Basic Information

Insect: Deinopsis erosa
Gene Symbol: RREB1
Assembly: GCA_027574845.2
Location: JAODFZ020006534.1:338-4963[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00079 0.078 13.8 0.9 1 23 59 81 59 81 0.96

2 16 4.2e-05 0.0041 17.8 0.3 1 23 94 116 94 116 0.98

3 16 4.4e-06 0.00043 20.9 4.3 1 23 122 144 122 144 0.99

4 16 0.11 11 7.1 0.2 1 23 207 231 207 231 0.84

5 16 0.00085 0.084 13.7 3.2 2 23 237 259 237 259 0.97

6 16 1.5 1.5e+02 3.4 1.2 1 19 307 325 307 327 0.85

7 16 0.0089 0.88 10.5 0.2 1 23 458 480 458 480 0.98

8 16 6.3e-06 0.00062 20.4 0.8 1 23 489 511 489 511 0.99

9 16 0.00064 0.063 14.1 3.1 1 23 517 540 517 540 0.97

10 16 0.00055 0.054 14.3 2.8 1 23 912 935 912 935 0.96

11 16 0.00038 0.038 14.8 0.4 2 23 1163 1184 1162 1184 0.97

12 16 0.097 9.5 7.2 6.3 1 23 1190 1213 1190 1213 0.97

13 16 0.039 3.9 8.5 4.3 1 20 1240 1260 1240 1264 0.95

14 16 4.2 4.2e+02 2.0 3.7 1 23 1316 1339 1316 1339 0.84

15 16 0.013 1.3 10.0 0.4 3 23 1386 1406 1384 1406 0.93

16 16 0.0058 0.57 11.1 5.9 1 23 1412 1434 1412 1434 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00079	0.078	13.8	0.9	1	23	59	81	59	81	0.96
2	16	4.2e-05	0.0041	17.8	0.3	1	23	94	116	94	116	0.98
3	16	4.4e-06	0.00043	20.9	4.3	1	23	122	144	122	144	0.99
4	16	0.11	11	7.1	0.2	1	23	207	231	207	231	0.84
5	16	0.00085	0.084	13.7	3.2	2	23	237	259	237	259	0.97
6	16	1.5	1.5e+02	3.4	1.2	1	19	307	325	307	327	0.85
7	16	0.0089	0.88	10.5	0.2	1	23	458	480	458	480	0.98
8	16	6.3e-06	0.00062	20.4	0.8	1	23	489	511	489	511	0.99
9	16	0.00064	0.063	14.1	3.1	1	23	517	540	517	540	0.97
10	16	0.00055	0.054	14.3	2.8	1	23	912	935	912	935	0.96
11	16	0.00038	0.038	14.8	0.4	2	23	1163	1184	1162	1184	0.97
12	16	0.097	9.5	7.2	6.3	1	23	1190	1213	1190	1213	0.97
13	16	0.039	3.9	8.5	4.3	1	20	1240	1260	1240	1264	0.95
14	16	4.2	4.2e+02	2.0	3.7	1	23	1316	1339	1316	1339	0.84
15	16	0.013	1.3	10.0	0.4	3	23	1386	1406	1384	1406	0.93
16	16	0.0058	0.57	11.1	5.9	1	23	1412	1434	1412	1434	0.98

Sequence Information

Coding Sequence: ATGGATGTGACAAGCAACGAACCACCAACAGCAACCAAAGAAATAAACCAAAGTGATTCAGGCATCTTTTCCGCAACGGGAAACTCCTCATTACCGGACGTCTCAACACGAACGACACATTCCTCCGAAAATGAAACGGACAATCGGTCCGAATGCAGTACGCCCGATCGAAAATTCCTCTGTCCCATATGCGAGATGATGTTGACGTCGCAACATGAATTCACGTTGCATATACGTTCGCACAACAATGACAGCGACGTGCAGGATCCGGATAAGGGGTACACTTGTCGGATATGCAACAAAGTGCTGAGTTCGAGTTCCAGTTTAGATAGACATGTCCTAGTGCATAGCGGGGAGCGGCCGTTTACGTGCAAGTATTGTGGCGATACGTTTACAACGAATGGGAATATGCATCGACATATGCGCACGCATAAAACGGAGAACTATGAGTCGGATGGTAGTGTGGATAGTAATGCGAGTTGCGGTTCGAAGagtattgaatttaataataataaaattgataaattggaGGGGAAGCGGAAGTGCGATGCTGCTGATGATGGCTATAATAAGGTGTCGAAGAAGAGACCGCATTTGAGCAGCGACGATGTGGAGAACTACAAATGCCCGATCTGTGATAGAGACGATTTTATAAGTAGGAAAAGTCTGGAAACGCATCTGGAGGACAATCATCCCGATTATCCAGCAAAGTGCCATCAATGCCATCGAATCTTTGAGAATAATAAAGCGCTGAATGTGCATCGCGCCACAGCGCACTTGGATGAGAATGGGAAGAGTAAAAATTCAGTGGTTGGCTTCAAGGATTTAGCGATCGTTGATTTTAGTAGCGAGAAGTTTCCGTATATTGCGCGCGCGGAATGCGAGAAGAATTTGCATAAGCCGCCGCCCGGTTTGAAGTTTCAATGTGGGAAATGTACGCGCGCCTTTCCCTGCGAAAAATCATTAGAGTTGCATAGCAACGGATGCGGCACTTTGGATTTGACGATGATGCGAAACGAACAGCATCCAATGGACTTCGGTAAGACGAATGAGAGTGAAGTGCGCCGAAGCGAGTTTTTCTCGCGTCTAGATTTGCAGGATAATTCGCCGGAAAAGTCTAAGTCGAAATACGTTGAGGGGCCGAGAAAGTTGCAGCAACGTATCTTGGAGACGATGAAATCAATCGACAGCAGTAAAGACCTTGCTGATATCCAATCGATTCTCTCGATGACCACGAACGGTAGCTTGCTGCAGCATTTACAGAATAAGACGAGCGAATTGACGCAGATCAATGAGAGCGAGCGGACGGAGGAAGAGGAGCAGCAGGATTCGTTTGCGCAGGAGTTTCGTAAAATGAAGTTGCGTGGCGAGTTTCCGTGTCGCCTCTGCACCGCCGTTTTCCCGAATTTGCGTGCGCTGAAAGGGCACAATCGGACGCATTTGAATGGCGCGAATAATGGCACCTATCGTTGCAACATGTGCCCGCACTCATCGATTGACAAGGCAGCGCTCATTCGTCATATGCGAACGCATAACGGTGATCGGCCGTATGAATGCTCACTATGCAATTACGCTTTCACCACTAAGGCCAATTGTGAAAGGCACCTTCGTAATCGACACGCGAAGACCACACGTGAAGAAGTCAAGAAAGCGATCATATACCATCCGTCAGAGGATCCAACGAACGAAGATATTGCCAAGCAAATAGAAActaagaaattaaatacaagCACAAATTCAATGGACAGTAACGATATGACGCCGGAGAAGATTCGCAGTTCGACGCCGAAAAATATACCCGCCTTTCCCGACCTACCAAAACTCTCCACATCTGACATTCTTCCAAACGTGAAAGAATTTTCCGCTCTATTGCCGCCAAAGTCGTTGCAAACGTTTTCTAATCTGGGCGATATCATACACACTGATAATTTGAAGGCGATGAAAGAGCAACGCGTTAGCGAACCACTTTCACCCTTCCTTCCACCCCATATGCAATTCACCCCTAAATACAACAACACTTCAACGCCACAGAAAGCGAATCCAATCATTCAGGTGAAAGATCTGCAAAAGCTTAAACAAATTCCGGAACATGATGCTTCggatgaggaggaggaggaggatgaGGATGTGGTCGATGAACCAATGAATTTGGTGTTGGATTTGAGCAAGAAGAAGAATGATAGTGAGGATGAGATTCCTGAGAATTTATCGAAAAAGCATGAAGAGAATCCGTTGCATATGAGCGAAATTCTTGCTCAACAATTACTGAAATCGACGCCCAAAATTGATCCGGCCACTTTATATGCCACACACTTGGCTTTGTATCAAAATAGTTTTCCTAATTGGCCTGCGTTTTCTATCAACCCATTGTTATTCCCATCGATGCAACGACCGTTAATGCAAGATCCGCAAGATATGAAAGAACGCTTGCAGCGTTTATGCGGCGGTGGAATGATTGAGAATATTCATGATCGATTGAAAGGCTTTTATGCGCCGACCACATTCCCTGGCATGAAAATTCCTGATGGCAAGAAGGATGGCATGCAAATGAAGAACGATATGAAACCGCTTTCGTTGAACATCGAATCGAATTACAGTAACGATAAAATGAAATCTCCCATTCTACAAACAAAGCCCGATTTGCTGCAATCGCCGAATTCGGTGAAAATGGTCATCAAGAATGGTGTTCTGATGCCGAAACAGAAGCAGCGACGTTATCGCACCGAACGACCTTTTTCCTGTGAACATTGTTCGGCGAGATTTACGTTGCGCTCGAATATGGAGCGTCATATAAAGCAACAGCATCCGCAGTACTGGTCGCAACGACAACGCTCCTCAGTTGGCACGCCTGGCCGCAAACCACAACTacccaacaacaacaataatgcAATGAAGAACGGCGTATGCGAGCTGCAAATACCAAACTATGAAGTGTCCAAAATGCACGGCTACGAGGACACTAAAGACAATACCATTTCGGATAAGTTGAAGTACGCGATACTAGCGCAACATTTACGCGCCGCACAAGAATCCCAGCATGGTGATAAGAAGGAGGAGGACGAGGATTGCGCGTTGATTATCGATGAGAATGAGGAGCATCCGAAAAGCGAATACCAATCGTTTGAGAGCTCACACAAGTCGCGTATTTTGGAGGAGAAATTAAAGGAGTTGCGAAGCAAACAATTGCTGAATGAGAAATTGCTGAATGAGGCGTCGAAATCGAAGAATGAGGAAGGTCAGGATTTGGTGCCGGTTTCCAGGCTGCTCGATAACGCTTCCCAGCAACCCTTCAAAGATTACTTCCGACGCGAAATTGAGGAGCATGAGGCGGAAGGTATCAGCGAGGAGGACGAAGAAGGTTTGGTGGCTAGTGGCAGCACCAGCGAAGGCAATTCCGGAACAGATGAAAATCGttctgAAAGTGATATCATCAATAATGCACCAACGAAGAAGAAGTCCGCTTATTCCTTGGCGCCGAATCGAGTGAGCTGTCCATATTGCAGTCGGAAATTTCCATGGACTTCATCGCTGCGACGTCACATCCTCACACACACCGGCCAGAAGCCATTCAAATGTAGCCATTGCCCGCTCCTCTTCACCACCAAATCGAATTGCGATCGTCATTTATTACGCAAACACGGCAATTCAGCGACCACCATCTCCAACGAGAACATCAACAATAACAATTTCATGATGCGAAATGTGCCGGAGCGGCCGTTCAAATGCTCAAATTGCCCGAGCAGCACATTCTCCACCTATTCCAACCTGAAAAAGCACATGATCTGTAAGCATGGCGCGCAGGACGATCGACAAGGCTACGAGGCGGGCAGTTCGGAGGACGAGAAGAACAACAGCGACCAGAAGAGCGACTGGGAAGCGCAAATATCGCATTCAAAGATTGCGGTGGTGAATAACGAGACGCCCGTGCCCAATTCGGATCTACCCTTCAAATGTCACCTATGCGATAACTCGTTCGGCGAACGACAAGACTGCTTGGATCACATCAAAGACAAGCACACATCCGAATACGATCTGCTGATGGCGAAGAATGCGTTGGATGCGAACGCCTCAACACCGGACGAAGGAGGAAATCACGACGAGGAGGAGAACGAGATTCGTGGCAAATTCCCCGACTACAGCAATCGTAAAGTGATTTGTGCATTCTGCATGCGACGTTTCTGGTCAGCTGAAGATCTACGCCGGCATATGCGTACACATACAGGGGAACGACCATTCAGCTGCGACATCTGCCGACGTCGATTCACCTTAAAACACAGCATGTTGCGTCATCGTAAAAAGCACAATCTGACAGCATTCGAGAATGAAGCGGCAATGCAAAGCGACGAGGACGCTAATGTGGGAAGTCTAGAGAagcttaaaataaacaataatcatTTAAGAAGTAAAATAGCGGAGAGGACTGATGAGTCGGATGGTAATGAGGGCGGTAGCGATTTAATAAGCAATCTATTAGGTATTAGGGATCGTTCAATCATTGAACAAGTATTAACTGCTAGTGCAGACGATGCTGCAAAACTATTAGGTGTCGGTGGAGGAcaagaataa
Protein Sequence: MDVTSNEPPTATKEINQSDSGIFSATGNSSLPDVSTRTTHSSENETDNRSECSTPDRKFLCPICEMMLTSQHEFTLHIRSHNNDSDVQDPDKGYTCRICNKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHKTENYESDGSVDSNASCGSKSIEFNNNKIDKLEGKRKCDAADDGYNKVSKKRPHLSSDDVENYKCPICDRDDFISRKSLETHLEDNHPDYPAKCHQCHRIFENNKALNVHRATAHLDENGKSKNSVVGFKDLAIVDFSSEKFPYIARAECEKNLHKPPPGLKFQCGKCTRAFPCEKSLELHSNGCGTLDLTMMRNEQHPMDFGKTNESEVRRSEFFSRLDLQDNSPEKSKSKYVEGPRKLQQRILETMKSIDSSKDLADIQSILSMTTNGSLLQHLQNKTSELTQINESERTEEEEQQDSFAQEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRTHLNGANNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNEDIAKQIETKKLNTSTNSMDSNDMTPEKIRSSTPKNIPAFPDLPKLSTSDILPNVKEFSALLPPKSLQTFSNLGDIIHTDNLKAMKEQRVSEPLSPFLPPHMQFTPKYNNTSTPQKANPIIQVKDLQKLKQIPEHDASDEEEEEDEDVVDEPMNLVLDLSKKKNDSEDEIPENLSKKHEENPLHMSEILAQQLLKSTPKIDPATLYATHLALYQNSFPNWPAFSINPLLFPSMQRPLMQDPQDMKERLQRLCGGGMIENIHDRLKGFYAPTTFPGMKIPDGKKDGMQMKNDMKPLSLNIESNYSNDKMKSPILQTKPDLLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSSVGTPGRKPQLPNNNNNAMKNGVCELQIPNYEVSKMHGYEDTKDNTISDKLKYAILAQHLRAAQESQHGDKKEEDEDCALIIDENEEHPKSEYQSFESSHKSRILEEKLKELRSKQLLNEKLLNEASKSKNEEGQDLVPVSRLLDNASQQPFKDYFRREIEEHEAEGISEEDEEGLVASGSTSEGNSGTDENRSESDIINNAPTKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNENINNNNFMMRNVPERPFKCSNCPSSTFSTYSNLKKHMICKHGAQDDRQGYEAGSSEDEKNNSDQKSDWEAQISHSKIAVVNNETPVPNSDLPFKCHLCDNSFGERQDCLDHIKDKHTSEYDLLMAKNALDANASTPDEGGNHDEEENEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNLTAFENEAAMQSDEDANVGSLEKLKINNNHLRSKIAERTDESDGNEGGSDLISNLLGIRDRSIIEQVLTASADDAAKLLGVGGGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -