Basic Information

Insect: Deinopsis erosa
Gene Symbol: -
Assembly: GCA_027574845.2
Location: JAODFZ020024188.1:1459-4153[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.034 3.4 8.6 0.5 2 20 117 135 116 140 0.89

2 14 0.00027 0.027 15.2 0.1 1 20 143 162 143 163 0.96

3 14 0.0021 0.21 12.4 5.4 1 23 171 193 171 193 0.97

4 14 2.4e-06 0.00023 21.7 0.3 2 23 200 221 199 221 0.98

5 14 0.00051 0.05 14.4 0.3 1 23 291 313 291 313 0.97

6 14 0.0045 0.45 11.4 1.4 2 20 321 339 321 341 0.92

7 14 0.00023 0.023 15.5 5.8 1 19 382 400 382 401 0.97

8 14 6.3e-05 0.0063 17.2 0.3 1 23 409 432 409 432 0.94

9 14 0.00012 0.011 16.4 1.5 1 23 438 460 438 460 0.96

10 14 3.8e-07 3.8e-05 24.2 1.3 1 23 467 489 467 489 0.99

11 14 0.005 0.5 11.3 0.5 3 23 497 517 495 517 0.97

12 14 0.00047 0.046 14.5 0.2 1 23 523 546 523 546 0.94

13 14 1.3 1.3e+02 3.7 1.1 1 23 558 580 558 580 0.92

14 14 6.6e-05 0.0065 17.2 0.2 2 23 671 692 671 692 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.034	3.4	8.6	0.5	2	20	117	135	116	140	0.89
2	14	0.00027	0.027	15.2	0.1	1	20	143	162	143	163	0.96
3	14	0.0021	0.21	12.4	5.4	1	23	171	193	171	193	0.97
4	14	2.4e-06	0.00023	21.7	0.3	2	23	200	221	199	221	0.98
5	14	0.00051	0.05	14.4	0.3	1	23	291	313	291	313	0.97
6	14	0.0045	0.45	11.4	1.4	2	20	321	339	321	341	0.92
7	14	0.00023	0.023	15.5	5.8	1	19	382	400	382	401	0.97
8	14	6.3e-05	0.0063	17.2	0.3	1	23	409	432	409	432	0.94
9	14	0.00012	0.011	16.4	1.5	1	23	438	460	438	460	0.96
10	14	3.8e-07	3.8e-05	24.2	1.3	1	23	467	489	467	489	0.99
11	14	0.005	0.5	11.3	0.5	3	23	497	517	495	517	0.97
12	14	0.00047	0.046	14.5	0.2	1	23	523	546	523	546	0.94
13	14	1.3	1.3e+02	3.7	1.1	1	23	558	580	558	580	0.92
14	14	6.6e-05	0.0065	17.2	0.2	2	23	671	692	671	692	0.97

Sequence Information

Coding Sequence: ATGGATACGCCTGACTTTATTTTACCCGTTACCAATGAGGATCAAACGATTTACACGAATATGACCGAATTTCAGCCAGTGGTGGATGATGAGCACTTTAATGTGTATGGAACGAACGATGTGCAATTGGAGACGCATGACGTCTTAATGCCCACCAACCTACACGCCACCAAACAGCTATTCAATACCACCGACGATTTATTGAACATAAAAATCGAGCCGGGCGATGCAAATGCAACGGACGATGAAAGTATGGCTGTAGAAGCACTACGTCAATTAGGCAACTCAACGTACACGTTGAAATCGGCCCGTATCGAGACGACAACGCCGCACGATCTTCCATTGCTGCCGTGCGACACTTGCGAATTGGAGTTTCGCACCACGGCTGATTTGAATAGTCACGCGGATATTTGTAAGCACAGCCAGTACGTTTGCCCAATTTGCAATCAGCTATTCGAACGCAAACAGGAGCTGAATAATCATTTGGTGTGTCATGCGGTGGATAGGCCACACTCATGTCGTCTGTGCGGCACGTTATTCATACACAAGCATGAATTGGTTCAGCATATGAGCACACATGgtagtaatattaataatcagTGTCAGGTGTGTGGTTTGGAGTTTCAACGGCCTTCCAGTTTAACGAATCACATGAAAATACATAACTATCAGCCGGGCCGAGCGTTGTGCAGCACGAAGATTGAGAATAATAGCGATTTGGCGGATATTTTAGGTGATGTTAATGAGCCAGCTGAAGAAAAAGTCATTTTACCGAGTATAAGTCACATTGCGAGCTTAAGTGGCTTCAATTTATCGTTCAGATCGGATAGTGAGAGTGAATTATCACCGAAAAGCGACTCAAAGCGTCCGTATTCGTGCGTAAAGTGTGCGATAACGTTCTCGCGAGAAACAGCCCTAAAATCGCATCTATTATTGCATAAAGATGTTTTCGATAATAATACATGTGAGCATTGCAATAaagaattcaataatttgcagCTGCTGGATAAGCACAAGGAGCGGTGCTTCAGGAAAAAGCAGAAAGCGATGCAGAGCGAAAGTGAGGTTAGAATTGAAAGTAGCGTCGTCCCCAAGTTAGCCGCTAAACAAGCACCCGATGAGGATGTTATGAAATTGTATAAACATAAATGTCAGGAATGTGGGAAATGTTTTACGACTAATCAGAAGCTGTTTCGGCACAATTGGATACATCGCAAAAAGACGTATTCGTGCGAATTGTGCAGTAAGATGTTTGATCAGCAAAGCGATCTGGATGCGCATCGACTTGCCACACATCAATCCGGCTCACCGTACGTTTGTTTCGATTGTGGGAAGAATTTCTCAAGCAGACAAGGGCTTTGGGAGCACTGCCGCATCCATACAACCGAAATGAATTCATTCAAATGCTCGGACTGCGGCAAAACCTTCACAAGTCGTCAGGGTTACGTAATCCACATACGAAAGCACACCGACGAGCGTCCATACGGGTGCCGCTATTGCATGAAAGCGTTCAGAGATGGCGGCACATTGCGTAAGCACGAACGCATCCACACCGGCGAACGACCGCACGCCTGCCCCCTATGCGCGAAAGCGTTCAATCAGAAGGTGGTGCTGCGTGAACATATACGCGGCCTACACACCACCAAACTGCAGCCGAACGCGGACGGTCTGTACGAATGTACACTGTGCAACGAACGTATGAACGATACGGACGTGCTGTGCGCACATTTCGTTAAGCATAGCGATGCGATGGCGCAATTGGCGCGCGACGCATCGAAAAGCAATTTGCGGAGGCAGTGTGGTGATGAGGCGACATCTATGATCGAAGCAAACGTGTCGACTAAACAGGAAGCGGAACAAATGCGTACGTTGGAGGCGGAGTTGAATGCGGCGGCAAACGAAATACGCGAACATAACCTATTTAATAAAGATGAGGTTATTGTtgtggatgatgatgatggcgATGGGAAATTGATGAAGGTGGaggtggaggaggaggaggaggagaacGAATGCGGCTTGTGCGGCATTacatttaatagtaaaaaCGAATTCAGTGAACACATTCGCATTCATATTCacgtttga
Protein Sequence: MDTPDFILPVTNEDQTIYTNMTEFQPVVDDEHFNVYGTNDVQLETHDVLMPTNLHATKQLFNTTDDLLNIKIEPGDANATDDESMAVEALRQLGNSTYTLKSARIETTTPHDLPLLPCDTCELEFRTTADLNSHADICKHSQYVCPICNQLFERKQELNNHLVCHAVDRPHSCRLCGTLFIHKHELVQHMSTHGSNINNQCQVCGLEFQRPSSLTNHMKIHNYQPGRALCSTKIENNSDLADILGDVNEPAEEKVILPSISHIASLSGFNLSFRSDSESELSPKSDSKRPYSCVKCAITFSRETALKSHLLLHKDVFDNNTCEHCNKEFNNLQLLDKHKERCFRKKQKAMQSESEVRIESSVVPKLAAKQAPDEDVMKLYKHKCQECGKCFTTNQKLFRHNWIHRKKTYSCELCSKMFDQQSDLDAHRLATHQSGSPYVCFDCGKNFSSRQGLWEHCRIHTTEMNSFKCSDCGKTFTSRQGYVIHIRKHTDERPYGCRYCMKAFRDGGTLRKHERIHTGERPHACPLCAKAFNQKVVLREHIRGLHTTKLQPNADGLYECTLCNERMNDTDVLCAHFVKHSDAMAQLARDASKSNLRRQCGDEATSMIEANVSTKQEAEQMRTLEAELNAAANEIREHNLFNKDEVIVVDDDDGDGKLMKVEVEEEEEENECGLCGITFNSKNEFSEHIRIHIHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -