Basic Information

Insect: Deilephila porcellus
Gene Symbol: -
Assembly: GCA_905220455.1
Location: LR999973.1:14004777-14014961[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.00012 0.0086 16.9 3.6 1 23 187 209 187 209 0.99

2 29 0.00097 0.072 14.0 0.7 1 23 299 321 299 321 0.98

3 29 0.00052 0.039 14.8 0.9 2 21 346 365 345 366 0.94

4 29 5.2e-05 0.0039 18.0 0.2 2 23 397 419 396 419 0.96

5 29 0.0046 0.34 11.8 0.4 2 23 507 528 506 528 0.95

6 29 0.005 0.37 11.7 0.7 2 21 552 571 551 572 0.93

7 29 0.00018 0.013 16.3 3.6 2 23 611 633 611 633 0.97

8 29 0.0042 0.31 12.0 0.5 3 20 679 696 677 698 0.92

9 29 0.012 0.88 10.5 1.1 2 23 732 754 732 754 0.97

10 29 0.00018 0.013 16.3 0.2 1 23 804 827 804 827 0.97

11 29 2.9 2.2e+02 3.0 2.5 1 20 885 904 885 907 0.88

12 29 0.00016 0.012 16.4 3.0 1 23 918 940 918 940 0.99

13 29 0.94 70 4.6 0.2 2 23 952 973 951 973 0.92

14 29 0.0093 0.69 10.9 0.5 1 23 983 1005 983 1005 0.97

15 29 0.0054 0.4 11.6 1.8 1 23 1031 1053 1031 1053 0.96

16 29 0.00029 0.022 15.6 3.3 1 23 1064 1086 1064 1086 0.98

17 29 0.00032 0.024 15.5 4.2 1 23 1094 1116 1094 1116 0.99

18 29 0.0015 0.11 13.3 0.3 2 23 1136 1158 1135 1158 0.97

19 29 0.7 52 5.0 4.1 1 23 1205 1227 1205 1227 0.97

20 29 0.0028 0.21 12.5 0.6 2 23 1238 1260 1237 1260 0.95

21 29 0.0069 0.51 11.3 0.2 2 23 1283 1304 1282 1304 0.95

22 29 0.52 39 5.4 0.6 2 20 1308 1326 1307 1328 0.92

23 29 0.0073 0.54 11.2 0.2 2 23 1385 1406 1384 1406 0.95

24 29 0.01 0.77 10.7 2.2 3 23 1414 1434 1412 1434 0.96

25 29 0.0087 0.64 11.0 1.6 2 23 1445 1467 1444 1467 0.95

26 29 0.84 62 4.7 4.3 2 23 1484 1502 1484 1502 0.90

27 29 0.98 72 4.5 1.4 2 22 1506 1526 1506 1526 0.92

28 29 0.12 9 7.4 1.3 2 23 1575 1596 1574 1596 0.95

29 29 0.00073 0.054 14.4 0.5 2 23 1607 1629 1606 1629 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.00012	0.0086	16.9	3.6	1	23	187	209	187	209	0.99
2	29	0.00097	0.072	14.0	0.7	1	23	299	321	299	321	0.98
3	29	0.00052	0.039	14.8	0.9	2	21	346	365	345	366	0.94
4	29	5.2e-05	0.0039	18.0	0.2	2	23	397	419	396	419	0.96
5	29	0.0046	0.34	11.8	0.4	2	23	507	528	506	528	0.95
6	29	0.005	0.37	11.7	0.7	2	21	552	571	551	572	0.93
7	29	0.00018	0.013	16.3	3.6	2	23	611	633	611	633	0.97
8	29	0.0042	0.31	12.0	0.5	3	20	679	696	677	698	0.92
9	29	0.012	0.88	10.5	1.1	2	23	732	754	732	754	0.97
10	29	0.00018	0.013	16.3	0.2	1	23	804	827	804	827	0.97
11	29	2.9	2.2e+02	3.0	2.5	1	20	885	904	885	907	0.88
12	29	0.00016	0.012	16.4	3.0	1	23	918	940	918	940	0.99
13	29	0.94	70	4.6	0.2	2	23	952	973	951	973	0.92
14	29	0.0093	0.69	10.9	0.5	1	23	983	1005	983	1005	0.97
15	29	0.0054	0.4	11.6	1.8	1	23	1031	1053	1031	1053	0.96
16	29	0.00029	0.022	15.6	3.3	1	23	1064	1086	1064	1086	0.98
17	29	0.00032	0.024	15.5	4.2	1	23	1094	1116	1094	1116	0.99
18	29	0.0015	0.11	13.3	0.3	2	23	1136	1158	1135	1158	0.97
19	29	0.7	52	5.0	4.1	1	23	1205	1227	1205	1227	0.97
20	29	0.0028	0.21	12.5	0.6	2	23	1238	1260	1237	1260	0.95
21	29	0.0069	0.51	11.3	0.2	2	23	1283	1304	1282	1304	0.95
22	29	0.52	39	5.4	0.6	2	20	1308	1326	1307	1328	0.92
23	29	0.0073	0.54	11.2	0.2	2	23	1385	1406	1384	1406	0.95
24	29	0.01	0.77	10.7	2.2	3	23	1414	1434	1412	1434	0.96
25	29	0.0087	0.64	11.0	1.6	2	23	1445	1467	1444	1467	0.95
26	29	0.84	62	4.7	4.3	2	23	1484	1502	1484	1502	0.90
27	29	0.98	72	4.5	1.4	2	22	1506	1526	1506	1526	0.92
28	29	0.12	9	7.4	1.3	2	23	1575	1596	1574	1596	0.95
29	29	0.00073	0.054	14.4	0.5	2	23	1607	1629	1606	1629	0.97

Sequence Information

Coding Sequence: ATGGCCCTTGAACTCGGGAAATGCAGATTATGCCTCAAATTAGGAGATTTCTACTCCATATTCACAGTGGACAATGGGATCCCGCTGTCGGAGATGGTTATGGAATGTTCGCGAGTGAAAATATATGAAGGAGATGGACTGCCAGATAAAGTGTGCTCGGAATGTATTCAAAAACTCAGCAGTGCATACATCTTCAAACAGCAGTGCGAGAGAGCTGATCAGGACTTGCGACGCAACTATGTACCGCCTCCAGGTTTCTGTCCGATATCACCAAACAGACAGAGCAGCGACTCTGCATTTTCCACCCACACGGATTATTCCAACTTGAACAAATCCACAGAAGGCAAGGTAACCCCTGCCAGCTCTGCTAGAAAGAGACGAACCGAGAGCGATGACACTTCCACCGCTAGCCGCCACGACTACCGCTCTGACTCCAAACACGCCGATATCAAGAGACAGGTGAAGAAACCCAAATATCTTAATAACTCCATGGACTCGGATGATGATAACAATGACAGCTTCACGGCGGATAACGAACCCAATGAACCTACAAACGAATTTAAATGTACCAAATGTCCTAAATCATTCAAATCTTTGTGTGCCGTGAACTCTCACCAGCGTGTTCATAGGAATGATAGATCGTTGGAAAACATTGTAACGCCCACCAGTACTCCACTGGGACGCAGTATCGAGAGCGACAATGCGTCTTCAAGCAGCAAGCAGGACTATTCGGGAAGCAATAAACGCGTCATCGAACTTAGGAGATTGGGCAGTGCGGGTAAACGGAACATGAATGCTTCATCAATGGACACAGACGATGATGACAACGAAGACTCGAGCTTTAGAAGCGAGACAGCCGCCACGGACTCAGACGAATCGGCAGCTAAAACAGTGTTCAAATGCCAACAGTGCCCTAACGAGTACGCTACACTTCGTAGTCTAACCATGCACATGAGGCTCCATAAGCGACAGAATATGAAAGAAGAAGCGTCTGAAGATTCAGCGACTGCTGAGCCGCAAGAAGAAGATGATCTAAGTTGTAATAAGTGTGGCAAGACTTATAAATTGAAAATAATGTTGAAGCGTCACCAACAGAACTGTAAAGAGACGCCCGCTGTAGAACCCACTCCACAGAAAGAACTCCTGGTGTGTCTCGAACCAGTTGATGGAAAGCACAAAGTGAAGGTCGAGTGTGAGATTTGTACTGCCAAATTCAAGACTGTTGATAACCTAAATAAGCATCTAAGGGTAGTGCATGCTGCAGCCCCTAAAAGAGTTTCTGCGAGACTGGTAGGAAATGTATCAGTTCCTTGCATTTATTGCCAAGAATCCTTCGACGATTATTACGTTCACAGTGCTCATTTCAACACATGCCCCAAGCGCGATGACCGCAACACTTTCAAGTGTCCTTTATGTCTAGTGATTTCGTTCAAGAAGATGGCGTATTTTGGTCATATAAAGAATTCACATTTCGAGCCGGAGACCCGAGAACAGGCCGATTTCAAAGAAGACGAGCTTAAATGTAGTTTCTGCAATAAAAGGCTCGCAAACCAGCAGCAGTTGATCACGCATTTGGCAGCTCATGTCTCTAATATTGATGAAGCCGGTGTGAACGAGGATACCAGAACACCGACAGACACACCAGGCTTATCCTACTGCAAGTACTGCCAGAAGGAGTTCAAATACAAAGGCGCTATGCTGTCACATCAGAACTCCTGCGTCACACAGACGAAAGGGAAGAGTGAAGTGAAACTTGAACTGCAAAAAGTCCTAGAGGGATCCAGCCAGCACTGTGTCGAGGAGGAATCAAGTCAGGACGATTTTGACAATACTTGTGATATATGCGACAAACAGTTTTCGTACAAAGGACAGCTGTTGCACCACAAGAAAACTAAACATAATATGACAGGGAATAAGAGTGCGGTTGTCTCTAACTTGTCTGCGAATGTCTCGACCCTCGATGAAACGGCTTTGAACGACGAGTCCAGAGTATCAATAGCAAACACATCAACAAACTCAACGGGCGCAATGAACTGCACTTACTGCCAAAAAGACTTCAAATACAAACGATCATTGGCCAACCATGAGGCCACATGCTCCAAGAAGGACGAAGCCCCCGAACAGGCAATGAACGAGGAACCAAACAACCAATCAGATGAAGAGGACTCGAGCCCAGACGAGAACTATGATAACACATGTGACATCTGTGAGAAGCAGTTCTCATACAAAGCTATATTACTGCAACATAAAAGGACGAAGCATAACATGTGCTCGGGGACCAAACGTGCCAGCATTACCCTCAATGACTGCGGAGCCAAGTGCCTGATATGTGACGAGGACATGAAAGTGAAGGATATATATGAACACAATAAGAAACATATCGCTATGAATATGAAGCCGAGGAATATTTATACTTGTGGTGTGTGTGGAAACTTCTTTAAGAACCGAGCGGCTCTAGCTACCCACATTAAGTATGTGCACAGATTAAAAAAGGAAACACCGATTGCTCAGAAATTGCAAAGCATAGATCCGGCGGCGTTTTGCGAGGTGATAGTGGCCAAGACGGAGCCTCAGGACTGGCCTCAAGACACCAGCGAATTTAATTCAGTACCAGACAGCGTGGTGAAGATAGAAGCCCCAGTGGCAGGGGGCTTTGTGTGCCCCACTTGTGGGAAGAACATGCCGTCGTCCATGTCGCTGAAGTGTCACATGGCGTGCCACAGGAGGTATGCAGGCGTTGCCGGCGGGCGATATGAGTGCTTCGTGTGTAAGGAGGTGTTCAGGTTCCAAGTGCACTACAAGCTGCACATGCGCATTCACTACAACGACCCCAACCTGGACGCCAAGCACCTCACCTGCCCCATCTGCAACCGCAAGAACAAGAACCTGCGCGCCGCCCGCGCGCACATGGCCTTCCACCAGCAGACGCGCTTCCAGGTCAAGGACTACCAGTGCTCGCTCTGCAAGCGCGTCTTCCAGAAGCGCGGCGTCTACCTCGCGCACATGGCCAACCACCAGAAGCGAGGCGACACCGGCAAGAACGTCGGCTCCAGCAACGACTCATTCAACAAAGGCTTGCTGGACGGCACTTACACCTGTGAGTTGTGTGGTAAAGCCTGCGACTCGGAACTATCCCTCAAGCACCACACCATCTGGCACAACTCCAAGGGCTCGCTGTACGCCGCGCGCCACGAGTGCGACATCTGCAAACTGCAGTTCACCAACAAGAAAACGCTCACCCTACACGTACGCAAGCACTACGAAAACGAAAACGGACCCTTCAAGTGCCATCTCTGCAGCAAAGGCTTCACCGAGGAGGAGTATTATCGCAGACATCTAAGGTCGCACAACTTCGACCACTCCGCACACAAGAGGCGGATAGAGAGGCTGCGGATGAATCAAGTCAAGTGCCCGATATGCACGCGGTACTATCCAGATTTGGTGAAGCTCATACGACACTTGAAGCGGACGCATCCGGATAGCAAGATGATAAAAGCGGATCCTGACGCGCCGCCGCAACGATACTACCCCTGCCAGCTGTGCGCTAAAGTGTTTCTAGACGAGCGACGACTGCAGTTCCATAAGGAAGCTCATCTAAGAAAACCAGTGTTTTATAAGTGCAAGTTTTGTGGAAAGAACACCATGTCACTTAAGAGCCATAACATTCATATTAAGTCTCATTTGTGCACGAAGCACATAGATGATCCGCTAAAATGTCCGAACTGTGACGAAACATTTATAAAAGGCTACGACCTCCACTACCACCTGCGCGATGTCCATAATATCAATGAGACGTGGATTGCCCCGAGAACGGCGACTGACCTGAATGTACCGCTCCAAGACCTGCAGTGCTCCGTGTGCCTGAAAATATTAGCAAGCAAAGGAAACTTCCAGAGACACATCGACTACCACAACTCGCTTAGATGCAACTACTGCTTTGAATACTTCAGCTCGCTCCGCTTTCTCGAAGGCCATCTTTCGTTTATGTGCGAGAAAAAGAAATTAATAGGCAATACAGAAATACACCCAAAGCGAGTGAAATGCCACATATGTTACAAAGCATTCCATCTGCAAGTGAAACTTGATTGTCATCTTTTTACGCAGCATGGTATAGCCATCAATAAAGAAGCGTCCGCGAGCAAGCAAGAGATTGTTTGTGACTACTGCTTTAAAATATTTGAGAACGAATACGCACTGAGCACGCACAAAATATATCACAGAACCGTCGGCTTTTACGGTTGTAAGTATTGCGCTAAAAAGTTTAATACGCTAACGTCCTATAGAAAACATAAAAACGCTCACTTTGCCGTATTAAATGTTGATAATCCCACCAAATGCGAGCATTGTGAGGAGAGATTTGTGTCGTTCAGAGACATGATAACTCACATGAAGGACGAACACGGAGACAATAGCGAGTGGTTTATAGAACCGAAAGATTCCATAGAGGAAACATGTAACATCTGCAACAAAACATTCTTTAACCTGCACAAACATTTGTCGTACCACGAAGAGAACAGATGCAAGAAATGCGGCGAATACTTCTTTTCAGTGGTTGATTTCGACAACCATCTGTGCACCATAGAAAGTGACGACGAAGAAAACGCAACTTGCAATGGCGACGCCGGCGCTGCATACGAAGAGTGTAACTTCTGTTTCAAGCCCATCACTACCACTAACTCCAAGTTGAAGCACGACAAAATCCACAGGAGCTCCGGCTCGATATCGTGCCGCTTCTGCCGCAGGAAATTTAAAACTATCGACGCTTTCAACATACACGCATTCACCCACCGAAGCAGAAAGTATAACAAGAAGCCGATAAAATGTCGTAAGTGCGGCGAGAAATTTGTGAAATACGGGCCATTTATAAAGCACATGAGATCAGCGCATAAGCTGGCGTTGAAACTGCATTATCGAGCGATTGTGAAGTCGGAGAGATGCGTGGTGTGCGGAGACGAATTTCCGAACCTGCACAATCACTATCGAGCTCACCTGCTGAACCAGTGCCAACAGTGCCGCAAGTACTTCACATCATACAAAATATTTAATGCACACGAATGCGACAAAGAGGACAGTGACCCATCCAAAGTGTTCAATTGTGACCAAGATCTGATAGCTCTGATAAACTCATACGAGCCGAAGGACGAGAAGAGTGGCGAGAGACTGTATGGAGACAGTGATGAAGAAGACATGGCGGAGAATGAGGAGTTAGAGGACAAAGAATATTCACAGGAATACCACCAGGATAGCCAGGATAGTGAGGATGTGAAGAAGTTTGAGACATTCCAGGCGCCCGTCATATCTGACGTACTGTCTCTGTGCCAGACGGAGGAGAACAGTCAGGACGCTGACGTCAGCAAGCCAGCTGACGCTAATGTGTTCGTCATCAGCAGTGATGAGGAGGAAGAGCCTACTGACGTTATTCCACGTCCCTCCCGCGTTGTTGTGGTAGATTGA
Protein Sequence: MALELGKCRLCLKLGDFYSIFTVDNGIPLSEMVMECSRVKIYEGDGLPDKVCSECIQKLSSAYIFKQQCERADQDLRRNYVPPPGFCPISPNRQSSDSAFSTHTDYSNLNKSTEGKVTPASSARKRRTESDDTSTASRHDYRSDSKHADIKRQVKKPKYLNNSMDSDDDNNDSFTADNEPNEPTNEFKCTKCPKSFKSLCAVNSHQRVHRNDRSLENIVTPTSTPLGRSIESDNASSSSKQDYSGSNKRVIELRRLGSAGKRNMNASSMDTDDDDNEDSSFRSETAATDSDESAAKTVFKCQQCPNEYATLRSLTMHMRLHKRQNMKEEASEDSATAEPQEEDDLSCNKCGKTYKLKIMLKRHQQNCKETPAVEPTPQKELLVCLEPVDGKHKVKVECEICTAKFKTVDNLNKHLRVVHAAAPKRVSARLVGNVSVPCIYCQESFDDYYVHSAHFNTCPKRDDRNTFKCPLCLVISFKKMAYFGHIKNSHFEPETREQADFKEDELKCSFCNKRLANQQQLITHLAAHVSNIDEAGVNEDTRTPTDTPGLSYCKYCQKEFKYKGAMLSHQNSCVTQTKGKSEVKLELQKVLEGSSQHCVEEESSQDDFDNTCDICDKQFSYKGQLLHHKKTKHNMTGNKSAVVSNLSANVSTLDETALNDESRVSIANTSTNSTGAMNCTYCQKDFKYKRSLANHEATCSKKDEAPEQAMNEEPNNQSDEEDSSPDENYDNTCDICEKQFSYKAILLQHKRTKHNMCSGTKRASITLNDCGAKCLICDEDMKVKDIYEHNKKHIAMNMKPRNIYTCGVCGNFFKNRAALATHIKYVHRLKKETPIAQKLQSIDPAAFCEVIVAKTEPQDWPQDTSEFNSVPDSVVKIEAPVAGGFVCPTCGKNMPSSMSLKCHMACHRRYAGVAGGRYECFVCKEVFRFQVHYKLHMRIHYNDPNLDAKHLTCPICNRKNKNLRAARAHMAFHQQTRFQVKDYQCSLCKRVFQKRGVYLAHMANHQKRGDTGKNVGSSNDSFNKGLLDGTYTCELCGKACDSELSLKHHTIWHNSKGSLYAARHECDICKLQFTNKKTLTLHVRKHYENENGPFKCHLCSKGFTEEEYYRRHLRSHNFDHSAHKRRIERLRMNQVKCPICTRYYPDLVKLIRHLKRTHPDSKMIKADPDAPPQRYYPCQLCAKVFLDERRLQFHKEAHLRKPVFYKCKFCGKNTMSLKSHNIHIKSHLCTKHIDDPLKCPNCDETFIKGYDLHYHLRDVHNINETWIAPRTATDLNVPLQDLQCSVCLKILASKGNFQRHIDYHNSLRCNYCFEYFSSLRFLEGHLSFMCEKKKLIGNTEIHPKRVKCHICYKAFHLQVKLDCHLFTQHGIAINKEASASKQEIVCDYCFKIFENEYALSTHKIYHRTVGFYGCKYCAKKFNTLTSYRKHKNAHFAVLNVDNPTKCEHCEERFVSFRDMITHMKDEHGDNSEWFIEPKDSIEETCNICNKTFFNLHKHLSYHEENRCKKCGEYFFSVVDFDNHLCTIESDDEENATCNGDAGAAYEECNFCFKPITTTNSKLKHDKIHRSSGSISCRFCRRKFKTIDAFNIHAFTHRSRKYNKKPIKCRKCGEKFVKYGPFIKHMRSAHKLALKLHYRAIVKSERCVVCGDEFPNLHNHYRAHLLNQCQQCRKYFTSYKIFNAHECDKEDSDPSKVFNCDQDLIALINSYEPKDEKSGERLYGDSDEEDMAENEELEDKEYSQEYHQDSQDSEDVKKFETFQAPVISDVLSLCQTEENSQDADVSKPADANVFVISSDEEEEPTDVIPRPSRVVVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820323;
90% Identity: iTF_00819397;
80% Identity: -