Basic Information

Insect: Deinopsis erosa
Gene Symbol: -
Assembly: GCA_027574845.2
Location: JAODFZ020017252.1:4629-7210[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.1 10 7.1 4.9 1 20 156 175 156 179 0.84

2 10 0.017 1.7 9.6 0.1 1 23 185 214 185 214 0.97

3 10 3.1e-08 3e-06 27.7 0.4 1 23 220 242 220 242 0.98

4 10 2e-07 2e-05 25.1 4.8 1 23 248 270 248 270 0.99

5 10 0.0018 0.18 12.6 0.3 1 23 276 298 276 298 0.92

6 10 2.5e-06 0.00024 21.7 2.0 1 23 304 326 304 326 0.99

7 10 0.0013 0.13 13.1 0.7 1 23 481 503 481 503 0.98

8 10 4.1e-05 0.004 17.8 0.3 1 23 515 537 515 537 0.97

9 10 3.2e-07 3.1e-05 24.5 2.6 1 23 543 565 543 565 0.99

10 10 8e-05 0.0079 16.9 3.9 1 23 573 596 573 597 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.1	10	7.1	4.9	1	20	156	175	156	179	0.84
2	10	0.017	1.7	9.6	0.1	1	23	185	214	185	214	0.97
3	10	3.1e-08	3e-06	27.7	0.4	1	23	220	242	220	242	0.98
4	10	2e-07	2e-05	25.1	4.8	1	23	248	270	248	270	0.99
5	10	0.0018	0.18	12.6	0.3	1	23	276	298	276	298	0.92
6	10	2.5e-06	0.00024	21.7	2.0	1	23	304	326	304	326	0.99
7	10	0.0013	0.13	13.1	0.7	1	23	481	503	481	503	0.98
8	10	4.1e-05	0.004	17.8	0.3	1	23	515	537	515	537	0.97
9	10	3.2e-07	3.1e-05	24.5	2.6	1	23	543	565	543	565	0.99
10	10	8e-05	0.0079	16.9	3.9	1	23	573	596	573	597	0.96

Sequence Information

Coding Sequence: atgAATTCGAAGGAAGATAGTGTCAGTTATAGTTATACAACGATTTGTCGACTTTGCATGCAACGTGATGGCTTTATGTTGGGCATATTCAATCACATTCAGGGCAAAGAGAAAagtatttataagaaaattatggATTGCACCGCTTTGGAGatTTCGTTCGGTGATGGTTTACCGAACTCGATATGTCATCGATGTCTATACAAAATCGAATTCTGCTTGGAATTTCGTCAGCAATGCTGCGTCTCAGATGCCACGCTACGTCAAATTAATGGtatatcaaaacaaaacaattacgAGTTgaataatcatcatcatcatcatcatattacAAAAACGCCGCAACCTCAGCCACCACAACAGCAGGACAGCAGCAGCAATGTGGTGATGGTGGTCGATCCGAACGTGTTGGATTACGAATCGGATTACGATTCGGAGCATTCCGATATCATCGATAAGAATGTGTTTATGTGCAAGTATTGCGATCAGGCGTTCACCGATAAGGCGGAATGCCATGCGCACGAAACGCACAATCACGATCCGGCGATACCGTACGTATGCAACCTGTGCGGCGACGGTGGTGGTACCACCACAAATTTCACCGATCGCATTCAATTCTCGGCGCATCTGAAAACGGTGCACGCTAATGATAAGCCGTATCAGTGTCCGCAATGCGATAAAGCGTTCGCACGCCGCTCCGATCTACGTAAGCACACCATTGTGCATACGGGCATCAAACCCTACACCTGTCACATATGCTTCAAATCGTTTTCGCGTAACACGAACTTGTCGAAGCATTTGCGTATTCATAAGAGCCCGAAGCCGTTCGTGTGCACCAGCTGCCCGAAAACCTTTCTCAGCAAGGTGGATTTGACGCGACATGCCGTGCTGCATACGGGCGTTAAGCCCTTCAAGTGCAATTACTGCCCGTTGGGCTTTGAGCGCAAAGATAAACTGTTGAGACATCAGAAACGTCACTTCCCCACGAGCGGTGATTGTATCAACGATAAAACGAACGAATTGCGAAGGATGCGCGAACATTTAGGCTTCCTGAACAACGATACAACGGTTATGCAACCCACAatacagcagcagcagcaacaagaAGAAGACGCGCCGCCGTCTCAGAAGAGTGACGAAAGCGAAAATTTAGTGGTGACAGTCGATCCGTTTCAGAATATAGAAGAGATTAATACTGAACCTGATCTACCGCCATCTATATGTCCGGAGGtgaaggaggaggaggaggacggCGTTATGGGGGACGATAGTGAGGAGAGAAGAAGGGACGATGCGATAAATGATAGCGCAATGCTAATGGAAGTGCCTGatgTTCCTTCTCTACTACCAGAAACCACAATCACCCCCATCATCCCTTCTTCATCACCTCTAATCACCACACCACAGCCGTTATTACAACAACATGACGCTGCAGCGACCTACGAATGTCAAATGTGTCAGAGACAGTTTGCCGCCTTCGATCAGCTCCATCTGCACATGGCCGTGCACACTACCACCACCACTACTAAAAGCAATCGGCCCTTTGCATGCATGCAATGCCCCAAGGCGTTTATGCGAAAACGCGAATTGGATCGACACATTGCGACGCATACGGGGCAGAAGCCGTTCAAGTGCAGCTACTGCGAGAAGCGGTTCGGCCGCAAGGACAAACTGATTAGGCATCAGCGTATTCATGACGCGAATAATAGGGTGCTGCATAATTGTGAGGTGTGCGGGGCGCAGTTTCAGCGGAAAGATGGACTTGCGCATCATATGCGCACCACACACCACATCACCAATAATGAGCAGCAGGGGGAGCAGGAAGAGCAGGAGCAGGCGCAGGAGCGGGAGCAAGAAAAGGTCGTTGATTAA
Protein Sequence: MNSKEDSVSYSYTTICRLCMQRDGFMLGIFNHIQGKEKSIYKKIMDCTALEISFGDGLPNSICHRCLYKIEFCLEFRQQCCVSDATLRQINGISKQNNYELNNHHHHHHITKTPQPQPPQQQDSSSNVVMVVDPNVLDYESDYDSEHSDIIDKNVFMCKYCDQAFTDKAECHAHETHNHDPAIPYVCNLCGDGGGTTTNFTDRIQFSAHLKTVHANDKPYQCPQCDKAFARRSDLRKHTIVHTGIKPYTCHICFKSFSRNTNLSKHLRIHKSPKPFVCTSCPKTFLSKVDLTRHAVLHTGVKPFKCNYCPLGFERKDKLLRHQKRHFPTSGDCINDKTNELRRMREHLGFLNNDTTVMQPTIQQQQQQEEDAPPSQKSDESENLVVTVDPFQNIEEINTEPDLPPSICPEVKEEEEDGVMGDDSEERRRDDAINDSAMLMEVPDVPSLLPETTITPIIPSSSPLITTPQPLLQQHDAAATYECQMCQRQFAAFDQLHLHMAVHTTTTTTKSNRPFACMQCPKAFMRKRELDRHIATHTGQKPFKCSYCEKRFGRKDKLIRHQRIHDANNRVLHNCEVCGAQFQRKDGLAHHMRTTHHITNNEQQGEQEEQEQAQEREQEKVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -