Basic Information

Gene Symbol
XBP1
Assembly
GCA_905220455.1
Location
LR999976.1:13279059-13281849[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.1e-18 3.5e-15 56.1 6.6 2 64 43 105 43 106 0.96
2 3 0.0041 4.7 7.7 0.3 35 55 90 110 89 113 0.87
3 3 7 7.9e+03 -2.7 0.1 23 46 140 164 137 182 0.66

Sequence Information

Coding Sequence
ATGAGTGCTCCGATTATAATAACAGTGCCGAAAAACTACCTGGTGGAAGACGAAGACTCCAAAGTGATGGTCGACGTCCCGTCGCCGGCTCCGTCACGGAAGCGGCGACTTGACCACCTAACATGGGAGGAAAAAATGCAAAGAAAGAAATTAAAAAATCGTGTAGCAGCACAAACCTCACGCGACAGGAAGAAGGCTAAAATGGATGAAATGGAAATTCAAATCAAGCACTTCAAAGACATAAATGACAAGTTGATTAGTGAAATCGAGAGCTTGAAGGCGTTGAATGAGCGATTATTAAGCGAGAACACGGCGCTACGCAGCGAGGCCGCGACGCGGACCGTCCCGGATGCCCAGAGACCAGCGGAGTCTACTCCTCAGCAGAAGGAGGGGCAATCGGCGGCGATCCGCGTGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACATCCTCGCTCACCTCGACTCCGAAGAGTACCTTGATACGCTCCATCAACTTGCAGACTCCCTCCTCAAAGAGATTGATGCAGGTGCTGCAGGAGCGACTCAAAATGTCACAGTCAGGGACACTCGAAAGTGTGTTAAAGGAGTTGAAGTGGATACTGTCGCAGCACTCCTATGCGCATCCCTACCCAGACATAGTCGTCTCCGAACCACTTGATACAGTACAAATTAAAGAAGAAAACAATGACAAAGGAGACATGTTCTACGCGAGCTGCGACGAAGCCAACGACTGCATAACAATAGAAGTGCCTTGTGAAGAACAAATAGTGGAAGAAGTAACGCCAGTGCAAATAGACACAGACTTTAATCTTACGGACAATTGTTCTGGAATAACGTTGGAGAGTGACATGAAGATGGTGTCGCCCATGTGTCTCTCCCCTAAATCAGTGGAGGAGAACCTTCTTTCCCCCTCGCACACGAGCTTCAGCTCTGACCTCGGTTACGAGTCGTTGTCGTCGCCGCTCAGTGAATCTGACTCCATGGACTTATCAGATTTTTGGTGTGAATCATTCTCAGAACTGTTTCCCGGACTTGCATAA
Protein Sequence
MSAPIIITVPKNYLVEDEDSKVMVDVPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEIQIKHFKDINDKLISEIESLKALNERLLSENTALRSEAATRTVPDAQRPAESTPQQKEGQSAAIRVARLLLAMCLLSQTSSLTSTPKSTLIRSINLQTPSSKRLMQVLQERLKMSQSGTLESVLKELKWILSQHSYAHPYPDIVVSEPLDTVQIKEENNDKGDMFYASCDEANDCITIEVPCEEQIVEEVTPVQIDTDFNLTDNCSGITLESDMKMVSPMCLSPKSVEENLLSPSHTSFSSDLGYESLSSPLSESDSMDLSDFWCESFSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01358628;
90% Identity
iTF_00427833;
80% Identity
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