Basic Information

Gene Symbol
JARID2
Assembly
GCA_027574845.2
Location
JAODFZ020027699.1:194-6032[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-22 9.5e-19 67.9 0.0 8 89 1295 1374 1290 1374 0.93

Sequence Information

Coding Sequence
atgGTTTTTAATCGTAAAAGGAAGGATAACCGTTCACCTAGTTTTATTTTAGACGAAAGTCCAAAAAGGACTAAAGTACAGGCACAAAGGAAATTTGCACAAGGCTCAAATGTAAATAGTCCAGTAATAACACCAGTTAAGGAAATTGAAAagcaagaaaaaataattccaGAACCGATCGAATTGTTGCCTATGAAACGACCCAATACAGAGGACTTTCTAACATTCCTTTGTTTTCGCGGTACTCCGGTGTTACCTCCTAGtcttaatttctttaataacgCAAATATGACCGATAATCGGCAGCAATCAGAAACGGCAAGCGTCTCACCAAAGAACGGTGTAATTCTACCAACAACAATCACAAAAAGCGAAAAGCCGTTCATAGCATTTGGGGTACGAAAACGCGCCGATCCTATCGTGGTAAGTCGACATATGGATAAAAAGCGACGACATGCTCTAGCATTACAGGCACTGAGACGAAAATATCAGGAACAAAAAATGGCGAAAATTAGGGCAATCACAGTTAGCAAACTGTCCGAAAAGGTGCAAACGCATACCAACAAAACAGTGGTGCGAACAACACGATCGGTTACGAAAAGTGCAAATATAACGCGTAAGAATATCGCGCAAAAGACAAAAATTACGGTTGTGGCGACGAAACATTTGAAAGTCACGACTAGGAGGACAAGTACACTGAAAACCCCTCTGAAATCGAATATCAACCCGAAAATGTGCTTAAGAAGTTACCGAGGACGATTTGTTCAACGCGAATTgcttaataaaacaaatgcaaagaaggccaataataaaaagtcaatTAAGGAAGATGAGGAagaagaggaggaggaggaggaggaggaagaggaagaagATGAGGAAAATCAATCGAATGATGAAGACGTTGAGGAGGAACAGGAATATTCTTCAGATGATAATAAACCGTTATATAAAACTCAACAAAAGGTTGCTAAGAAATCAGCACCTGGGGTGAAAAAAATATCAGACGTGCGAATTACAAGATCTTCGCAATTGTTAACTCGAAGGCATGTTGCTCAAACGAGATTACGGCCGAagaatgttttaaaatcttCACCGAAAGCGACACGTTTGCGATCGCAGTTACAacgcaaaattgttttgcaacgTAAGCCTGATTTGACGCCGATTAAAAAGAAATCTGTAAGCAAAGTTGTTGATAGcaagaataaaaatgaacataaaattaagaTAAAGAAGGAAGCGAATAAGGCGACTAAAGTGGACGAGGAAGAGAAGAAAAGTAAAACAATAGCAGTTAAAGAATCGAAGAAAGATGCGGATAATAAGcgaattgttaataaaaagaaagcgGATGTTGATGAAACCAAAGAGGATGCgaagaaaaataaacaaagtgCGGATAATAAGAAGGCGGCGAAAGAATCTcaagtaaaattattgaaaaatgaaacTAAAGTCAATACCAAAGAGGATAAAAAGAAGcaggaaattaaaattgagAAAAAGGAGGCAGAAAAGGATAAAACAGTTGCGgataaaaagaaagaagatgcacctaaattaattaagattctGGATAAGAAAGAAGAGAAGGAGTTGattattgaagaaattaagAAGAATTTTAGGGAATGCTCAAAACGAACAATTGTCACCGAAAAAATAACAGAAGTTTTGAAAATACCGGAAGTTAAAAAAGCGGTCATTAAGACAGCATCATTAAAAACtgataagaaaattaagaAGGAGGAGGAATTTAAAGTGTCGCAACGTCCATCgaggaaaacaaaagaagcgGCCGCCATTTATATGGAATTGTTAGGTCAGAAATTAGTTAATGAGGAAGAGGATATTGACGATCTATCAATCGATAGTTTTCCCGAACTACCTAACGCGAGGAAAATGCAACAACGCGAGAATGAGTTGAAAGCGAAAGCGAAGACAACGGACAATCGGAATAAAGATGAGAAGCGTAAATCGGGCGATAAGAAGAATGAACAGAAAACGGTGGATCGGCGACAAACGCGTAATCAAGGCAATACTGTGAAAAGCGCGACGTCTGATTCGGACGCATCGTTTTCCATTGACATTAAAACGCCGCCGGAGAAAATGCATCGACAAACGCGCAACAAGTCGCCgaaattgtataaaagttttacGGACACCGATTCGGATGAGAATGAGCCGCCGATTGTTGTGCGTAAACGTACGGAGAAAAAGTTGAGTGATACCGAGGAGGCGGTGAAGAAGGTGAAGAAATTGGTGGACAATGAGAGTTTCAGCGAGTCGGATGAGGAGCCGTTAGCGAAATTAACGCAGAAAATCGCCGACGATGCAATCGACACGAGTAAAGTGAAGAAGAATAAAGTAAAGGTTGAGAGCGAAATTATTCAAGGTAAACAGAAGCGGGAATGCGCAAAAAGGCCACAGAACTACATAACGTCATTATTTTCATCCTCCGATGAAGaggagaaatattttaaaggatTCAAGAAGACGCCCGAAGTTCCTAAGCCGAAAGTGAATGAACCTACGATTGATTTGTTGTCGAGTAAAGATTTGGGGCGGCGTTATGGTAAAGCGAAAGTGAATATGTCGAATGAGCAAATTGAAAAATGGTTGAATGATAGTGCCATGGCCGGTCTTTCGGATATTAAGAAGGCGAACGATGAGATGTTGAAGTTCGGCGAGAAAATTCCAACGGAAACTTCATTGGATAGCGATATGAGCAATATCAATATGGAAATATTGAAGAATTCGCTGCTAAAACCACATGCAGATAATGTAGAGTTGAAGGCCGATTCGTTGAATACAACGCCCGAGAAATGTACAAGTCCAGTGAAGGCGGCATCCTCATCGAATGAGCGAAAAATGATATTTCGCAAGGAGAAGATTATCGTGCCGTTGCGCAAGACGAACGCGTTTTCGGCGTGCAATGAGAGTAGCGTGTATGCGTTCGAGGCGGATAATGAGGATTCGGTGAGCACGCCATTTCGACGACCGTCACGCCGACCTTCCAGCACCACCAGTCGTTCCGAGGACGAATTATCGCGTGTTGAAAGCGATAATAAGTCAACGACGAAATTTCGTACGCCGCATGTGATTAAAACCGAGATTAAAACGCCGCCTAATAGTAAACAACCGGAAGTTGCGTTGATGCTGTCCACGGCTGATGCGATTACAGTGCATCTGGAAGCGACGAGTGCGAATTGTGCAACGCCACCTACAACAAATCCGCATTTGTTCTATATACCGCTACAACCCGGACAGAAATGTGCGAatagtatacagggtgttgcaATTAAAGTGGGGGGCGCGGAAGCGACACCGAAATTAATCGCGAAACTAGTCACACAAACGCCAAAAATACAACCGCTTTCCCTACCCGCTTCTAGTCCAATGTGTCCTCCCTCCAATCATCCCCTACAGAAACCTAAGTTCGAACATAAGTTAATCAAGCCGACGTGCAGTCGCAGTTCGGATCGTCTCTCCGAAACGTCCGAAGAGTTTAAGTATAAGGTGCCGAGTTCGCCAAGCGCCAGTTCATCCTCCAGCGCCAAATTGTACAATCGGCAGAATGCGAAGCTACGCAAAGATTTGTATATGCCGATTAACACCACTGAATTTCCGAATCTTTTAAGTCCGGCGCAAATTGTGGAAGCGCCCGTCTTTCATCCATCCGAAAAAGAGTTCATCGATCCGTTGGAGTATATTGCGAAGATACGTGCCAGAGCCGAGAAGTTTGGCGTCTGTAAAATTGTCCCACCACCGAATTTCAAGCCCGAATGCAAGGTATTAGATGAGATGCGTTTTACGGCGTATAATCAGTACGTGCATAAAATGATGCATCGATGGGGTCCGAATTTCCGTGAATTGGTTGCCATTCGCAAGTATTTAGCCACACAAAGCATCAATTTGAATCATCCGCCATGGATTGGTGGAATGGAAATTGATTTGCCGCGGTTATACCAAACCGTACAATCATTAGGCGGACTTAAGGAAGTGATTGAGAAGAAGAAATGGCCGCGCGTTTCTGAAATGATGAAAATTCCGAAATCGGCGCAAGATCGTGTAACGAAATTAGATGATATATATTGCAAATATCTTTTACCCTACGACACATTATCACCagATGAACgcgataaattatttgattcagTTGAAACGGAATGGGCGAAACGTGAATCAAAGAATTTAGATGCAAAAGTTCAGGAAGCAGACGATACCAAAGCGAATGAAGATGAGGAATCGGAggatgaggaggaggaggacgaTGAATCGGATACGGAATGTATTGTGAAAGGTCGCAGTATGGCGTTGAGCGCATTCTATCGTATAGCGCGCAATACAATGTCGATGTGGTTTCGCACTCCGGAACCGGGCGCGCACGAAGTGGAAGAGGAGTTTTGGAAGCATGTCACGCAACGACAATACCATCTATGCGTGCATTCCGGTTCGATTGATTCGGGTAGTTGGGGCTACGGCTTTGCCGTATCGAAAAACAGTCCGTTTGCAAGGCATGCGTGGAATTTGAAAGTGCTGACGAACAATAGCGGATCGGTGCTACGCTCAATGGGACCGGTGATGGGTCTGACGGTACCCACATTGCATGTGGGCATGGTGTTCAGCGGATGCTGTTGGTATAGGGATCCGCATCGGTTACCGTGGATAGAATATTTGCATACGGGCGCTAATAAAATATGGTACGGCATACCCGATTCGATGAGCGAAAAATTTCATACAACTCTATTGAAATTAGTTCCGAATTATTGCATAGATAAATCGATTTGGTTGCCTTCCGATACGGTTATGTTACCGCCCGATTTATTAGTCGATAATGGCGTTTCCTTAACGCGCACTGTACAAGAGCCCGGACAATTTGTAGTTATATTCCCTAAAGCGTTCACCTCGAATATATGCACCGGCTATGTGGTTTCAGAGAGCGTTTTTTGGGCGACGCCAAATTGGTTGAATTGTGCGGAGATTGTGTTCGATGAGTTGCGGAATAGCTGTGAACCGTCTATGTTCTCCTATGAACGCTTACTGCTGAGTATTGTGGCGGATACGCGAAGCGATCCGAATGTGCTAACGCAAATCATACCAGCGGTGCAGAAAATGTGTGATCGTGAGCGCAGGGAGCGCGAAAAACTGAAAGTGTTGCGCGTGTTGAAAGAGGAAAAGTTACCTTTACCCGAtgttaagaagaagaagaagatgcaGGATACGGAAACGGAGTATGCGTGCGAGGATTGTCGATGGaatttgttttgttcaatgGTGTGCGAAAATCAAGagaatgcaatttattgcTTGGAGCACGCCATACAGCATATACAGGAGAAAGATTTAGATCCCGACCAGTGTAAATTAATGTACACGTATAATACGAACGAATTAAACGAATTGATTGATAAGCTAAAAGCTACAATTGAAATGAAAGTTCAGAAAAAGATTGGCAGCAAATTTGTTGGAATGGCTACGTTActaaatagataa
Protein Sequence
MVFNRKRKDNRSPSFILDESPKRTKVQAQRKFAQGSNVNSPVITPVKEIEKQEKIIPEPIELLPMKRPNTEDFLTFLCFRGTPVLPPSLNFFNNANMTDNRQQSETASVSPKNGVILPTTITKSEKPFIAFGVRKRADPIVVSRHMDKKRRHALALQALRRKYQEQKMAKIRAITVSKLSEKVQTHTNKTVVRTTRSVTKSANITRKNIAQKTKITVVATKHLKVTTRRTSTLKTPLKSNINPKMCLRSYRGRFVQRELLNKTNAKKANNKKSIKEDEEEEEEEEEEEEEEDEENQSNDEDVEEEQEYSSDDNKPLYKTQQKVAKKSAPGVKKISDVRITRSSQLLTRRHVAQTRLRPKNVLKSSPKATRLRSQLQRKIVLQRKPDLTPIKKKSVSKVVDSKNKNEHKIKIKKEANKATKVDEEEKKSKTIAVKESKKDADNKRIVNKKKADVDETKEDAKKNKQSADNKKAAKESQVKLLKNETKVNTKEDKKKQEIKIEKKEAEKDKTVADKKKEDAPKLIKILDKKEEKELIIEEIKKNFRECSKRTIVTEKITEVLKIPEVKKAVIKTASLKTDKKIKKEEEFKVSQRPSRKTKEAAAIYMELLGQKLVNEEEDIDDLSIDSFPELPNARKMQQRENELKAKAKTTDNRNKDEKRKSGDKKNEQKTVDRRQTRNQGNTVKSATSDSDASFSIDIKTPPEKMHRQTRNKSPKLYKSFTDTDSDENEPPIVVRKRTEKKLSDTEEAVKKVKKLVDNESFSESDEEPLAKLTQKIADDAIDTSKVKKNKVKVESEIIQGKQKRECAKRPQNYITSLFSSSDEEEKYFKGFKKTPEVPKPKVNEPTIDLLSSKDLGRRYGKAKVNMSNEQIEKWLNDSAMAGLSDIKKANDEMLKFGEKIPTETSLDSDMSNINMEILKNSLLKPHADNVELKADSLNTTPEKCTSPVKAASSSNERKMIFRKEKIIVPLRKTNAFSACNESSVYAFEADNEDSVSTPFRRPSRRPSSTTSRSEDELSRVESDNKSTTKFRTPHVIKTEIKTPPNSKQPEVALMLSTADAITVHLEATSANCATPPTTNPHLFYIPLQPGQKCANSIQGVAIKVGGAEATPKLIAKLVTQTPKIQPLSLPASSPMCPPSNHPLQKPKFEHKLIKPTCSRSSDRLSETSEEFKYKVPSSPSASSSSSAKLYNRQNAKLRKDLYMPINTTEFPNLLSPAQIVEAPVFHPSEKEFIDPLEYIAKIRARAEKFGVCKIVPPPNFKPECKVLDEMRFTAYNQYVHKMMHRWGPNFRELVAIRKYLATQSINLNHPPWIGGMEIDLPRLYQTVQSLGGLKEVIEKKKWPRVSEMMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPDERDKLFDSVETEWAKRESKNLDAKVQEADDTKANEDEESEDEEEEDDESDTECIVKGRSMALSAFYRIARNTMSMWFRTPEPGAHEVEEEFWKHVTQRQYHLCVHSGSIDSGSWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRSMGPVMGLTVPTLHVGMVFSGCCWYRDPHRLPWIEYLHTGANKIWYGIPDSMSEKFHTTLLKLVPNYCIDKSIWLPSDTVMLPPDLLVDNGVSLTRTVQEPGQFVVIFPKAFTSNICTGYVVSESVFWATPNWLNCAEIVFDELRNSCEPSMFSYERLLLSIVADTRSDPNVLTQIIPAVQKMCDRERREREKLKVLRVLKEEKLPLPDVKKKKKMQDTETEYACEDCRWNLFCSMVCENQENAIYCLEHAIQHIQEKDLDPDQCKLMYTYNTNELNELIDKLKATIEMKVQKKIGSKFVGMATLLNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-