Dpor000665.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- nfxl1
- Assembly
- GCA_905220455.1
- Location
- LR999993.1:9665500-9667977[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.01 1.2e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 3.1e-07 0.0037 17.6 15.9 3 19 186 202 185 202 0.95 4 19 1.9e-07 0.0022 18.3 14.3 3 19 239 255 235 255 0.92 5 19 0.86 1e+04 -2.9 1.2 5 10 279 284 279 284 0.83 6 19 2.3e-09 2.7e-05 24.5 10.2 1 19 290 308 290 308 0.97 7 19 1.2e-06 0.014 15.8 18.3 3 19 345 361 344 361 0.93 8 19 0.2 2.4e+03 -0.9 0.8 1 5 370 374 370 379 0.79 9 19 2 2.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 19 1.2e-06 0.014 15.8 16.0 1 18 395 412 395 413 0.97 11 19 5.8e-09 6.8e-05 23.2 16.8 1 19 422 440 422 440 0.99 12 19 0.011 1.3e+02 3.1 4.0 9 19 488 498 486 498 0.88 13 19 0.0015 17 5.9 7.5 1 11 508 517 508 518 0.95 14 19 0.31 3.7e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 19 3e-06 0.036 14.5 4.1 1 11 588 598 588 599 0.97 16 19 1.8 2.1e+04 -4.0 1.9 15 18 613 616 613 617 0.87 17 19 0.00037 4.4 7.8 15.0 3 18 629 645 628 646 0.85 18 19 2 2.4e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 2e-06 0.024 15.1 12.7 1 16 687 701 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCAAGAAGATATAGAGATGCCGCAGCAAAACTGCAGCAAAACGTGCAAAAACACTTGCAGGAAATGAAAGAGTTATCATCATCTGAAGATGAGGAGCCATTTGAATCGAGCTTATTGGAAGGAGTTTTGCAGAGGTATTGCAGGGGTGGAGGAGACTCCCACATGCTAAACAGAACCAAGAATGTCCTAGAAGAAGCCATCAGCGGCCGGTCCATAACCTGTCTTATTTGTATAGGTTCCATCAAACGAGCCGATGCTATATGGAGTTGCGGCAACTGCTACTGCCATTTCCACCTATCCTGCATCCAGAAATGGTCTAACGACAGCATCAGCCTCCGGACTGAGGCGCCCCAAGCCCCTGTGTCAGTATTTGTCTCAAAGAAAGTGGAGTGGTGCTGTCCTAAATGCCGGCATTCGTATTCCAAAGAAGAAATACCGCGTAAATACAGATGCTTTTGTGAGAAAACTGATGACCCACCATACCATCCATGGTTGCTGCCTCATACTTGTGGTGAGGTGTGTGGTAAGAGATTATCTACTGGTGAAAGTTGCAAGCATAAGTGCTTACTGCTTTGTCACCCTGGGCCATGTCCACCCTGTCCTCAGACTGTTAATGGTGCTTGTTATTGTGATAAAGAACGTAAAAAGGTCAGATGTAGTGCTGCTAAGTGGTCATGTGGTAAGTCTTGTAAAAAGTTGTTACTTTGCCATACACATAAATGTGAGAATGAGTGTCACGAAGGAGAATGCCCTCCGTGCAGCTATACCAGTGTGCAGGCCTGCCAATGTGGCAGTGAAAAGGGAAAACGCCCATGCAATGATCCCATTTGGAATTGTAAAAAACCATGCAACAAAAAGTTTTCTTGCGGATTTCATAAATGTGAGAAAATCTGCCACTCAGGTGACTGTGGTGATTGCTCTAATTCTGGCATGAAGTCTTGTCCATGCGGAGCTAATAAGAGATACGTACAGTGTCCAGATGTTATGGAGACATGCTTAGGAACTTGCAATAGAATACATGAGGACTGTGAGCATAACTGCCCAGAGAAATGCCACAAGGGGCCTTGCCCACCCTGCCAGGTTCTAGTCCAGAAAAAATGTCAGTGCGGCACACATACAAGATCTCTACCATGCAGTAAAGAATTTAAATGTGAAACTAAATGCCGAGGCACAAAGGCTTGCGGCAAGCACAGCTGTGCTCGCAAGTGCTGCAATGGTAACTGCCCAACTTGTGAAAAAATATGTGACAAACCTCTTCAATGTGGCCGACATAAATGTACCAGCATCTGTCATCATGGTCCATGCTATCCCTGTCCGAGAGAATCTAAAATTACCTGCCGCTGTAAAGAGACATACATCACTGTACCTTGTGGCAGAGAAAAGTTTGTAAAACCACCAAGATGTTCTTTGCCCTGCAAGATTAAATACAAATGTGGGCATTCAGAACAAAACAAACACTCTTGTCATTTTAATGACTGTCCTCCTTGCAAAGCTATTTGTCACAAGACATATCCAAATTGTGGACATGAATGCAAAGCTACTTGCCATGCATATGTCGCTGTTGTTTTCAAGCAGATAGAAAAACCAGCTACACCGTGGGAAGTGCAGCCACCAAAGACTAAAATTATGACTTTAGATTGCCCTCCGTGTGAAAAACTTGTTTCAGTGATATGTTTAGGAGAACATGAGACTGAAGAACAACAATGTCATTTAGCAACTAGAAGATCCTGTGGGAGGCAATGTGGCCGCCCTTTGCAATGTGGCAACCATACATGTGCTTTATTGTGTCATCTCATTAGTAACAACGATAAGACTCCCAATGCTTCTCTTGGTTGTAAACCATGTGAGAAAGAATGTTTGGTGCCCCGTCCCGAAAAGTGCATTCACAAATGCCCTAAACGGGGCTGTCATCCAGGAGCCTGCCCTCCTTGTGATTTAATAGAGAGGATACCTTGCCACTGTGGCGTCACAGAGTTATATCTTCGATGCCGAGAACTGTCAACTGCCACAGAAGAAATGTTGTCTTGTAAGCAACAGTGCCCTAAGAATTTGGAATGTGGGCATCGCTGTCGTAACACCTGCCACTCCGGCCCGTGTGGCAATCAGATCTGCTCACGAAAGACTAAAATCCACTGCCCATGCTCAAACTTAAAGAAAGAAGCTCCATGTAATCTTGTTAAAAATGGAGCAGCAAAAATAGCTTGTGACAAGTCTTGTGAAGAGAAGAAGATTGCATTAAGGCAAGAAAGAGAAAGAGAGGAACGTAGGCAGAAAGAGTTAGAAGAAGAGAGGAACCGAAAAGAGCTAGCTGAATATGAGTGGAAGTTGAGTGGCAAAAAGAAAAAGTACAAGGAAAGGAAAGTTACAGTTAACAAAGATGATAGGAATTGGTTGCAACGCTATTGGATTCTTATTATTTCTATTTTAACTGTAGTTATTGCAGCTGTATATTACATATTTTATGTGAAAATTTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQEMKELSSSEDEEPFESSLLEGVLQRYCRGGGDSHMLNRTKNVLEEAISGRSITCLICIGSIKRADAIWSCGNCYCHFHLSCIQKWSNDSISLRTEAPQAPVSVFVSKKVEWCCPKCRHSYSKEEIPRKYRCFCEKTDDPPYHPWLLPHTCGEVCGKRLSTGESCKHKCLLLCHPGPCPPCPQTVNGACYCDKERKKVRCSAAKWSCGKSCKKLLLCHTHKCENECHEGECPPCSYTSVQACQCGSEKGKRPCNDPIWNCKKPCNKKFSCGFHKCEKICHSGDCGDCSNSGMKSCPCGANKRYVQCPDVMETCLGTCNRIHEDCEHNCPEKCHKGPCPPCQVLVQKKCQCGTHTRSLPCSKEFKCETKCRGTKACGKHSCARKCCNGNCPTCEKICDKPLQCGRHKCTSICHHGPCYPCPRESKITCRCKETYITVPCGREKFVKPPRCSLPCKIKYKCGHSEQNKHSCHFNDCPPCKAICHKTYPNCGHECKATCHAYVAVVFKQIEKPATPWEVQPPKTKIMTLDCPPCEKLVSVICLGEHETEEQQCHLATRRSCGRQCGRPLQCGNHTCALLCHLISNNDKTPNASLGCKPCEKECLVPRPEKCIHKCPKRGCHPGACPPCDLIERIPCHCGVTELYLRCRELSTATEEMLSCKQQCPKNLECGHRCRNTCHSGPCGNQICSRKTKIHCPCSNLKKEAPCNLVKNGAAKIACDKSCEEKKIALRQEREREERRQKELEEERNRKELAEYEWKLSGKKKKYKERKVTVNKDDRNWLQRYWILIISILTVVIAAVYYIFYVKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00820620;
- 90% Identity
- iTF_00820620;
- 80% Identity
- -