Basic Information

Gene Symbol
-
Assembly
GCA_905220455.1
Location
LR999994.1:4163542-4168192[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.03 37 4.9 0.0 1 13 73 85 73 91 0.87
2 7 2.2 2.8e+03 -1.1 0.0 11 31 207 237 205 240 0.73
3 7 0.049 62 4.2 0.0 23 45 342 363 334 364 0.87
4 7 0.34 4.3e+02 1.5 0.0 22 43 439 459 409 462 0.74
5 7 0.0011 1.4 9.5 0.2 22 46 570 604 558 604 0.74
6 7 0.005 6.2 7.4 0.0 3 45 654 705 652 706 0.78
7 7 7.3 9.2e+03 -2.7 0.1 23 39 841 856 829 857 0.81

Sequence Information

Coding Sequence
ATGGAACAAGTAGTAGTGAAAACGGAGATGCAAAACAATGGGGAGATATTACTGTTCTATGTGGATGAGAATGGAGAAAATGAGGAAGGTGTCTTAACAACTGTTGAGAATATAGAAAACCCTGACATGCAGTTAGACCACAGCAATTCATACATCATTGAAGAAAACGCCGAGGTGTCCTATGAAGTACCTCAGTCCCAAGACTTTTCAGTGTCTAGGGACCGCTGGACCGATGAAGAAATGCAAAGGCTTCTGGTCTTCTATAATGACAACAAACAGACTTTTCTCACTGGCTCGACTAAAAGAAGGCATTTGTGGGCTGTAGCGTGCAAGACCATGCTAATGAACAAAAACCCCACATCTTGCGACATGAAGTTAAGGAAGTTGAAGGCTAAATATGTTGAAATATGCAAAAACAAACACCGAACTGGTGAAATAAGTGATCAATTATTTGATCGATGTCATCAAGCGTTTAGTGATGATCCACATTTAAAATTTTTGGTCGAATCCACAAGTGAAGAGAGAGAAATTAAACTTCCTATAGCACAACAACCTAATGATGGTATAGTGGTTCTCAAAAAAGTTAATACCCACAAATCAACAGATTCGAAGGTTGAAATGTTGCTACAATTGTACATGAAGTATAAAAAGAGCTTTCGAAAAGAATATTTTACAAGGAATTTGTGGGAGACAATTGCTCTAGAATTAGGTACAGAAGACGGATTGTACTGGCAAAAACGCTTTCTGAACTTCAAACAACATTACATCAGTATGCTTGAGAAAAGAAAAGATGGCATTTGTGAAATCAATTGGCCATACATGAAACACTTTGATGAAATATTTAAAGATGATGAAGATTTTCGAAGAAAGTATCCCTTTATTCAAGAAGAAATTATGCCTGAAGAAATAGTACAGACAAGTCATGACCACGATTGGTTGGAGACTGAGAAAATGGTGCTAGTCAAATACAACTACGACTGCTTTGAAGATTTTCAAGATCCGAAGATCCCCAATAGTTTCCTATGGACTGAAATTGGAAGACTTCTTGATAAAAGTCCTGAGGTTTGCAAAGATAAATACTTTGAATTAAAACAGGAACATTATATCAAGTATTTGGAAGGAGGATACGATCTTCGTGAGCGAAAGCCTCTGGATATCGTACTGGACTATATTATATCCAAGGAAACTGAACTTGAACTGAGCAAGAGCTACATCAGTGAATCTGGTATTTGGAAAACTGAAGAGATTGATGAAATTGCGCAGTTTTTGTATGACAATGTTGAGATGTTTAAAGATCCAATATGCTATTTTGTTTGTTGGGGTATAGTTAGTATGAAGCTGAAACGGCCTGTAGGCAGTTGTAGGCAGCAATGGGAAGAACTTGTTACTCTATACAAAAGCATTCTTGATGATAAGAAAGAAAATCCTGATATGCAAATTGACTGGAGGTATATAGAGCTGTTTGACAGAATATTTGATTATGGTATGGACACCAATCTGTTAAATGGTTATGAGAAACCTAAAGAAATAATGGATGACAAGGCTGGCGTGAAAAGAGTGAGTATCAACTTGAATGATATGAAAACGGAGAATGGCACGGATGATGACGAATCATTCGATGAGAGAGGGTTTCCGAAACGTTCTAGAAGTTCATCCGGAGATTCTAAAGCTTTCAAAATCCTCGAATACTACCAAAAGAACAAAGACAAATTCTCAACTACCAACAGAAATAAACACAGCCTTTGGGAAGTTCTAGCTAAGCAAATAGGCATTACTGCCACTCAATGCGCTCACAGATTTAGAAATCTCAAGCAAGTGTACACAGCATACGTACAAAGAGAGATAAACAAACCAGAAATGCCAATAGTATGGCCATACTACGCTTTGTGCAAGAAAGTCTTCGGCTACCGAGCAATAAAAGCCAAACTGAAGAATGGTAAAAATGATTCAGACACCGAGGAATGGTCTGCTAAAGAAATAAACAAATTGATTGGTTATTTTGCACAGAATTTCGATGAAATATCAAATAATGTTGATGATATGAGCAGATGGACTGCGTTGGCAAGCGACTTGGACAAATCTGAGGTGGCTTGTAAGGACAAGTTTATGGAACTGAGAAAGTCGTACAGAAAGTTAAAGACTCAGATAACAAGGAACCCTAATGTAAAGATTTCGTGGAAATATTTCAATACCTTTGAAGAGATATACAATTCGCGGGAGGAGAAAGCGAATCAAGTTGTTATGGAGGTTGACGAACAAGAACATTATGAAGAGAGTAATGAACCAGACGAAGAAGACTACCAATGCATCATAGTAATTCCGGAAGGTGAAGACATTTCTAATATCGACAATTCAGAAATCATAGTTGAAGAAACGGTAGAGCAACCGACCATGATGACTATCACTGAAACAAAACAAGCACCTAAGAAATGGGCGAGACGGACTAAAAAACGCCTCATTATCTTGTATATCAACTACATAAGATCTAACAAAGGGAAAGAGATTAATTCCAAAGAGATGTGGCAAGAAATTGGAATGAAAATGGAGAAAAGTCCAGCTGTTTGCAAGAAAATGATGATCAGATTGAAGAATGTTTATAAAAAGATTGCCAGTAGTGATGATGTAGAAAAAAAGAGTACGCCTCTATACCGACTTATGGAGAAAGTAATGAAATTAAAACCCAGGTTTGTAAAAGTTGGTCAAAATAACACACAGCAGGAGAAAGTGTACAAAGATGTTCCAATGGACAATGCTAAAGTACACAACGCTCTACAATACTATTTGCAACACATTGAAGACTTTGTAAACCCGAAATTTGAGAAGAAATTCCTATGGACGGAATTAGCCAACTTTATTTCCGAACCAGTAAATAAAATTTACAATAAAGTTGGTTATTTAAAGCAAGCATATAACAATGATGAAATAAATCAGGACAACTTACAATTCCTTGATTTGATACGAGAGATAATAGCTAAAGAAATAGCAATAAACCTTATTTCTGATATCGAAAACGATACTGCAAAAGAGTATCCGGAGAGAGAATGGATTGATGGGGAAATGGAACAATTATTGCAGTGGTATTTGAGCAATTTGGACAAATTTAAAAACCCGAAGTTTGTCCGTAGTTACCTCTGGATCGAGGCTTCTCATATTTTGAAGAGAAGTCCCTTGGATTGTTCAAAGAAAATGTCTGAAATAAGGACTCAGTACCGTAATATGGTAAAAGAGAATTCTGAGGATCTGTATAATTGGAAGTTTTATGACTTGTGTCAGAAGATTTACGGGACGGGGAAGAAGGCCAACCCATCAAATGCCTAA
Protein Sequence
MEQVVVKTEMQNNGEILLFYVDENGENEEGVLTTVENIENPDMQLDHSNSYIIEENAEVSYEVPQSQDFSVSRDRWTDEEMQRLLVFYNDNKQTFLTGSTKRRHLWAVACKTMLMNKNPTSCDMKLRKLKAKYVEICKNKHRTGEISDQLFDRCHQAFSDDPHLKFLVESTSEEREIKLPIAQQPNDGIVVLKKVNTHKSTDSKVEMLLQLYMKYKKSFRKEYFTRNLWETIALELGTEDGLYWQKRFLNFKQHYISMLEKRKDGICEINWPYMKHFDEIFKDDEDFRRKYPFIQEEIMPEEIVQTSHDHDWLETEKMVLVKYNYDCFEDFQDPKIPNSFLWTEIGRLLDKSPEVCKDKYFELKQEHYIKYLEGGYDLRERKPLDIVLDYIISKETELELSKSYISESGIWKTEEIDEIAQFLYDNVEMFKDPICYFVCWGIVSMKLKRPVGSCRQQWEELVTLYKSILDDKKENPDMQIDWRYIELFDRIFDYGMDTNLLNGYEKPKEIMDDKAGVKRVSINLNDMKTENGTDDDESFDERGFPKRSRSSSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEVLAKQIGITATQCAHRFRNLKQVYTAYVQREINKPEMPIVWPYYALCKKVFGYRAIKAKLKNGKNDSDTEEWSAKEINKLIGYFAQNFDEISNNVDDMSRWTALASDLDKSEVACKDKFMELRKSYRKLKTQITRNPNVKISWKYFNTFEEIYNSREEKANQVVMEVDEQEHYEESNEPDEEDYQCIIVIPEGEDISNIDNSEIIVEETVEQPTMMTITETKQAPKKWARRTKKRLIILYINYIRSNKGKEINSKEMWQEIGMKMEKSPAVCKKMMIRLKNVYKKIASSDDVEKKSTPLYRLMEKVMKLKPRFVKVGQNNTQQEKVYKDVPMDNAKVHNALQYYLQHIEDFVNPKFEKKFLWTELANFISEPVNKIYNKVGYLKQAYNNDEINQDNLQFLDLIREIIAKEIAINLISDIENDTAKEYPEREWIDGEMEQLLQWYLSNLDKFKNPKFVRSYLWIEASHILKRSPLDCSKKMSEIRTQYRNMVKENSEDLYNWKFYDLCQKIYGTGKKANPSNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00820033;
90% Identity
iTF_00819128;
80% Identity
-