Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027574845.2
Location
JAODFZ020043998.1:8960-14642[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.2e-24 9e-21 74.4 0.0 2 89 107 190 106 190 0.95
2 4 8 2.2e+04 -3.9 0.0 29 45 774 790 769 795 0.86
3 4 2.9 8.2e+03 -2.4 0.0 44 67 961 985 954 997 0.66
4 4 2.1 5.8e+03 -1.9 0.0 35 81 1237 1285 1232 1290 0.59

Sequence Information

Coding Sequence
ATGTCAACAAAAGACGGAAAAACAAGTCCTACATTATCAATAAACGGAAACATTTCATGTGAGGTGAATGGAAAAGTACGACAAGATGTTTTTGAGTTTGTTGTGCCTCCGGAAGCTCCCGTTTTCAATCCAACTGAAGCAGATTTTAGCGATCCCTTAGTCTACATCGATAAAATACGACCGATTGCTGAAAAATATGgaatatgcaaaataaaaccACCATCAaattggCAGCCTCCTTTTGCCGTAGATgtagataaattaaaattcacacCACGTATCCAAAGATTAAATGAATTAGAGGCAAAAACTAGGATAAAACTAAACTTTTTGGACCAAATAGCTAAATTTTGGGAGCTTCAAGGATCCTCCTTGAAGATTCCGATGGTAGAGAAAAGAGCACTTGATTTGTACACACTACACCGGCTAGTAGAGAATGAGGGAGGTTTTAGTACAGTAACAAAGGAACGAAAATGGGCTAAAATATCAGTTATTATGGGATATCCGAATGGGAAAGGAATCGGAACAATTCTTAAAACACATTACGAAAGGCTTTTATATCCTTTCGAACTATTCACAAGTGAGAAGAAATTAGCTGAACCAACAGCCTTGGTGGAAGTTAAAGAAGAAGATGACAAAGATTACAAACCTGGAAAAACCAAAATGATGAATGGTATGTCAATGAATCATCGCAAAAATGGTTATACAAGACGAAGTAAAGGCAAAGAACGTATCAACGGCGTTATAAAGGTAGCAGTTGTCGAGGAGGAAGAAATCAAACAAGTTTTAGTAACTGATAATGATTCTGATAATAAAGAATTGAAAAGATTGCAATTTTATGGTGCAGGACCGAAAATGGCTGGATATAATGAGAAAAGGAAAAGcgatcataaatttaaaacagatGAAAATGGATTGTTAGATCCTTTGGCGAAATATATTTGTCATAATTGTCGTCGTGGCGATGCTGAAGAGCAAATGCTTTTGTGTGATGGATGCGATGATAGTTATCACACATTTTGTTTGATGCCACCGCTGGTTGAAATACCGAAAGGTGATTGGTGCTGTCCGAAATGCGTCGCTGCTGAAGTTTCCAAACCGACTGAAGCGTTTGGCTTCGAACAAGCGCAACGAGAATACAATTTGCAACAATTTGGGGAAATGGCAGACACTTTTAAATCAGAATACTTCAATATGCCTGTCCATcTTGTGCCAACTAAAATGGTTGAGAAGGAATTTTGGAGGATTGTTTCATCGATTGATGAAGATGTTACTGTGGAATATGGCGCGGACTTGCACACAATGGATCATGGATCTGGTTTTCCAACAAAGAATTCGATTAACTTACTTTCTCATGATCAGGAATATGCGTATTCTGGATGGAATTTGAATAACTTGCCAGTATTGGAGGGTTCTGTTTTGGGTTACATAAACGCTGATATATCTGGAATGAAGGTACCATGGATGTATGTTGGCATGTGTTTTGCAACATTTTGCTGGCATAATGAAGATCATTGGAGTTATTCCATAAATTACCTTCATTGGGGTGAACCCAAAACCTGGTACGGTGTGCCCGGCAAGGATGCagttttatttgaagaaaaaatgaaacaagCTGCACCTGAATTATTTCAAACACAGCCCGATTTATTACACCAACTTGTCACTATAATGAatccaaatattttaatgaatgccGGGGTTCCTGTTTATAGAACCGATCAACATGCTGGTGAATTTGTGATTACATTCCCGCGTGCTTATCATGCGGGATTTAATCAAGGGTACAATTTTGCTGAAGCTGTTAATTTTGCTCCGGCCGATTGGGTTGCAATGGGACGCGAATGTGTATTACATTACTCACAACTACGCAGATTTTGCGTTTTTTCACATGATGAATTAGTCTGCAAAATGGCTACGAATTCAGATCAATTAGACATCACAGTCGCAGCTGCTACTTACACTGACATGCTACGAATGGTTGAAACAGAGAAGAAATTGCgaaaaagtttattagatTGGGGTGTGACTAATGCCGAACGTGAAGCATTTGAATTACTACCAGATGATGAGCGACAATGTGAAGTTTGCAAAACGACCTGTTTTATGTCAGCTTTAACATGCAGCTGTTCAACGGAAATGTTAGTTTGCTTAAGACATTACACATCGCTTTGTAAATGTCCATCCAGTAAACACACATTGCGTTATCGTTACACCTTAGATGAGTTATTACCGCTGCTACGTAATTTAAAGGAAAAGGCTGAGTCATTTGATCGGTGGGCGGATAAGGTGAAGGATGTATTGAATAGGAAGAAACCGAAAACTGTTGATTTAGCCGATTTGAAGTCCTTGATTGTTGAAGCGGATGgtaaaaattttccaaaatctGATTTATTAGAAAGTCTATCGAATGCGATTGAAGACGCTGAAAAATGCGCCAGCGTTATTCGacaattagatttaaataaaatacgcaCCCGTCATtcatatgataataaaagtaagCTCACTTTAGAGGAACTACGTCTATTTTGTGAGGAAATAGACGGTTTAGCATGTATTTTAGAAGAAGAGAAAATTATAAAGGAGTTATTagacaaaacaaataaattcgaAGATGATACAAAACGTTTATTAGGGCTCAACTTAAAAGATTGTGCGCTAAAAGAGGTGGAGGAATTAATAGAATCTAGTAGCGCATTATGTATTGATTTACCGTCGGTCAAACCATTAAAAGagaaattcaatcaattaaagTGGATACGAGATGTTAGTGACGCTCGAACGCCATCCTCCGATATTGCAGATATTGATACATTGAAGGAGTTATTACGCAGAGGTTGCAGCCTTCCCGGTGATAAATTAATCGATACAATTATGGGTGAAGTTCAGGCTGTTATTTCTGAAGCAGAAGATTGGGAGGAACAAGCACAATCCTTATTTACGAAGAAAGGTTCGGATATAATCGCTGAAGCTGAACACCTGATTAAATTGGCATCTGAAATTGATGTGTACCTTCCAACAGAAAATTTACTTGTCGATAGTGTGAATAATGTTAATGATTGGTTTAAGCAGCTACAGGAAATTAATTCATTGGAATATTATCCATATTTGACTGCGATTGAAGAGCAGGTTAAGAAAAGTCGACACTTTCCATTCAATCTCGAGGAAATTGAACGTTTGAAGGCTTATATTGCATCAGCGAATGCTTGGAAAGATAAAACATCAAAAACATTCCTAAAAAAGAATTCGAATTGTACTTTAATGGAGGCTTTATCTCCGCGCACCCAAACAACCCCAGTGAAAGGTAGAAAGAGGAATAATGAAGATTGTATACGTTTAGGCGAGAGTATGGATCCTGCTTCGGTTGTGGCCGCCTTCAAAGATGCCGAGGATCGTGAAAtgagattaataaaaaatttacgtaCAGCAAATATGACAAAAGTATTAAAACCAGGCAGCGAATCGACGTTTTGTGTTTGTCAGAAGGCTGCTTATGGTCTTATGATGCAATGTGATTTATGCAAAGATTggtttcattcaaattgcgtGCAATTACCTAAAGTTAGTGCGAGTCgcttaagaaaaaattttaaatcggTTGTTTTACATATGGGATTCAAAGACTGCAAACAATTATGTACAAATTGCTTTAGAACAAGACGACCACGTCTTGAAACAATTCTAACTCTATTAATGtcattacaaaaattacaCAGCCGTTTGCCGGAAGGTGAGGCATTACAATGTCTCACTGAAAGGGCTATGAACTGGCAGGATCGAGCCAGACAACTATTACAAAGTCCCGAATTGACAACAGCAATGAATAAATTGACATCGTTAACACAAAAGTATACTGAAGCAGCTGCTAAGatgaaaaccgaaaaaattaTAACGTCTGAATTGAAGAAGGCTGCGAATAATCcggaattacataaaaaagtaCAAGAACTCAATGCAATTAGCGGTCTTGCTAATGAGGATGACGATACCATAAATAGTATTTCTTCAGATGAGGATGATTCGAAAGAGGAACATGCctattcaatgaattttggAAAGTTTGAAGATAATGATTGTAGTGTTTCAATAAACGCACAAGCTAAGGAGCATTTAGAGGAGTTGATGATTGAAGGTGATTTGCTGGAAGTCTCTCTCgatgaaaataatcaattatggCAAATCAGTTTTCTGTCACGTGATTTACAAAAGGATCCACTACTTATTGATTTTGATattatacAAAAATCAACCACATCACCACTAATCAACAAGAAGGGTAGAAAGCGTCGTTCGGAAGAAGCTGAAATAACAAATCTTTGCATCAAAAACGGTATCAAAAAAGATATCATTAATAAGAAGATGAAAGGGCCAAGAAAGAACAAAGATCGTGCGGTAAAGCCAAATCGTAAACGCAAAGGTCGTGCTGCACATGTCAAAGCAGATAatgaggatgatgatgatgaagacgATGACGATATGGATGAAGATGCAATGTGCGCTGTATCGACATGTTTACAACCATCTGGCGATGAAGTCGATTGGGTGCAGTGTGATGGCGGATGCGAGCAATGGTTTCATATGGCATGTGTTGGACTCTCAGTAAAAGATATAAACGAGGACGAGGATTATATATGTTCTGCTTGCACACAAAGACTAAAAATGtctatagaaatataa
Protein Sequence
MSTKDGKTSPTLSINGNISCEVNGKVRQDVFEFVVPPEAPVFNPTEADFSDPLVYIDKIRPIAEKYGICKIKPPSNWQPPFAVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFSTVTKERKWAKISVIMGYPNGKGIGTILKTHYERLLYPFELFTSEKKLAEPTALVEVKEEDDKDYKPGKTKMMNGMSMNHRKNGYTRRSKGKERINGVIKVAVVEEEEIKQVLVTDNDSDNKELKRLQFYGAGPKMAGYNEKRKSDHKFKTDENGLLDPLAKYICHNCRRGDAEEQMLLCDGCDDSYHTFCLMPPLVEIPKGDWCCPKCVAAEVSKPTEAFGFEQAQREYNLQQFGEMADTFKSEYFNMPVHLVPTKMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSINLLSHDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGKDAVLFEEKMKQAAPELFQTQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWVAMGRECVLHYSQLRRFCVFSHDELVCKMATNSDQLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEVCKTTCFMSALTCSCSTEMLVCLRHYTSLCKCPSSKHTLRYRYTLDELLPLLRNLKEKAESFDRWADKVKDVLNRKKPKTVDLADLKSLIVEADGKNFPKSDLLESLSNAIEDAEKCASVIRQLDLNKIRTRHSYDNKSKLTLEELRLFCEEIDGLACILEEEKIIKELLDKTNKFEDDTKRLLGLNLKDCALKEVEELIESSSALCIDLPSVKPLKEKFNQLKWIRDVSDARTPSSDIADIDTLKELLRRGCSLPGDKLIDTIMGEVQAVISEAEDWEEQAQSLFTKKGSDIIAEAEHLIKLASEIDVYLPTENLLVDSVNNVNDWFKQLQEINSLEYYPYLTAIEEQVKKSRHFPFNLEEIERLKAYIASANAWKDKTSKTFLKKNSNCTLMEALSPRTQTTPVKGRKRNNEDCIRLGESMDPASVVAAFKDAEDREMRLIKNLRTANMTKVLKPGSESTFCVCQKAAYGLMMQCDLCKDWFHSNCVQLPKVSASRLRKNFKSVVLHMGFKDCKQLCTNCFRTRRPRLETILTLLMSLQKLHSRLPEGEALQCLTERAMNWQDRARQLLQSPELTTAMNKLTSLTQKYTEAAAKMKTEKIITSELKKAANNPELHKKVQELNAISGLANEDDDTINSISSDEDDSKEEHAYSMNFGKFEDNDCSVSINAQAKEHLEELMIEGDLLEVSLDENNQLWQISFLSRDLQKDPLLIDFDIIQKSTTSPLINKKGRKRRSEEAEITNLCIKNGIKKDIINKKMKGPRKNKDRAVKPNRKRKGRAAHVKADNEDDDDEDDDDMDEDAMCAVSTCLQPSGDEVDWVQCDGGCEQWFHMACVGLSVKDINEDEDYICSACTQRLKMSIEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-