Basic Information

Gene Symbol
dnajc2
Assembly
GCA_905220455.1
Location
LR999988.1:11762568-11765248[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.7 9.6e+03 -2.8 0.2 6 15 298 307 297 309 0.64
2 3 1.3e-05 0.017 15.6 0.0 3 31 434 466 434 469 0.87
3 3 5.6e-14 7e-11 42.5 0.3 2 44 557 603 556 605 0.92

Sequence Information

Coding Sequence
ATGACGGATGCTGGCTTGTGTACTAATAGACGGGTGGTGGCGATACCATGGCCGATAGTGAAGAGGAAGGTGGAGTGCGCGGGCGCGGCATTCATTAGATATTTTAGTATAAAATGTCATGGCGATGATGCTTTGCTTAGTACGTCCAAGGCGAATGAAAAAGCCGAAGAGGTGATCTTTGACGATGACGTCGAGTATCTGCGGAGCTTGGACCCTAAAGACTGGAAAATGCAGGATCACTACGCCGTGCTGGGTATGAAGAACCTTCGCTACAAAGCCACTGATGACGACATCAAGCGCGCATACCGGCAGAAAGTGTTGAAGCACCACCCTGATAAACGCAAGGCCCAAGGTGAGGACGTTAGGAGCGACGACGACTACTTCACATGCATAACAAAAGCTTACGAGACCCTCGGCACACCGTCCAAACGCAGGTCCTACGACTCGGTAGATCCCACCATAGATGATGCCGTACCAACTCTAGCTGAGATCAAAAAGGAAGGCTTTTATAAAATTTTCAGTAAGGTCTTTGAATCCAATGCCAGATGGTCTGAGAAGAAATATGTTCCAGTACTTGGTGATGAAAACAGCTCAAGGGAACATGTCGATAGGTTCTATGCTTTCTGGTATGAATTTGAATCATGGCGTGAGTTCTCTTACCTTGATGAGGAAGAGAAAGAAAAGGGAGCAGATCGTGAAGAGCGGAGATGGATAGAAAAACAAAACAAAGCTGCCAGAGCCAAGCTAAAGAAGGAAGAGATGACTAGAGTACGGACATTGGTGGACTTGGCTTATGCAAACGACCCCAGGTTGCAACGGTTCAAGCAGGAGGATAAAGATAAAAAATTAGCAGCAAAGCGAGCAAGACAGGATGCAGTCCAAGCAAAGAAAGCTGAAGAGGAACGTCTCATAAAAGAAGCGCAAATGGCGAAACAAAAAGCAGAAGAGGCTGAGAGGGCCCGTCTGGAAGCAGCACGAGCGGAACGCGAACAACAGAAAAAGAACCTCAGGAAAGAACGCAAAGCATTCAGAGATTTCTGCAAAGCCAACAACTATTATGCGCAGAATGAAGAAGAAACCGTCGCGAACATGGCCGCAGTCGAGAAAATCTGTGAGTTATTGAAGGCTAATGAACTGCAAGACTTTGTAAAGGAACTAGAATCCAAAGGAAAGGAAGTATTCGTAAAAACAGTTAAAGAAACAGAAGACAAGCTTGAAGCTGAAAGAAAAGCTTTGTTCGAGAACAAAAAGGCAGAAGATCAAAAGACAAAGAAAGATTTAGCAATTAAAGCTCCTATAGAATGGACGGTAGAATTGACGCAATTACTTATTAAAGCAGTTAATCTATTCCCCGCCGGTACAAATCAAAGATGGGAAGTAGTAGCAAATTTCTTAAATCAACATGGAGTATTTATTGACGAAAAACGGTTCACAGCTAAAGACGTACTGAACAAGGCTAAAGACTTACAAAGTTCCGACTTTTCTAAAAGTAATCTAAAGAAGGCTGCTAACGACGAAGCCTTTGATCAGTTTGAGAAAGAAAAGAAGAAGGTGAAGGAAACTAATCACGTCGACGACAATGGGATATCGAAAAATGACAATCCCGTTAAATTGGTTAATGGGGTCGTAAATGCAAAAGTGAATGACGAAGGAAACAAGCCAGAAGAGAGGGCGTGGACCAAAACTGAGCAAGAGTTGCTTGAACAGGCCATTAAGACGTTCCCGGTGAACACGCCCGAGAGGTGGGAGAAAATAGCCGACTGCATCCCGAACCGTACCAAAAAAGACTGCATGAAGAGATACAAGGAGCTGGTGGAATTAGTGAAAGCTAAAAAACAGGCGGCCAACCTCGCCAAGTAG
Protein Sequence
MTDAGLCTNRRVVAIPWPIVKRKVECAGAAFIRYFSIKCHGDDALLSTSKANEKAEEVIFDDDVEYLRSLDPKDWKMQDHYAVLGMKNLRYKATDDDIKRAYRQKVLKHHPDKRKAQGEDVRSDDDYFTCITKAYETLGTPSKRRSYDSVDPTIDDAVPTLAEIKKEGFYKIFSKVFESNARWSEKKYVPVLGDENSSREHVDRFYAFWYEFESWREFSYLDEEEKEKGADREERRWIEKQNKAARAKLKKEEMTRVRTLVDLAYANDPRLQRFKQEDKDKKLAAKRARQDAVQAKKAEEERLIKEAQMAKQKAEEAERARLEAARAEREQQKKNLRKERKAFRDFCKANNYYAQNEEETVANMAAVEKICELLKANELQDFVKELESKGKEVFVKTVKETEDKLEAERKALFENKKAEDQKTKKDLAIKAPIEWTVELTQLLIKAVNLFPAGTNQRWEVVANFLNQHGVFIDEKRFTAKDVLNKAKDLQSSDFSKSNLKKAANDEAFDQFEKEKKKVKETNHVDDNGISKNDNPVKLVNGVVNAKVNDEGNKPEERAWTKTEQELLEQAIKTFPVNTPERWEKIADCIPNRTKKDCMKRYKELVELVKAKKQAANLAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00290647;
90% Identity
iTF_00290647;
80% Identity
-