Basic Information

Insect: Deinopsis erosa
Gene Symbol: pzf-1
Assembly: GCA_027574845.2
Location: JAODFZ020003036.1:1053-3304[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0048 0.48 11.3 1.7 1 23 335 357 335 357 0.95

2 11 0.00095 0.094 13.5 1.1 2 23 374 396 373 396 0.94

3 11 0.00013 0.013 16.2 1.8 1 23 403 425 403 425 0.97

4 11 0.0056 0.56 11.1 1.4 2 23 459 481 458 481 0.95

5 11 6.4e-06 0.00064 20.4 3.1 1 23 515 537 515 537 0.98

6 11 7.2e-06 0.00071 20.2 0.7 1 23 543 565 543 565 0.98

7 11 2e-05 0.002 18.8 0.1 1 23 572 594 572 594 0.97

8 11 1.6e-06 0.00016 22.2 0.3 1 23 600 622 600 622 0.97

9 11 3.5e-05 0.0035 18.0 2.5 1 23 628 651 628 651 0.97

10 11 3.4e-06 0.00034 21.2 2.3 2 23 658 679 657 679 0.96

11 11 0.0011 0.11 13.3 0.1 1 23 685 708 685 708 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0048	0.48	11.3	1.7	1	23	335	357	335	357	0.95
2	11	0.00095	0.094	13.5	1.1	2	23	374	396	373	396	0.94
3	11	0.00013	0.013	16.2	1.8	1	23	403	425	403	425	0.97
4	11	0.0056	0.56	11.1	1.4	2	23	459	481	458	481	0.95
5	11	6.4e-06	0.00064	20.4	3.1	1	23	515	537	515	537	0.98
6	11	7.2e-06	0.00071	20.2	0.7	1	23	543	565	543	565	0.98
7	11	2e-05	0.002	18.8	0.1	1	23	572	594	572	594	0.97
8	11	1.6e-06	0.00016	22.2	0.3	1	23	600	622	600	622	0.97
9	11	3.5e-05	0.0035	18.0	2.5	1	23	628	651	628	651	0.97
10	11	3.4e-06	0.00034	21.2	2.3	2	23	658	679	657	679	0.96
11	11	0.0011	0.11	13.3	0.1	1	23	685	708	685	708	0.95

Sequence Information

Coding Sequence: ATGGATATTGCTTATAAATCAACACATCGATGTCGTTGTTGTTTAACGAACAACACATTCACTTCAATTTACGATCCAATGACGATAAACGGTAAAATAATCAACTATGCtgatattataaacaaaatcacaacAATCGAGATTAATGAGTTGGACGAGAAGCCGCATTACATATGCGAAAAATGCTGCGAAATAGCGAGGAACGCTTACAAATTGCGTATAATCTGCGAACAATCCGACAACATTCTACAAAACGAACGAATTGGACGAACGACGAACGAGAATGTAATTGAAATCGATGAGGATTTAATGGAAATCGAACAATTAATCACCGACACTGAGATTAAACacgaattgaatgaatttggCGAAGAAAATGTGGAATTAAACAATTCTAACCTCAAAAATATACTTTGTGTTAGTCAGGCAACCAACATTACACCAAATGGAGGTGTATacgaaaattcaaatattgaaGGAGGCCATGCAAACAAGGGATTTGTTGAAGATGAAAATGTGGAAGTAAacaaatctaattgtaagctaaaAAATAAGTTCAGTGTTAGGCAGGCAAGCAATAATACACAAAATGGGTacgaaaatcaaatttcaagtATTGAAGGTGCTAACAATTCAGAAAGCAATGAATTTGTGGATGAAAATGTGGAAGTCAACAAATTTGTGGATAAAAATTTGGAAATCAACAAATCTAACCTCAAAAATACATTCTGTGTTCGGCAGGCAAGCAACAATACACAAAATGGGTACGAAAATCAAATTCTAAATATTGTTGGTGTTAACAATTCAGAAAACAATGAATTTGTGGATGAAAATGTGGAATTAAACCAATCTAACCTAAAAAGTGTACTTTGTGTTAGTCAGGCAACTAACAATACACAAAATGTAGGTTTATACGAAACTTCTGAAGACAGCCATGCTACTAACAATATAGAAAACAATGAAGCAATGGATGTGCAAATCGAAAATGACGTTATAATCGAATATAAATGTGAGAAATGTAACTATACATGTGATACGGAGCGTAAGTTGTTGGCGCATGAAGTGGTGCATCGTGTGGGCACTAATAAAGTGAGTAATAAAGTGAAAGAAGCGACGACGAAATGTCGTTTATGTGAATTTGTAGGAACGACACGCTCTAACCTACAAAAGCATATGGAGGAGAAACACTTTGAGGATTCCAAGCTATTCGATTGCGTCCAATGCAATAAGACGTTCCTAAATCAAGCGCAATTGAACAGGCATAAAAGGTCACATGATGCGATAGTGAagaattgtttgttttgcGGATTTGAGGGTGATTGCAACGCCTTAGTGCAGCATACCATCGAACGGCATCCGAATAGGATGGATATGAAGTGCTGGCGATGTGATATGAAGTTCTATACGATAAATCGCTTGCGGAAGCATATGAAGGATGTGCATGAGATTCCATCGAATGGATGCTGGTGTTGTGAGTATGTGGCCGACAATAAATTGGCGCTGACGAAGCACGTGAATGAGACGCACACGGATTTGAAGGCGTTCGAATGCACGAAATGTGCGAAACGTTTCTTTGATCGTTCATCGCTCAGGAAGCACCTGCAAACGCACAACGTGCGTAAGGATTATGTGTGCGAGGTGTGCGGACGCGCCTTTCACGTGGAGGACAATTTGCAGAAGCATCGTAAGTTGCATACGCTCACCGACAATCAGTTTCAGTGCGAGGTGTGCGGTGTTGCGTTTAAGACGCGAGCCTCATTGCGGATGCACGGCCTCGTACATTCCAAGCGAAAGGATTTCGTCTGTGATGTGTGTGGGAGGAAGTTTGCGCGTAACGGGCAATTGATGCAGCATCAGTATATACATGCGAAGGAGAAGACGCATCAGTGCACCGTTTGCGAGAAACGTTTCGCGTCGAAGAAGTACCTGATGATACATGTGAAGATGACGCATATTGGGGAGAGGAATTGCGAGTGCACGATATGCGGCAGGCGATTCATGCGGAATGCGATGCTGAAGCGACATCTGTTGACGCATAcgaatgattttaaatatacGTGCGATGTGTGCGAGGAGGGTTTTCGCTCCGTCGCTAAATTGAAGGAGCATGTGAATGAGGAGCATGGCGAGAATGAGACTAGTagtgaggaggaggaggaggaggacgaGGAAGATGAAGATTTTGACGTATAA
Protein Sequence: MDIAYKSTHRCRCCLTNNTFTSIYDPMTINGKIINYADIINKITTIEINELDEKPHYICEKCCEIARNAYKLRIICEQSDNILQNERIGRTTNENVIEIDEDLMEIEQLITDTEIKHELNEFGEENVELNNSNLKNILCVSQATNITPNGGVYENSNIEGGHANKGFVEDENVEVNKSNCKLKNKFSVRQASNNTQNGYENQISSIEGANNSESNEFVDENVEVNKFVDKNLEINKSNLKNTFCVRQASNNTQNGYENQILNIVGVNNSENNEFVDENVELNQSNLKSVLCVSQATNNTQNVGLYETSEDSHATNNIENNEAMDVQIENDVIIEYKCEKCNYTCDTERKLLAHEVVHRVGTNKVSNKVKEATTKCRLCEFVGTTRSNLQKHMEEKHFEDSKLFDCVQCNKTFLNQAQLNRHKRSHDAIVKNCLFCGFEGDCNALVQHTIERHPNRMDMKCWRCDMKFYTINRLRKHMKDVHEIPSNGCWCCEYVADNKLALTKHVNETHTDLKAFECTKCAKRFFDRSSLRKHLQTHNVRKDYVCEVCGRAFHVEDNLQKHRKLHTLTDNQFQCEVCGVAFKTRASLRMHGLVHSKRKDFVCDVCGRKFARNGQLMQHQYIHAKEKTHQCTVCEKRFASKKYLMIHVKMTHIGERNCECTICGRRFMRNAMLKRHLLTHTNDFKYTCDVCEEGFRSVAKLKEHVNEEHGENETSSEEEEEEDEEDEDFDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -