Dpor002170.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- ZFY
- Assembly
- GCA_905220455.1
- Location
- LR999971.1:20202697-20209175[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00051 0.038 14.8 0.1 2 21 114 133 113 134 0.95 2 23 0.012 0.9 10.5 0.7 1 23 164 186 164 186 0.97 3 23 0.00035 0.026 15.3 3.2 1 23 190 212 190 212 0.95 4 23 0.0076 0.56 11.2 1.0 3 20 217 234 216 236 0.92 5 23 0.006 0.44 11.5 0.6 1 23 249 272 249 272 0.95 6 23 6.5e-05 0.0049 17.7 2.3 1 23 278 300 278 300 0.97 7 23 0.063 4.7 8.3 2.8 1 23 307 329 307 329 0.98 8 23 8.9e-05 0.0066 17.2 1.5 2 21 445 464 444 465 0.93 9 23 0.071 5.3 8.1 2.2 3 23 471 491 470 491 0.89 10 23 6.6 4.9e+02 1.9 3.0 3 23 498 519 498 519 0.93 11 23 0.013 0.94 10.5 2.7 1 23 524 546 524 546 0.96 12 23 0.58 43 5.2 10.2 1 21 549 569 549 570 0.95 13 23 0.00024 0.018 15.9 0.2 1 23 582 605 582 605 0.95 14 23 9.3e-06 0.00069 20.3 2.7 1 23 611 633 611 633 0.99 15 23 0.0018 0.13 13.2 1.0 2 21 816 835 815 836 0.92 16 23 0.17 12 6.9 0.5 3 23 871 892 870 892 0.96 17 23 0.00033 0.025 15.4 1.5 2 23 898 919 897 919 0.96 18 23 0.26 19 6.3 1.2 2 20 923 941 923 942 0.94 19 23 9.1e-07 6.7e-05 23.5 0.4 1 23 969 992 969 992 0.96 20 23 0.00041 0.03 15.2 0.5 1 23 998 1020 998 1020 0.95 21 23 0.071 5.2 8.1 0.1 1 23 1026 1048 1026 1048 0.97 22 23 0.005 0.37 11.7 0.3 1 23 1054 1077 1054 1077 0.94 23 23 0.00031 0.023 15.5 2.7 2 23 1084 1106 1083 1106 0.95
Sequence Information
- Coding Sequence
- ATGGGGGTGGAGACGAGCTCTGTGCTGCCAAAACAATTGTGCAAACGCTGCGTAGCGCACATAACTGCCTTCATCCCATTCATGCTCTTATGCAAGGAGTCAGCGCAGCAGTGGAACCAAATCACCAAGATGTTTGATGATGTAAAAGTTCCCAAAAACGCCAGAAGTTATTATGTATTGGCCCTTAAAGATAAACAAAGTTATTCCAGTACTAAAACAGCGGATAACCCAAAGGAAGCATTGGCTATTTTAAAATCAAAAATAATTTACCGGCAGGACTATCGTAAGCGACTAGCTAAAGAAATCCTGATATCTCAATCGCGGAATAAGCCGAATATGACATGTCCCGAATGCGATACAACGTACACAAACATTAAAAACTATAATGCACACATAAAAAACGTGAGGCGGAAGATGTGTGTGATTTGTAATGATTTGGTAGATCTGGATTTGTACAAGAAACATTTGAAATCACATATTTCTACAGTTTACCCTTGTCATTCCTGTCCGGAAGTATTCTTAAGAGAAACATCTCTGAAGGTTCACTACGCAAAACACAAAGGCGACCACGTCTGCTTGGAATGTAAATATAGTTTCCACACTTCCTCTAATTTAGCAACGCATATGGTGCAACATCAAAGTAGAATCTGCGCCGGGTGTGACAAAAAGTTTAGCAACAAAATGTGCTACATGAGGCATAAGGCGATGTGTTCAACTGTGCAAGATAATCAGAAACCACGTAAATATATTTGTGACTATTGTTCCAAAGAATACAGCAAAAGGGATTCAATAATGTTACACATAAGCAACACCCATTTGAAGGGGTATCAATACCAATGCGACCAGTGTGGCAAGACGTTCCAGAGCCGCTTCCACTTGGCCGAGCACAACAACATCCATAACAAAGTCAGCGACCGATACGTCTGCGCAACATGCGGTGCCAAGTTCAGCACCAGGCGAGGCCATGAGAGGCATAAAAAAAAACACGAGAATGGCGACCAAGACGTGGCCGAGGAACCCGCCCTGCCGCAGGGACTCTGCAGAGCCTGCTTCGAACACACCCTCGCAGCCGTCCACTACAAGCGGCTGTGCCTTCAGTCCAATCAACACTGGAAGGAGGCCACCTCTTACTTGTCACAAGTGCACTACCCCGCAGACGAGGACAAAACCTTTTACATATTTTACAATGAAGGCTTGACTATTGTCAAGGACCAGATTGATAGTGTACCGAACACATGTGAGGCTTTGAAGAAGCTCAACGGTATGTTTCAAGAACCGAAGTGGGAAAGACCTCGCAAGAGAACCAAGCGTTGGAGCACCCCGATAAGTTGTTACTGCCCTGATTGTGACAAGACCTTTACAAATACTGAACTTTTAAATTATCACCTGAAAAACTCTTTGAAACGCGCTTGTCACTTGTGCGGAGTCGTCTTCTCCAAGAACTCATTACACAAACATTTAGCGGATAAACATAAGGTGTCATTGTTAGGGTGCCAAACTTGTAACAGCCTGTTTGAGAGCCAGCACTTGTTGGAGCAGCACTCGACCAGGTTCCACGGCCCCAATACACACTCGTGTCAATTTTGCGGTAACGGATTCATCAACCACAGGGCTTTGCGCGCTCATCTATACTCGCACACGTTGTTTCATTGTAAATCTTGTAAAAAGAGTTTTGAAAACCGCGCTTGCTTTAAGCATCACCAGAAACATTGCAAGAAGACGGATGATCCTAAGCCAGAAGTGTACATATGTGACTATTGCAACATCGAGTACTCCAGAAAGCCGTCATTGCGAATACACATTATTCAAAAACACTTGAATATATTGCCTTACGTCTGTCAGCAATGCGGGAAGAGAACGTCGACAATGGCTCACCTGAAATCTCACCTACGGACGCACAACACAGTTCGCAAGGTGTACCAGTGCTACTGCGGAGCCAAGATGCGCACCGAACTGGGATACCAACTGCATCAACGCATACATTCGGGAGAGAAACCGTATCAATGCGACGCTTGCGGGGATCGCTTCTTGTCCGCTTCGAGAAGGCTGGATCATATAAAAAGAAGGCACAGAAGCACTAACGATATGCAGCACGCCTGTGACAAGTGTTCCGCGAGGTTTATCAAAGAAGAGACTCTATGCCCGAACGGTGCATGCGTCACCTGCGCCAGCACGGCCCTGGCGGCTCAGGAGTTCAGGTACTTCGTGCAATCCTCTCAGAAACTGTGGGGAAAAGCCATCACCGGCATCTCAGGACTCCCCGTGGCGTCGGTCCCTCCCGCAAAGTCGCTGTGTGTCTTCATCAGGCCCAACGATTTCAGCATACAAACGGTAAAAAACTACGCGGAAGGAGACGCTAAAACGGTAATGAATAGGCTCAAAGCGGGGATATCTAGAAAGCCATTTGGGCGCAAGCCGCGGACCGACCGCACCGGCCCGACGTGCGACTGTCCGGACTGCGGCAAGACCTTCCTGAGCCCACACTACTTGAATATGCACCTCATGAACAGTGGACAGAAGGAAGCTTGCGCTCTATGCGGCGCCGTGGTGCTTCGAGGCCGGAAGATGAAAGAGCATATGAATTCTGTACACAAAATGGACTTGACCCTGTGCAGTGAATGTCCTTTGTTGTTCTCGAGCGAAGCAGAACTACTTATACATTCGAATAAGTGCCACAAACCCGGTTCTTTAACATGTAGTGATTGCGGAAGGACATTCCCAAGAAAAATAACGTTCGACCATCACGCACAAATGCACATGGTGAGAACTTGCCGCACGTGCGGCGCACAGTTCACGAACCGCGGGTGCTACCGGGAGCACCGCGTCCAGTGCGAGCCCGACGCCAAGCCCTGCATCACCACCGTGTCGCGCGCGCGCCGCTCCAACATCCGCGACCCCGCCACCTACACGTGCGACTACTGCGGCAAGACCTACTCCTCGCGACCGCAACTCAAGAACCACATCCTCTGGATACACATGGACGTGCGGCCGCACCAGTGCCAGTGGTGCGGCAAGCGCTTCTACACGCCGGCCCGCCTCGCCGAGCACACCGTGGTCCACACTCGCGTCAGGAACTTTGAATGTGACATTTGTGGTGCTAAATTAGTGACAAAAATGGCAGCCATTTACCACAAGCGGCGGCACACGGGTGAGCGCCCTTATAAATGTGAAGATTGTGGTGAAGGATTCATATCGGCCTCGCGTCGGTCGGAGCACGCGAAGCGGAAGCACAATAAAGGAACAAAGTTGCAGTGCCAGTTCTGTCCGGCTAGCTTTGTGCGCAAACACGAGCTGAAGAAGCACCGGGAAAAGAACCACGGCATGCAAGAGCTAACCTTCAAAACCGAAGTAGAGTAG
- Protein Sequence
- MGVETSSVLPKQLCKRCVAHITAFIPFMLLCKESAQQWNQITKMFDDVKVPKNARSYYVLALKDKQSYSSTKTADNPKEALAILKSKIIYRQDYRKRLAKEILISQSRNKPNMTCPECDTTYTNIKNYNAHIKNVRRKMCVICNDLVDLDLYKKHLKSHISTVYPCHSCPEVFLRETSLKVHYAKHKGDHVCLECKYSFHTSSNLATHMVQHQSRICAGCDKKFSNKMCYMRHKAMCSTVQDNQKPRKYICDYCSKEYSKRDSIMLHISNTHLKGYQYQCDQCGKTFQSRFHLAEHNNIHNKVSDRYVCATCGAKFSTRRGHERHKKKHENGDQDVAEEPALPQGLCRACFEHTLAAVHYKRLCLQSNQHWKEATSYLSQVHYPADEDKTFYIFYNEGLTIVKDQIDSVPNTCEALKKLNGMFQEPKWERPRKRTKRWSTPISCYCPDCDKTFTNTELLNYHLKNSLKRACHLCGVVFSKNSLHKHLADKHKVSLLGCQTCNSLFESQHLLEQHSTRFHGPNTHSCQFCGNGFINHRALRAHLYSHTLFHCKSCKKSFENRACFKHHQKHCKKTDDPKPEVYICDYCNIEYSRKPSLRIHIIQKHLNILPYVCQQCGKRTSTMAHLKSHLRTHNTVRKVYQCYCGAKMRTELGYQLHQRIHSGEKPYQCDACGDRFLSASRRLDHIKRRHRSTNDMQHACDKCSARFIKEETLCPNGACVTCASTALAAQEFRYFVQSSQKLWGKAITGISGLPVASVPPAKSLCVFIRPNDFSIQTVKNYAEGDAKTVMNRLKAGISRKPFGRKPRTDRTGPTCDCPDCGKTFLSPHYLNMHLMNSGQKEACALCGAVVLRGRKMKEHMNSVHKMDLTLCSECPLLFSSEAELLIHSNKCHKPGSLTCSDCGRTFPRKITFDHHAQMHMVRTCRTCGAQFTNRGCYREHRVQCEPDAKPCITTVSRARRSNIRDPATYTCDYCGKTYSSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVTKMAAIYHKRRHTGERPYKCEDCGEGFISASRRSEHAKRKHNKGTKLQCQFCPASFVRKHELKKHREKNHGMQELTFKTEVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819395;
- 90% Identity
- -
- 80% Identity
- -