Dero006441.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Deinopsis erosa
Gene Symbol
-
Assembly
GCA_027574845.2
Location
JAODFZ020013375.1:5671-9745[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.022 2.2 9.2 1.9 2 20 184 202 184 206 0.93
2 20 2.3 2.2e+02 2.9 2.2 1 23 382 405 382 405 0.89
3 20 1.8 1.8e+02 3.2 0.7 6 21 416 431 413 432 0.89
4 20 0.019 1.9 9.4 2.3 2 23 542 564 541 564 0.91
5 20 0.0001 0.0099 16.6 1.0 2 23 576 597 575 597 0.96
6 20 0.0032 0.32 11.9 0.2 2 23 606 628 605 628 0.94
7 20 1.8e-05 0.0018 18.9 0.6 2 23 638 660 637 660 0.96
8 20 2.5e-05 0.0025 18.5 0.2 2 23 663 684 662 684 0.96
9 20 3.7e-05 0.0036 18.0 1.3 3 23 707 727 706 727 0.97
10 20 0.011 1 10.2 2.9 1 23 750 772 750 773 0.96
11 20 0.082 8.1 7.4 0.1 3 23 786 806 785 806 0.96
12 20 1.9e-06 0.00018 22.0 4.7 1 23 831 853 831 853 0.98
13 20 0.21 21 6.1 2.8 3 23 875 895 875 895 0.97
14 20 0.00051 0.05 14.4 0.1 2 23 922 944 921 944 0.93
15 20 0.0041 0.41 11.5 0.7 1 23 964 986 964 986 0.97
16 20 0.0019 0.19 12.6 0.4 1 23 1017 1040 1017 1040 0.95
17 20 0.35 35 5.4 3.1 1 23 1047 1069 1047 1069 0.95
18 20 4.3e-06 0.00042 20.9 0.4 2 23 1080 1102 1079 1102 0.96
19 20 1e-05 0.001 19.7 0.6 1 23 1111 1133 1111 1133 0.98
20 20 0.0015 0.14 12.9 0.3 1 23 1155 1178 1155 1178 0.94

Sequence Information

Coding Sequence
ATGACTGAAAGTGTTGAAGAAAATTACAGCTCTTGCTGTCGACTCTGCTTGAGCGACGGTTCCTTGAACAATATATACTCCGCGTACGTTGATCCTCAGGCTTTGGTTGAGAAAATTAATGACTTCCTCAATGTACAGATAACCGAATCTGATATAGTATCGAAGATGCTATGCGAAATGTGTCATGCAAAAATCACCGCTTGGGATGGCTATAAGAAGAATTGTCTTCAAAATCAAACGAAACTCGCAAAAATGGCCCAAAATGTCACATCTCAAAAAGGAGCGACTGAGAATTTGgtcattcaaattaaagaaGAACCAGCCGATGAGCCGACTTCATTTACCGAATATCAACCACCAGAAGTGAAATTGGAACCAATGAATGAGGATGATACAAATGAAGAGGATAATATCTATGACTTACCACCACCTCTGACACCACATCCCCCCGAAACTGTAGAGGATGATGAAGACTACCAGGATATAGAATTGGAAGTAGAGAATCCTAGCGAATTAGTTGAAGCTAGATTGAATGATTCATCAAAAAGACAATGTTCAGTATGCGATAAGGTATTAAGTACTCCGGGTAATCGAAGGAAGCATGAAAAATGCATGCACGGTTTGCATGGCGGcttaattagaaattcaaGAAAACGAAAACGTTCATTAAGTGTAGCAGttGCAGATGTCGTTCAAGTCGTCCAAGAAGATTTAAATACTGATGATGCTGACGTTGATGAGGATGAGGGAACCGTAGAGCCGGTAGTAGAGAAAGATCGtgacaaaattgaatttgcagCCGGTTTACATcttcaatcaaaatcagcgccTGTAAAGCAATCCGAATTAACAACGATTGAAAAGAAGTATCTGGAGAAATGCCGCATGATGATAACAATGTTTGAAACAAACGTATGCGCCTGTCACAACAATTCCTATACGACGAAGAAGCTGATGGGACATTTGCGTTCGTTATACGCGTGGTTCCCTTGCTACACCTGCTACAATTGCATGGTGACTTACGATGGACGTTCACCTCGCATGCGACACAGCACACAATGTCCGCGTGGTAATTTAGAACAACTTATTCACCTATCGGAGATGCGAGCACGGACAAGCGACAAAATTCGTTTGTATCAGAACTACAAATGCCTCGAATGCAACTATTTATTTGGCTTCTATGAGGATTATTGCGAGCATGTGGATGAGTATCATGTGACTAATGATGGGCCATACACTTGTCTATGCATGAAAGTGTTTGATAATTCCGATTTGTTTAAGCAGCATATACACAAAACGtgttatttgaattattattgtgaTATATGCTTCTTATTAACGTCCGGTTTGGATGAATTCAAACAACATTGTGAGGAATATCACGATCGCGACGAAGATTTCGATTTTATTGTAAAGAATGATATGTTTGCGGTgtacaataatattgaaattggaaatgttttattgaaagGTTTAGAGAATAAGAAGCAACGTTTGAGTATACAGCAACAGAAGCGCATGGAAAATATTGAAGAAACTTTGACAGAGGAAGAAAACACGATTGAAGGTGAAGATTTGGAACGCGTTGTGAATCCAGTTGCTATATTTAAGCAAGGATCCACTcaatgcatcaaatgtgataAGATGTACTCGAGTTATCATAATATGTTACGACATTTAAGTATTACACATGGCGTTACAATACAGAAACGATCCGAATTGACATCGTGCGATGTGTGTGGAAATACGTTCAGTTCGTATTCGAATATGTTACGACATAAGAAGATTCATAATCGGCCTGAAGTGCATAAGAGTTATTGCCGTTTGTGTTCGATGCGTTTTAAGACTGATGACGAGCTAACAGCGCATATTAATGCAGCGCATGATGTTAGGAAGAGCAAAGGGCCGTTACGTTGTCAGGAATGTGGAGAAACGTTCAAGAATCAAACACTCTTGGATGAACATATCAAGAAGAATCATCTGTTAGAATGCGAGGAATgtaataaaacgtttaaatCTGCAGATGATTTAGGGCAACATCGCAGCGTGCATTTGAATATAACATTGTCGCGCGATCCAAAGACGCAAAGCTATCGGCGAATTAGTAACGATAAATTCTGCGAGATTTGCaggaaaagttttaatacGAATGCGGAATTGCAATCGCATAAACGTTTGCATCAAAAGATGCCGACGTTGAATGCCGAAAACGGCGAGGCAGTGCCTGATTTGAAGGATAACAAAAGGTATACGTGCGCAGAttgcaacaaattatatataagtTATAAGAGTCTATGGTCGCATAATAAGAAGCATCATCCGGAGCGTATGACAAAGAAAGGTTTTCCGAAAGATTGTCAAATATGTCAGAAACGAATCACGTCCCAAACCGCATGGGTTGCTCATAAATTGATACACAATCGTCCGGAAAGTAGAAATTCCGTTCACAATAATCAGACTTCAACTGATAGTAATGATGATTCAGATTACCATACATGTAAGAAGTGCTTTAAAGTATTCGCAACCAAATCCAGTTTATCTAATCATATGCGCATGCATGGTATTAATTTAAGTTCATCGCGTTCGAATGCAAAGAATGGAAAGAATTCAAAGACAGTTTGGTGTAATATATGCCATCAAGCTTGCCAAGGAAACGCTGAATTGAATAAACACAAAATGGAACATTTGAACGATGAAAGTGATAATAGTCAAGATAGTAATAGCACAGTGCCTTCAGTAACAAAAGAGAAAATCAAACatgtttattgtaaatattgtaaaataccatttatttcaaatgaattGTTAGAGCAGCATATGTATGAGGAGCATGAAGAAGGGTCTTCATCTCCTCCACCCCCTGAAGTGGAAACAAAGACGTCGAAAAAGCATAAATGCCAGCTTTGCAGGAAGTTGTTTATTAACATGGCTGGTCTAGCATCGCATATGAATTGGCATAAACGAACCAAAactgataaaattatattaatgcaGGAACGTTTGGATAGGAAAGAGAATGCACCAATTTCGCAGCCGAAATCTTTTGAATACAAGTGCAGAACATGCGGTGATACATTCAAAGATGATACACAGCTTCAATTGCATATATTGGAGGTTCATCGTAACGTTCAAGCCACATACAAATGCATTACATGCAACAAGGAGTTTAAATCGCAGAAGGATTGCGCTGCGCATGAAAAGTCCCATGTGAAGACCATTAATGGAAAATCTGGCGTCGAATGTAAATATTGTAGTAAGGTATTTAATCGTAGTGATTATTTGAACATTCATATTAGTAAAATTCATCCTGAACATGCCATTATTGGTACATTTAAATGCACTCAATGTGATCGCGCGTTTGAGAAGCAAAATGCACTTACCATACATCTTAAAGTGCATGAACGCGTCAGTACTGCTAAACAACTCGAGCCACAACccgcaaataataataaagcgcATAAATTTGAATGTTCGATCTGTCATTTTGGATTTGATGTTCCTAAAGAATTAAGGGAGCATATCATTGCTAAACATCCATTTTAA
Protein Sequence
MTESVEENYSSCCRLCLSDGSLNNIYSAYVDPQALVEKINDFLNVQITESDIVSKMLCEMCHAKITAWDGYKKNCLQNQTKLAKMAQNVTSQKGATENLVIQIKEEPADEPTSFTEYQPPEVKLEPMNEDDTNEEDNIYDLPPPLTPHPPETVEDDEDYQDIELEVENPSELVEARLNDSSKRQCSVCDKVLSTPGNRRKHEKCMHGLHGGLIRNSRKRKRSLSVAVADVVQVVQEDLNTDDADVDEDEGTVEPVVEKDRDKIEFAAGLHLQSKSAPVKQSELTTIEKKYLEKCRMMITMFETNVCACHNNSYTTKKLMGHLRSLYAWFPCYTCYNCMVTYDGRSPRMRHSTQCPRGNLEQLIHLSEMRARTSDKIRLYQNYKCLECNYLFGFYEDYCEHVDEYHVTNDGPYTCLCMKVFDNSDLFKQHIHKTCYLNYYCDICFLLTSGLDEFKQHCEEYHDRDEDFDFIVKNDMFAVYNNIEIGNVLLKGLENKKQRLSIQQQKRMENIEETLTEEENTIEGEDLERVVNPVAIFKQGSTQCIKCDKMYSSYHNMLRHLSITHGVTIQKRSELTSCDVCGNTFSSYSNMLRHKKIHNRPEVHKSYCRLCSMRFKTDDELTAHINAAHDVRKSKGPLRCQECGETFKNQTLLDEHIKKNHLLECEECNKTFKSADDLGQHRSVHLNITLSRDPKTQSYRRISNDKFCEICRKSFNTNAELQSHKRLHQKMPTLNAENGEAVPDLKDNKRYTCADCNKLYISYKSLWSHNKKHHPERMTKKGFPKDCQICQKRITSQTAWVAHKLIHNRPESRNSVHNNQTSTDSNDDSDYHTCKKCFKVFATKSSLSNHMRMHGINLSSSRSNAKNGKNSKTVWCNICHQACQGNAELNKHKMEHLNDESDNSQDSNSTVPSVTKEKIKHVYCKYCKIPFISNELLEQHMYEEHEEGSSSPPPPEVETKTSKKHKCQLCRKLFINMAGLASHMNWHKRTKTDKIILMQERLDRKENAPISQPKSFEYKCRTCGDTFKDDTQLQLHILEVHRNVQATYKCITCNKEFKSQKDCAAHEKSHVKTINGKSGVECKYCSKVFNRSDYLNIHISKIHPEHAIIGTFKCTQCDRAFEKQNALTIHLKVHERVSTAKQLEPQPANNNKAHKFECSICHFGFDVPKELREHIIAKHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-