Dpor016095.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- -
- Assembly
- GCA_905220455.1
- Location
- LR999970.1:16898058-16900382[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-08 2.2e-05 24.4 0.0 1 41 14 54 14 57 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAGTCAAAACCTAGAAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTTAAAAATAATCAACTTAATACAAATGCTGCAGCGCTTAAGTTTAATATTCCAAGACGTACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACTATTCTCACAAAACAATTAGAAGAAGAATTATCGCAGCGTATTAAACGTTTTGCAAAAGTGGGTATACCACTTACGCCTAAATTTATCAGGAAACAAGCCTTTTTATTTTGTGAGAGGTTTAAAATCAAGCACTCGTTCAATATGTCAACAAGAATAGCTGGACGCAAATGGCTCAAAATGTTTTTAGCTCGAAACCCATCAATATCAAAAAGAAAACCCCAGGTAATGAATCCAGCTAGAGCTCAAAAAATGAATAAGCCCATAGTTAAACACCATTTTAAAGAAGTCAAGGAACTCTATGAAGAACTAGACATTCTTGCGCATCCAGAACGCTTGTATAACATGGATGAAAAAGGGTGCCGCATTACAGTCCACAAACAAACTGTAGTTTTGGCTGAAAAAGGGAATACAAGAGTACATCTTGTTGCTCCGGAACACGCCGAGAACGTTACAATAGCGATGTGTGTAAATGCTGTGGGTATTGCTATACCGCCTATGATTATTTTTAAGGGAATCAGACGCAAACCAGAATTAGCATCAAATTTGCCACCTGGAACAAAAGTAAACATGGCACCCAAAGGCAGCATGACCACTAGCTTATTCGTAGAGTTCATGCAACATTTAGCACAACATAAGGTTCCTGCCTCGCCCCCTGTGTCTGAATTTAAGAAAGTGGCAGAATTGTCTTCTCAGTCTCTGATAGATGAAAGGAGGTCAGTTCATGTTTCTAACGTCTCTTCAATTTTTCCATCAACTTCCAAAGAGAAGATAGTATCGACATCGCCAAAATTTTCAGCAACAACAGCAAAAAGAAAACCAGTTCTTGTTCCTTACAGTTCTTCAACTGATGCTTCAGACTTAGAATTAGATATTACGGTCAATGATCAATGCCGCCCCATGCTGCTAAGTTCAGTACACCGCTTCAACGTCGCAGATACGAAAACTGACCCTCAACCATCTCTGTACGATTATCCTCTACCAAGTACGTCCGGTCTACAAGAAAATATCGTCTGTTCTAGCTCTGAATCTGATCTTGATTTGAATCTTAGTGAATCATTTATCAAAGATAACTACATGACTAAACTTCAAGTCTCAGATTTGTACACTTCTTCTTCGTCATTTGATGATGATCTCGAGCAGAAAGGAGAAACCACTCCAAAAAAACGGCTAATACAAAATAAAAGCTCGATTAAAACGAAAGCTCAACTAAAGAGTCATGAGACTAGATCTTCGGATGATGACGTGCCGTTAACTAACCTAATAGAGAATAAAGAAGAATCGTTTCATGCATTTTTGCCAACCCCAAACTATGCTACAATAAAGTCTTTGCGTCCACGGCAAAAAGCTTTTAATTACAAAGGACAAAGAATAGTCAAACATTTGTTTAAAACTGAAGAGAGAAAAAATGAGATGAAGCAAGCCTCGGGTAAGAAAAAAGGAAAGTCTACAATTATTAAACAAGTCCAAAAAAAGAAAACTAATAACAAAAATGATTCCGTAAAACGGCTTAAAAGAACAGAACAACAAAACAAGAAAAAAACGAAAATAGAGATGAAGAAAAGTGCAGAAGGTGATGAATGGTACTGTCACGCATGTGGCGAAAATATAATGGAAGACATGAGACAATGTACCGAATGTCAAAAGTGGTATCACGAGGAGTGTATGGGTCTCACTAAAAAGGATCTCATATTTATATGCCCAGTTTGTAATTAA
- Protein Sequence
- MSESKPRKRGSTWDEDSLRRAMEAVKNNQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILTKQLEEELSQRIKRFAKVGIPLTPKFIRKQAFLFCERFKIKHSFNMSTRIAGRKWLKMFLARNPSISKRKPQVMNPARAQKMNKPIVKHHFKEVKELYEELDILAHPERLYNMDEKGCRITVHKQTVVLAEKGNTRVHLVAPEHAENVTIAMCVNAVGIAIPPMIIFKGIRRKPELASNLPPGTKVNMAPKGSMTTSLFVEFMQHLAQHKVPASPPVSEFKKVAELSSQSLIDERRSVHVSNVSSIFPSTSKEKIVSTSPKFSATTAKRKPVLVPYSSSTDASDLELDITVNDQCRPMLLSSVHRFNVADTKTDPQPSLYDYPLPSTSGLQENIVCSSSESDLDLNLSESFIKDNYMTKLQVSDLYTSSSSFDDDLEQKGETTPKKRLIQNKSSIKTKAQLKSHETRSSDDDVPLTNLIENKEESFHAFLPTPNYATIKSLRPRQKAFNYKGQRIVKHLFKTEERKNEMKQASGKKKGKSTIIKQVQKKKTNNKNDSVKRLKRTEQQNKKKTKIEMKKSAEGDEWYCHACGENIMEDMRQCTECQKWYHEECMGLTKKDLIFICPVCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178455;
- 90% Identity
- -
- 80% Identity
- -