Basic Information

Insect: Deilephila porcellus
Gene Symbol: -
Assembly: GCA_905220455.1
Location: LR999978.1:14118879-14134428[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.19 14 6.8 0.1 2 23 467 488 466 488 0.93

2 14 0.023 1.7 9.6 0.0 1 23 498 521 498 521 0.93

3 14 0.14 10 7.2 0.9 2 21 605 624 605 625 0.94

4 14 0.018 1.3 10.0 1.6 2 23 689 710 688 710 0.95

5 14 0.00069 0.051 14.4 2.7 2 23 753 776 752 776 0.96

6 14 0.066 4.9 8.2 0.2 1 23 782 804 782 804 0.93

7 14 0.0032 0.24 12.3 2.9 1 23 810 832 810 832 0.98

8 14 1.5 1.1e+02 4.0 0.0 2 19 843 860 842 863 0.90

9 14 0.044 3.3 8.7 0.3 1 23 943 965 943 965 0.96

10 14 0.012 0.93 10.5 3.9 1 23 972 994 972 994 0.98

11 14 0.0013 0.097 13.6 1.8 1 23 1030 1053 1030 1053 0.95

12 14 0.021 1.6 9.8 0.8 1 23 1060 1083 1060 1083 0.96

13 14 0.0049 0.36 11.8 0.2 2 23 1106 1128 1105 1128 0.96

14 14 0.00015 0.011 16.5 0.5 1 23 1138 1160 1138 1160 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.19	14	6.8	0.1	2	23	467	488	466	488	0.93
2	14	0.023	1.7	9.6	0.0	1	23	498	521	498	521	0.93
3	14	0.14	10	7.2	0.9	2	21	605	624	605	625	0.94
4	14	0.018	1.3	10.0	1.6	2	23	689	710	688	710	0.95
5	14	0.00069	0.051	14.4	2.7	2	23	753	776	752	776	0.96
6	14	0.066	4.9	8.2	0.2	1	23	782	804	782	804	0.93
7	14	0.0032	0.24	12.3	2.9	1	23	810	832	810	832	0.98
8	14	1.5	1.1e+02	4.0	0.0	2	19	843	860	842	863	0.90
9	14	0.044	3.3	8.7	0.3	1	23	943	965	943	965	0.96
10	14	0.012	0.93	10.5	3.9	1	23	972	994	972	994	0.98
11	14	0.0013	0.097	13.6	1.8	1	23	1030	1053	1030	1053	0.95
12	14	0.021	1.6	9.8	0.8	1	23	1060	1083	1060	1083	0.96
13	14	0.0049	0.36	11.8	0.2	2	23	1106	1128	1105	1128	0.96
14	14	0.00015	0.011	16.5	0.5	1	23	1138	1160	1138	1160	0.97

Sequence Information

Coding Sequence: ATGGCTACTCAACAACCACTGATACTGTGTTTGGACAACTCCTTGGGTGAGGAAGTGGCTCTGAGGGTTGAACCAGAAGAAGACTTCCAAACATTCTTGGAGAAAGCCAGAACACTTCTAGGCTATGAAGTTGACATCAACCTTATAACTGGGAACCAACAAGTGTCTCTAAGTGAAAATATGTATCAATTTCTCCTCAATGCAGAGCAACACATGCAAAACACACAATTTGATCAAATGTTGGAGTCAAATCCTGATTCACTTTATGTCTTAGATGATGGAACTCAGATCAGGGCTTCTCAAATACATTTCGATAATGATGACCCACCAGTCGACTTTGCTGTTGGGAACATTCCATTTGTGAAATACCGAAATGATGATGATGACCTGGATCTGGAAGACCTTGAGATAGAAAAAACCGTAGATTACAATATAATCGAAAGTCCCGTTGCAAAATGGTCGAGCCATAGCTCAAGTCCGAAAAACTTCGCCAACACTCTCCCATTTAAGCTGGTTTGTTCAAATGCTACAGCTTTTGAAAGCCAATTTGCTAAATATCTGGAATCTAAAACGTATGCAACGCTAGACAATGTAACTAATAACAAATCGCCTAGGAGTTTAATTCGTGAAAACTATTCGAAATACGATGATAACTATCCTCGTAAAAGCGATAATTTCAGTTGTACCAGAGAAGAGATTCTGAATATGTTTAAAGATTCGCCGGTAAATTCCTTGCCATATGAAGGTTACACCGAACGGAGGCATGTACGAAAAAGTGATCCATCTCGGATACACAAAAGCTTTAAGCCCCTATCCGCGGATTTGGATGGCGTATTGATCGGTGAAAACGGGAACCAAACCTGCTTTATATGTGATAGAAAAGTAGAGAGGGAGAAGATATACTTATTTGACAACGAAGACCAGAAAATTCATAGAAAATCACCACAGAAGAAAACAGAGACACAGTTGAAGATCATTTGCGAAAAATGCTTGAATGAAAACTTCGCACCGTGTTCAATGAAGGGAGCGAATCAATTCTTGAACCCAGACGAGTATTTGGTGATAAGGAACAACCAGCAATACATATTTAAGAAAATAAAGAATATCAATTTCAAGATTTCGAATAGTCGTGGGAAGAGGAGCGATAGTATGAACGCGGTTTCTGAAGAATTTGTTAAAGTTGAAATAGGTTCTGACGGTGAGATAATAACGAAGCCAATTGACGAAAAGTCTGATGATGTGATAGTAGTTAAAGACAAAGATAGCTCGAGCGATGTGGAAATCATTGAACCGGAAACGGAAATAGACAAGATCATAGACAATCTGGAAGTTGCTGATGAGGAAGTAAAAGAGTTTTTGGGGAAATATCAATGTGATGGAAGTAATGAGGAGGAACTTAAATGCCGATTCTGTGACACCGTATTTGCAAATATAACCGAGGTGACAGATCATGGAGAAGTACATAAACATGAAGTTGACGATGAGCATTTGTATCCGTGCCCGCTTTGTAACTACGGTTACGCCAATTTCAAATGGCTCAAAGGGCATCTGATTGCTGCCCACGAAAAGAAAGATTCCAGTGATATAAAAAAAGAAACCACTGATGTTACGGAGCAAGGGACAAACGAGGTTCAAGAACAAGACAAAATAGAAATCAAATGTGAAGTAGTGGACGAAGAGAACCCTCCAAGTAGCGATGATGAAATATGGATAGTCCAAACAGCTGATGTGGAGGCGACGGACCAGCTGCAAAAGTTGCTTGATGCTGCTAAGGGCGTTGAGGGTGAAAAGAGTGCCTCTAAGAAGACTCCAAAATGTCTAAATTGCAGTCAAACGTTTCCTTCACTGGAGGCCTTGGCGACGCATCGGTGTCGTAGACGCGGTAGGAAGCGCAAATCCGTCGGAAATGACGGCACCATCTGCGTACCCACTCAGGAGGACTTTATTAAGAGAGCACAAGGAAGACCTAGACAAACGGATATAACAAGTGGTGGTAACAGTTTGCTAGTGCCGAAGACTCGCAAAAAGAAGTCCAAGGAGCCGTCATCAGACCCCCAAATAGTGACGTGCGACAATTGTAACGAGTCATTCACCTCGAAAGTTAGACTCAAGTTTCATATGCAGTTCCACGAGTCTACTCAGATGATGACACCTGAGGGTCGGTTCTCTTGCGTGGACTGTGAAGACGCTGTGTTCGACACGGAGACGGCGCTGTTCGACCACGTGCACTTCCAGCACGACAAGCAGAAGCGCTGGCAGTGCCCCGTGCATGGCTGCGGGAAGACTTTCCATCTGCGTGCGACGCTCACCAAGCACAGTCGCACGCACACGGACACGCGTCGCTACGTGTGCGTCACGTGCGGGAAGCGGTTCCTTGACAAACAAACACTGGATGAGCACGGCGTTACACATTTACAGATAAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCGCGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACGCGCAGCACGCGCAGGAGCACGCGACGAAATTCCCCGAGTGCATAGAGACGTTCGCCAACGACCTGAAGGTGGAGGAGGCGGAGGAGGCCACCGTGCAGCTCTCACCAACCAGCGGGATTGTACGACACACCGTCCAGATACTCGAATCTCCAAAACTATCCAAGCCAATACCGAGGCAAGTGGACAGTCCACTCGCCGCGCCACTACTGGCGCAAGTGACGGACGAAGCGAGGTCGATCATACGCGTAGTCGAAATTGAGAAGGCTTTTAGATGCGAATATTGCGAAGATGTGTTCTACTTGGAGGACAGTCTGAACAACCATCGCGTGATACACAAGGGCGTGAGGAATCCTTTTACTTGTCACATATGCAAAGTGAGCTTCGCCACTTACTCCAGAGTGACAACCCACAAGACGACGCACGGGTTCTACAAGCGCTCGCTGGCGCCGGCGCGCGCCGCCGCGGGGCTCGCCGCGCCCGCCGCCGCCGCCATCCTCGGCTACGGAGACTTCCCCGTCGTCAAGCACTTCCTGTGCGAGGACTGCGGCAGATCATACCTCCACTGGACGTATCTTCAAGTGCACAGACGTATGAAACACGCGAACGAAAACTACACGTACGCGTGCAACCAGTGCGAGCTCACCTTTCCAAACAGTTGGAGCGTGGGCCACCACCGTAAGAAGGTGCACGGCAAGTCCGCACCTGACGACCCAACAGCAATAGCCCCCAAAGAAGCGAGGACGAACTACAGAATCCCGTGTCGAGACTGCGACGAGGTTCTTCCGAGCAAGACTGCGTTATACAAACACAGGAAAAAGGAGCATAGCAATATATCCTGCAGACCAGGCGTGTTCTGCTGCGGCACGTGCGGCAAGCAGTACAGCAGCCGCGCGGCGCTGGAGGCGCATGCTCTCACGCACGCCAGCCAACACTGCGACAACTACGAACAACCTGCTGCAGCGCATAAACAACTCAGGGGCAGCGGGCAGCGCGCGCGCCGCCGCCACGCGCACTCGCTCGCCGTGCTCGAGATTGAAGGTTTAAATCATACGCAAGAAGAAATCATGAAGATATTGTCCAATCACAGCATATCGCACGATCGAGTGGTTGAAATCACCAAGATATCTTTCGCACAGGGCACATCAAGCATTATTCCTGATAGTTCCCGCGCATTGTCTTTGTTGAGTGACGTCCCAAGGACGCAGATTACTTGTGTCAAACCATCTGATCGCATCGAGGATGACTTCCAATCGCTTCGTCGTAACCGCATCCTGAGCAAAAGTAGACCAAAAATTCTACAACGCGGCGCCGAAGACAGAACTCCAGCCGACTGCAACAATTACCCGCTCGCTGTCAGCGTCACTGGCGAGGAATTGTCGGATTTGAACGTGCAGCTGTTACTTCGCGATGGTGTTTTGGTTGACGGCAACCAGATGGTGCAACTGCAGTTAAACGACTCCATGTTATTAGAATAA
Protein Sequence: MATQQPLILCLDNSLGEEVALRVEPEEDFQTFLEKARTLLGYEVDINLITGNQQVSLSENMYQFLLNAEQHMQNTQFDQMLESNPDSLYVLDDGTQIRASQIHFDNDDPPVDFAVGNIPFVKYRNDDDDLDLEDLEIEKTVDYNIIESPVAKWSSHSSSPKNFANTLPFKLVCSNATAFESQFAKYLESKTYATLDNVTNNKSPRSLIRENYSKYDDNYPRKSDNFSCTREEILNMFKDSPVNSLPYEGYTERRHVRKSDPSRIHKSFKPLSADLDGVLIGENGNQTCFICDRKVEREKIYLFDNEDQKIHRKSPQKKTETQLKIICEKCLNENFAPCSMKGANQFLNPDEYLVIRNNQQYIFKKIKNINFKISNSRGKRSDSMNAVSEEFVKVEIGSDGEIITKPIDEKSDDVIVVKDKDSSSDVEIIEPETEIDKIIDNLEVADEEVKEFLGKYQCDGSNEEELKCRFCDTVFANITEVTDHGEVHKHEVDDEHLYPCPLCNYGYANFKWLKGHLIAAHEKKDSSDIKKETTDVTEQGTNEVQEQDKIEIKCEVVDEENPPSSDDEIWIVQTADVEATDQLQKLLDAAKGVEGEKSASKKTPKCLNCSQTFPSLEALATHRCRRRGRKRKSVGNDGTICVPTQEDFIKRAQGRPRQTDITSGGNSLLVPKTRKKKSKEPSSDPQIVTCDNCNESFTSKVRLKFHMQFHESTQMMTPEGRFSCVDCEDAVFDTETALFDHVHFQHDKQKRWQCPVHGCGKTFHLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDAQHAQEHATKFPECIETFANDLKVEEAEEATVQLSPTSGIVRHTVQILESPKLSKPIPRQVDSPLAAPLLAQVTDEARSIIRVVEIEKAFRCEYCEDVFYLEDSLNNHRVIHKGVRNPFTCHICKVSFATYSRVTTHKTTHGFYKRSLAPARAAAGLAAPAAAAILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENYTYACNQCELTFPNSWSVGHHRKKVHGKSAPDDPTAIAPKEARTNYRIPCRDCDEVLPSKTALYKHRKKEHSNISCRPGVFCCGTCGKQYSSRAALEAHALTHASQHCDNYEQPAAAHKQLRGSGQRARRRHAHSLAVLEIEGLNHTQEEIMKILSNHSISHDRVVEITKISFAQGTSSIIPDSSRALSLLSDVPRTQITCVKPSDRIEDDFQSLRRNRILSKSRPKILQRGAEDRTPADCNNYPLAVSVTGEELSDLNVQLLLRDGVLVDGNQMVQLQLNDSMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00291020;
90% Identity: iTF_00428483;
80% Identity: -