Basic Information

Insect: Deilephila porcellus
Gene Symbol: -
Assembly: GCA_905220455.1
Location: LR999980.1:13733524-13735508[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.7e-10 4.5e-07 29.8 0.0 1 43 18 60 18 61 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.7e-10	4.5e-07	29.8	0.0	1	43	18	60	18	61	0.93

Sequence Information

Coding Sequence: ATGATGCCTAATAAATACAAGAGAAAGGCAGTGGCTGTGAGAGGAAATTGGTCAGAAGAATCACTAAAAGCAGCTATTAATGCTGTGAAAAAAGATGGATTATCCGTACGCGCGGCAGGTCTCCAGTATCAAATACCTAGAAAAACATTAGAAAGAAGAATAAAGAAAAATAATGACAAGAAAGGACCTATGGGACCACCTACTTTATTTGGAGAAGAAAACGAGAAGAAATTGGTTACTCATATTAAAACAATGCAAGCTAAAGGCTTTCCTTTAACATTGGATGACGTGAGAAAAATAGCTTACGAATTAGCCGAACAGTTAAAATTAAAGCATAGATTCAACAAAGAAAATCAGAAAGCAGGATATGACTGGTTGCAGATGTTCTTAAGCAGAAATACTGATATTACACTAAGGAAGTCAGAAGGAGTTTCTTTGGCTAGAGTCAACGCCATGAATAGATCAGAAGTTAATGGATATTTTCAACTGCTTGAAAGCGTCCTTATCCAAGACAATGAGATGCTACCTCCTAACTGCGTATTTAACATGGATGAATCTGGCCTACAGTTAAACAGTCGTCCGGGACACGTGCTTGCTGAAAAAGGTTCTAAAGCGGTTTCCACAGTGACATCAACTGAAAAGGGGGAGACAATAACCATTATAGCCTGCTGCAATGCGGAAGGCACGTTCTTGCCACCTGCCTGTATCATGAAAGGAAAAAATAAAAAACCCGAGTTTGAAGACGGGATGCCTCCAGGATCAAAATTATTCATGTCTCAAAAATCAGCGTACATAACATCGGAAATATTTTTAGAATGGTTAAAAACACACTTTGTTCCAAGGAAACCAGCCGGAAAAGTTGTTCTTCTGTTAGACGGCCACTCAACTCATTGCAATTCCGTGGAAATGTTGGAATATGCCAATCAAAATGACATTATTTTGATATCAATGCCCAGTCACACGTCTCATTATCTCCAGCCCTTAGATCGCTCTGTTTTTAAATCATTAAAACATCACTTTTATGAACAGTGTAGACTTTGGCTAATCCAAAACCCAGGACGTCGAATATCGAGGCTTTCTTTCGGAGCTTTATTTAGCAAGGCTTGGGGAAAAGCAGCATCGTCGGAAAATGCAATTGCTGGATTTAAAGCAACTGGAGTGTATCCCCTCAACCCAGAAGCGGTGCCAGATTATGCGTTTATTCTAGAATCTACAAGTGACTCGACGAATACCTCTGTTACACAAGTGCTTCCCCACTGTACATGTACTGCTGTAGACAATGAAAAGGAACATATACCAAGTTGTTCTTATGAACCAAGAAGTGATACAAACTATAGCCCTGAAGTCGTTTCTACAAAATCAAAAGTCTCCGTAAAAACTGCCACGATGTCTAATGTTTCACACCCAAGCTCTCCGAAAGAGGCTTCGTTCAGTAAAGATCCAGATTACACCCCATCTCGAATTTTACAGGATATATCACCTATTCCACAAAAATTGATTGAAGTGCGTAAACGAGCAAAGCAAGTTGGAACACTATTGACTTCGGAAGAACATATCAAAACTAGAAAAAATGCTGTAGAAAAATGTCTAAAAAAGGAAAATGTAAGAAAATGTGTCAAAATAAAGAAGGAAAAAGAAGAGACAATAAAAGGTACTGTTCGATGTGTAAAAAGAAAAGCCATTCGAAGACTATCTGATAATAGTGACGATATTCCATTAAAAATGTTGTCAGATAAGAATAAGAAAAGAAAGTTAGACGAAAAGGACAACTGTCGTGGGTGTGGTGAAAACTACTACGAAACACTTCTCATCGAAGACTGGCTTCAATGTACAGTGTGCCAGTTTTGGGTTCACGAACACTGCACTGCATTTGAAACGATGTGCTCCAGATGTGGCGAAGAGGAGAAAAGAAGACTTAAAAGTAAAAAATGA
Protein Sequence: MMPNKYKRKAVAVRGNWSEESLKAAINAVKKDGLSVRAAGLQYQIPRKTLERRIKKNNDKKGPMGPPTLFGEENEKKLVTHIKTMQAKGFPLTLDDVRKIAYELAEQLKLKHRFNKENQKAGYDWLQMFLSRNTDITLRKSEGVSLARVNAMNRSEVNGYFQLLESVLIQDNEMLPPNCVFNMDESGLQLNSRPGHVLAEKGSKAVSTVTSTEKGETITIIACCNAEGTFLPPACIMKGKNKKPEFEDGMPPGSKLFMSQKSAYITSEIFLEWLKTHFVPRKPAGKVVLLLDGHSTHCNSVEMLEYANQNDIILISMPSHTSHYLQPLDRSVFKSLKHHFYEQCRLWLIQNPGRRISRLSFGALFSKAWGKAASSENAIAGFKATGVYPLNPEAVPDYAFILESTSDSTNTSVTQVLPHCTCTAVDNEKEHIPSCSYEPRSDTNYSPEVVSTKSKVSVKTATMSNVSHPSSPKEASFSKDPDYTPSRILQDISPIPQKLIEVRKRAKQVGTLLTSEEHIKTRKNAVEKCLKKENVRKCVKIKKEKEETIKGTVRCVKRKAIRRLSDNSDDIPLKMLSDKNKKRKLDEKDNCRGCGENYYETLLIEDWLQCTVCQFWVHEHCTAFETMCSRCGEEEKRRLKSKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00341262;
90% Identity: iTF_01197658;
80% Identity: iTF_00428939; iTF_00428940;