Dpor002287.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- -
- Assembly
- GCA_905220455.1
- Location
- LR999985.1:1475360-1475701[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-09 7e-07 29.3 0.0 4 38 13 47 11 50 0.94
Sequence Information
- Coding Sequence
- ATGAAGCCGCGGAAGCGCAAGCAATACGCCTCTGCTCAACTAGAAGCTGCGCTTCTAGCTATAAATGAAGGGACCAGCAAATACGAAGCTTCAAAAACCTATGGCATACCGAGGACAACTCTGCGTGACAAGAGAAATAATAAATATATAATTAATGAACATTGTGGAAAACAAACTGTTTTAACGAAGAAGGAAGAAAAAAGACTGGTAGACTGGATTTTCTATCTCGGGAAGTCAGGTTTTCCTGTAACTAAGGACCAATTGTTGGAAACAGAAGCAAAATTGGTGGAAAACTTAAATCGCTTTAATCCTTTTAAAGATGGTGTTCCCGGTGTTTATTAA
- Protein Sequence
- MKPRKRKQYASAQLEAALLAINEGTSKYEASKTYGIPRTTLRDKRNNKYIINEHCGKQTVLTKKEEKRLVDWIFYLGKSGFPVTKDQLLETEAKLVENLNRFNPFKDGVPGVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00448972; iTF_00667339; iTF_00667340; iTF_00448992; iTF_00952635; iTF_00237437; iTF_00667337;
- 90% Identity
- iTF_00448992;
- 80% Identity
- -