Basic Information

Insect: Deinopsis erosa
Gene Symbol: -
Assembly: GCA_027574845.2
Location: JAODFZ020002252.1:2347-4200[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.4e-05 0.0073 17.0 3.5 1 23 356 378 356 378 0.95

2 9 4.3e-05 0.0042 17.8 1.9 1 20 394 413 394 415 0.91

3 9 0.0068 0.67 10.8 5.2 1 23 422 445 422 445 0.96

4 9 0.00036 0.035 14.9 0.1 3 23 453 473 451 473 0.96

5 9 3.6e-05 0.0036 18.0 4.3 1 23 479 501 479 501 0.97

6 9 1.8e-05 0.0018 18.9 0.8 1 23 507 529 507 529 0.95

7 9 2.9e-06 0.00029 21.4 1.2 1 23 535 557 535 557 0.97

8 9 2.2 2.2e+02 2.9 1.8 2 23 565 584 564 584 0.83

9 9 4.2e-05 0.0042 17.8 2.5 1 23 590 613 590 613 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.4e-05	0.0073	17.0	3.5	1	23	356	378	356	378	0.95
2	9	4.3e-05	0.0042	17.8	1.9	1	20	394	413	394	415	0.91
3	9	0.0068	0.67	10.8	5.2	1	23	422	445	422	445	0.96
4	9	0.00036	0.035	14.9	0.1	3	23	453	473	451	473	0.96
5	9	3.6e-05	0.0036	18.0	4.3	1	23	479	501	479	501	0.97
6	9	1.8e-05	0.0018	18.9	0.8	1	23	507	529	507	529	0.95
7	9	2.9e-06	0.00029	21.4	1.2	1	23	535	557	535	557	0.97
8	9	2.2	2.2e+02	2.9	1.8	2	23	565	584	564	584	0.83
9	9	4.2e-05	0.0042	17.8	2.5	1	23	590	613	590	613	0.97

Sequence Information

Coding Sequence: ATGCCAAATAAAGCGTTTTATCAAGATAATTATTATCCTAGACCACAATGCGCTCAAAATTCATCATCTCAACAATACGTACCATTCCCTATGCTATCAAATGGAACGTTCAGCTCCCAAACATCGCATATGTTCGATATGATGTATTCCAACAAAAACCAATATCTACAAAGCACTTCAAATATTTACGAACAGGAAAATTGGATACCAGATAGTCGATTAATGAATGATGTAGAGAAAGGATTCAAATTTTCGGATAAAatcgaaacaattgaaatatcaAGTAAGGACTTAAGCCCAGCCAGCTGTTGCAGCAACTTGGACATGCTGTTGCCAGATTTTTATAAGAATCCATCGAATTCACAATtcctattttataattacaataagAATTATGTTGATTATCCATCATGCTCACAATTAAATAACGATCAGGGATTTGGGGATAAAACTGTAAAGTACTGCAGCATACAGAAGCCTAACAACTCGAGCTGTGATATAAATTCATCATTtactgaatttaattattataacgcTGATACGCTTTTAACACCTGATGCAATACCGTTCGATTCAGTGCCAAGTTTAGATCAACGCACAGAAGAAAGTAATGACAGTGATATTGTGGTTGAAGAATCGGATGAAGAAGCAGCAACTGAATTTGGAGATGttattgaaaagaaatttaattgtatgatTTGTAATGTTACTTATTCACCTATAGgaagtcaattttattttttatcgcTCGAAAATCCTCTAACAATGTCTTCACAGAAATCGGTTTATACAAAACTTCGAAGATTGTTAGGTGATTTTAGTGCAAAAACAAAGTGCAATTATATTTGTAGCCATTGTCTGAGTTTAATCAATACAATTGATCATTTAGAAATGAAGTTGGATGAATGCCGTCGCGATTTAgtacaaaaatatgaaaaaactaataatgtaaaaaataatattgattttgtgTCTCAGAATTTTAAATGTGATTGGTGCTGTAAATGCTTCACATTTGAAAAGTTCTGTAAGATGCATTTGAACaaacattcaattataaatcgTTTTTTATGTGAGTTTTGTGGAAAGAGATTCACAAagctacaaaattttaaattacataccaAAACGCATCGAATTCAATTGACTACTAAACGGAAAAGTGTTAGAATTGAAgcgtttttatgtaaaatatgtcATAAAGCATTTCGTACGCGCACTAATTTAAAGGACCATGAAAATTTCTGCTCTGGGAAATTACCATACAAATGTCGTCATTGTAGTAAGAAATTTGCCACAATAACAAAGATGAAAAATCATGTAAAGTTGAAACACGAAAAGAAATTCTCTTCGATTTGCTCAATTTGCAATATTGGGTTTATAAAAGCATCGGATTATAAAACACACATGGTTTCTCATAGCACAGATAAAAAGTACTCTTGCAATAAATGTGACAAATCATATAAGACATTAAGcaatttgaaatttcatatgaaattccATGAGGAGAAGCTTCCTTTTTTATGTCGCATTTGTGATAAGGGTTTCATGAGAAAGGAGTATTTGGAATCTCATATGAGTTCACATACAGGCGAGAAGAATTACTCTTGCTCCATTTGTGGAAAGAAATTCGTCAGTCAGAAAAATTTAGATGCGCACTTTAAACAACACGATGGAagtattaaaaagaaatcgtGTAACATTTGTGGTAAATTAATAGCTAAAGGCTTGGAGGACCATTTAAGGACTCatactaatttaaaagaatttgaaTGTGATAAATGTGAAATGCGCTTCAATACAAAAGGAGCTCTATTTAAACACCGTAAGCGAAAACATGAAGATgaaagttaa
Protein Sequence: MPNKAFYQDNYYPRPQCAQNSSSQQYVPFPMLSNGTFSSQTSHMFDMMYSNKNQYLQSTSNIYEQENWIPDSRLMNDVEKGFKFSDKIETIEISSKDLSPASCCSNLDMLLPDFYKNPSNSQFLFYNYNKNYVDYPSCSQLNNDQGFGDKTVKYCSIQKPNNSSCDINSSFTEFNYYNADTLLTPDAIPFDSVPSLDQRTEESNDSDIVVEESDEEAATEFGDVIEKKFNCMICNVTYSPIGSQFYFLSLENPLTMSSQKSVYTKLRRLLGDFSAKTKCNYICSHCLSLINTIDHLEMKLDECRRDLVQKYEKTNNVKNNIDFVSQNFKCDWCCKCFTFEKFCKMHLNKHSIINRFLCEFCGKRFTKLQNFKLHTKTHRIQLTTKRKSVRIEAFLCKICHKAFRTRTNLKDHENFCSGKLPYKCRHCSKKFATITKMKNHVKLKHEKKFSSICSICNIGFIKASDYKTHMVSHSTDKKYSCNKCDKSYKTLSNLKFHMKFHEEKLPFLCRICDKGFMRKEYLESHMSSHTGEKNYSCSICGKKFVSQKNLDAHFKQHDGSIKKKSCNICGKLIAKGLEDHLRTHTNLKEFECDKCEMRFNTKGALFKHRKRKHEDES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -