Dero010593.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Deinopsis erosa
Gene Symbol
zfh1
Assembly
GCA_027574845.2
Location
JAODFZ020022173.1:3906-9063[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.0052 0.51 11.2 2.2 2 23 54 76 53 76 0.96
2 9 0.00049 0.049 14.4 0.4 3 23 108 128 106 128 0.95
3 9 6.4e-06 0.00063 20.4 0.6 2 23 135 156 134 156 0.97
4 9 1.2e-06 0.00012 22.7 5.9 1 23 165 187 165 187 0.99
5 9 5e-05 0.005 17.5 1.0 1 21 193 213 193 214 0.95
6 9 0.041 4 8.4 0.3 2 19 445 462 444 464 0.91
7 9 4.6e-06 0.00046 20.8 1.4 1 23 820 842 820 842 0.95
8 9 0.00012 0.012 16.4 9.4 1 23 848 870 848 870 0.98
9 9 0.037 3.6 8.5 7.0 1 21 876 896 876 897 0.96

Sequence Information

Coding Sequence
ATGGTGGCGCGAAGTGAGAGCATGTTTGGGTGCTACGATAGCTACTCTTATAGACTTTGGAGTCTAGCCAATGTGTGGAACACCTGTCAATTTCCATCCCTAACTAATGGGGTAACGAAAGAAGGGGACGAGGCCAGTTCTGGTTctgaatattttatcaaatgtcCACAATGCCAGAAGGGTTGCCAAACCTTTCAGTCTTTAAAAGAACACATGGAATCTTCACACCCTGATTTGTGTTCAGAAAATGGTACGAATTTGCCAACATCCAGTGCAGTTTCTCCTACACCGAGCCTGGTTGGTCCTGGAGGTCCTTTCGGCTGCACACAGTGTACTGCATCATTCGCTACGAAAGATCAACTCGAAAAGCACGAACTCTTGCATTCGCCTAATGCTCAAGTGTCATGCAAGATTTGCAATAAAACTTTCGCGAATGTCTATCGTTTACAAAGACATATGATCAGCCACGATGAAAGTGCCGTTTTGCGAAAATTTAAATGCACAGAATGCGACAAAGCATTCAAATTTAAGCATCACTTAAAGgaaCATATTAGAATACACAGTGGTGAAAAACCGTTtgaatgtggaaattgtggtAAAAGATTCTCGCATTCTGGATCATATTCTAGCCATATGACATCGAAGAAGTGTCTggttatgaatttaaaattgggCCGCACACGCGCGCCGAATTCTAACGCACTTATTGAGAAGAATGCATCGCAGAATGCAAGAGGAAAACGTTCACatacaaattcattaaataataacataacGACCACCAATCATAATGCGTATTTACCGATTTTGCCAAAATATACCGAAGCTGCTGCTGCCGCCGCTTTTCTTCAAAATACATTAGCTTCCAACCCTGCCATGCATCCATTCTATATGACACCGCCCGGAATGCTAAATGCAAATGGTCATCCTATTACTCCATATTCAATACCATCCTTAGGGCACATACTTGAACAATTGCAAAGTGCATCTACGCCACATAAACCGCAACTTAGTGAGCAGCCAGAAAGTTCATCActtgaagaaattaaaagtGAAGTAAAGCAGGACGCAGAAAATGTGTACAAATCTAATTCATCGAGTTGTGGAGATTTAGTGATGGATGAAGAAGCAGAAACTAAATCTGAATTAACAGCTAAAAACAACACGGAAGCGAATGGTGCACATAATGGAGATCTTGAAGCAGTTAAACGTATTTTGGAAACAGTTAATGCTACCGtaactaaacaatttcttcAAGCGAACATGCAAAAATATTCTGATAATTCAAGCGACTGTCAAAGCATCCGATCTGCACATTCCCCATTAGAAATCTCTTGTTCTATTTGCAAAAAGATATTTAACGCTCAATCGGCTCTGGATGAACATGAGTGCGATGTTAAAGATGTTAGAAGTGAAGGCCTTGCCGCAAAATTAGAAGATGCTGTTACACCAAAGATTGAGAATGGAACATCTAGTGGAAATGAGGATGATGTAGACTTTGATAAAAGTCATGACAAAAATGATGATTATGAGATGGATAGTGAATCTGTAACAACAACCGATCAACTGACGGAAGATGGAAGAAAAGTCCGTGTACGTTCACTGATTTCCGAtgaacaattgaaaatattgaaagacAATTACGCTCTAAATCCTCGTCCAAAGCGTGAAGAATTGTCGAAAATTGCTGAACAAATTGGTTTTCCAGTACGTGTCGTACAAGTTTGGTTTCAAAATACAAGAGCAAGAGATAGACGAGAAGGTAGACTTATTCAAGTACCTTACAGTGCGTCTCCTATGATTCCAAGGTTTTCTTCTCAAGTGGTGCCTTCAAATCATCAATTCCTAGGGCATAAAGTTTATCCACTTGCGCAGTCACCTCCACAATATGTCTCCGAACAACCATTAGATCTGTCAACAAAAAAGGATCCATCTAGAGAATCTTCTCCAGCAAGTTCACCGCATCGACCCGCATCAATTAATCATCATTCCGATTCAGGAGAAGAAGTTGTAAATTTAAGTCACAAATCGTCTCGCAGTCCGACACCATTTCAACATTTACAATACCAAAACCATTACCAAACCTCAAACTGTTCCTCCGAACCAAGACGCTCACCGTCGCCATTAGATTTCAACAACAGTAGCCGTTTAGCTCAAATCTTAGCCCAACCCGCccacaaatttgcattatcTGGTATGGGGCTGGTTCCTATGGAAAGATTGATGCAATTTGGTCCACCAGACTTACCGAGTCTAactcaattaattaacaatcgaATCTCAAGCATTAGTCCGAATTCAGAAAAACGACCATGGACTGACAATGGTGATCTCTCTGTTGATTTACAAGACGATGATTTAAATCATCAAAATAAGCGCAACAAAGTTTCTCAACTTGTTATGAAAAGTCTTGGCAGCCCAATGCTTGGTAATCAAGAAGTTGAAGTTGAAGGACAATTCACATGCGATCAATGTGATAAAGCATTCTCCAAACAAAGTTCTCTTGCACGTCACAAGTACGAGCATTCAGGTCAACGTCCACACAAATGTGATGAATGTCCCAAAGCCTTCAAGCATAAGCACCATCTAACTGAGCACAAACGTCTTCATAGTGGCGAAAAACCTTTTCAATGTTGTAAGTGTTTGAAAAGGTTCTCACATTCGGGTTCTTATAGCCAACATATGAATCATCGTTATTCATATTGTAAGCCATACAGAgagtaa
Protein Sequence
MVARSESMFGCYDSYSYRLWSLANVWNTCQFPSLTNGVTKEGDEASSGSEYFIKCPQCQKGCQTFQSLKEHMESSHPDLCSENGTNLPTSSAVSPTPSLVGPGGPFGCTQCTASFATKDQLEKHELLHSPNAQVSCKICNKTFANVYRLQRHMISHDESAVLRKFKCTECDKAFKFKHHLKEHIRIHSGEKPFECGNCGKRFSHSGSYSSHMTSKKCLVMNLKLGRTRAPNSNALIEKNASQNARGKRSHTNSLNNNITTTNHNAYLPILPKYTEAAAAAAFLQNTLASNPAMHPFYMTPPGMLNANGHPITPYSIPSLGHILEQLQSASTPHKPQLSEQPESSSLEEIKSEVKQDAENVYKSNSSSCGDLVMDEEAETKSELTAKNNTEANGAHNGDLEAVKRILETVNATVTKQFLQANMQKYSDNSSDCQSIRSAHSPLEISCSICKKIFNAQSALDEHECDVKDVRSEGLAAKLEDAVTPKIENGTSSGNEDDVDFDKSHDKNDDYEMDSESVTTTDQLTEDGRKVRVRSLISDEQLKILKDNYALNPRPKREELSKIAEQIGFPVRVVQVWFQNTRARDRREGRLIQVPYSASPMIPRFSSQVVPSNHQFLGHKVYPLAQSPPQYVSEQPLDLSTKKDPSRESSPASSPHRPASINHHSDSGEEVVNLSHKSSRSPTPFQHLQYQNHYQTSNCSSEPRRSPSPLDFNNSSRLAQILAQPAHKFALSGMGLVPMERLMQFGPPDLPSLTQLINNRISSISPNSEKRPWTDNGDLSVDLQDDDLNHQNKRNKVSQLVMKSLGSPMLGNQEVEVEGQFTCDQCDKAFSKQSSLARHKYEHSGQRPHKCDECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00429770;
90% Identity
iTF_00429770;
80% Identity
iTF_00429770;