKLLACGKHKCTDMCHPGDCKSCTKKSLQKCLCGAEIVMRDCSSPQWQCSKVCDKPLGCGYHKCLEICHPGECVQCDSNQSRSCPCGKTFTKALCYVDIPCCEKICDKLLECGIHRCVQVCHKGNCQTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -