Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457122.1:1175377-1193592[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.005 0.41 11.9 1.0 1 23 346 368 346 368 0.98

2 11 0.012 1 10.6 10.3 1 23 375 397 375 398 0.94

3 11 3 2.5e+02 3.1 2.3 1 23 402 424 402 424 0.96

4 11 0.095 7.8 7.8 2.0 1 23 429 452 429 452 0.97

5 11 0.019 1.5 10.1 0.2 1 23 456 479 456 479 0.91

6 11 5.9 4.9e+02 2.2 0.5 3 21 493 511 492 516 0.88

7 11 1.4 1.2e+02 4.1 0.4 2 23 571 593 570 593 0.94

8 11 0.011 0.87 10.8 0.6 2 20 609 627 608 630 0.91

9 11 0.00011 0.0087 17.1 1.0 1 23 636 658 636 658 0.98

10 11 1.4e-05 0.0012 19.9 3.3 1 23 665 687 665 687 0.97

11 11 3.6e-05 0.003 18.6 1.3 1 23 693 716 693 716 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.005	0.41	11.9	1.0	1	23	346	368	346	368	0.98
2	11	0.012	1	10.6	10.3	1	23	375	397	375	398	0.94
3	11	3	2.5e+02	3.1	2.3	1	23	402	424	402	424	0.96
4	11	0.095	7.8	7.8	2.0	1	23	429	452	429	452	0.97
5	11	0.019	1.5	10.1	0.2	1	23	456	479	456	479	0.91
6	11	5.9	4.9e+02	2.2	0.5	3	21	493	511	492	516	0.88
7	11	1.4	1.2e+02	4.1	0.4	2	23	571	593	570	593	0.94
8	11	0.011	0.87	10.8	0.6	2	20	609	627	608	630	0.91
9	11	0.00011	0.0087	17.1	1.0	1	23	636	658	636	658	0.98
10	11	1.4e-05	0.0012	19.9	3.3	1	23	665	687	665	687	0.97
11	11	3.6e-05	0.003	18.6	1.3	1	23	693	716	693	716	0.95

Sequence Information

Coding Sequence: ATGCGTTGTTGCGTTGCTGGTTGCAAGAATGACTCGAGACACATCTCCAAATCACAGGGGATTACATTTCATGTATTCCCAAATGAGCCCACACTACGTACGGCATGGCTCCAAGCACTTGGCAAAGTGGACTGGACTCCGAAGGAACGGAGTGCAGTGTGTTCCGAGCACTTTCTGTGCGAAGACTTGTATGAAACCAAGAGTGGGTTGAGGAAAGTCAAAGTAGGAGCCGTACCGTTTATACTGcaggATACGAGTACTTGTGATTATGGGGAGCCGGCAAGTTTgaaagtgtgTCGCGTGTGTCTCATGATGGACTGCAAGTTATTtccaataaatgtttataatctcAAACAGGCGTATGAACATTTAACTGGAGTTACGgtgTGTGCAGAGGAGAAGCTACCTCAGAAGTTGTGTTATGAGTGTGCAGCAAGATTGGTGAATAGCTACAAGTTCAGGACAAAGTGTTTGCGGGCCAATTCACTTATGTTGGAAATAGTTAAAAAGCAGAGAGAGCTAACcctacaaaacataaaaacgaTAAACAGAGAGAACAACCAGTTGTCATCCCCACTTATCCCCAAATTCTATCAAGCTGACCACTACGACCACCACATTGACTACGAACAGCCCAAAATCGAAGAAGACATAAAAGAAATCAAACGGGAAGAGAATGAAATGAATGAGATATATATTGCTGAGGGGGAGGAAATCGCTCCGGTGGAGAcagaggTTCAAGATGATGTTGTAGCAGACAATATTTCAGTAAAGAATTACTCCAGTGACGACAGCTTGCCATTAGAAAAGGCTAAGAAGAGAAAAAAACGCAAAATTGAAAAGAAAGAAGTTGTTAAAGTTAGAAAGAAACAGaTAAAACGCGACCCAGCCGAGCCCAAGATCGACCGTCGCAGGAAACCATTCCTGAACGACGACCTCAACGAGACATTATTCACGATAACTGACTTGACCTTCGAAGAACAAGTAGCTGAGATCGAGAAGAGACAAGACAGCGCCAACTACAAAAACGCCGTTTTCAAATGTACGGAGTGCTACAAAGGATTTTTGGATGAAGACGCTTATAATACGCATATGACGAGGCATACCATTCAATGCGGCGAGCACTCGTGCGAGATCTGCAAGACGCACTTCAAGCACTCGCACGCGCTGCGCAAGCACATCACGGCGCACCACACGCAGCGCTTCAGCTGCCGCCAGTGCGTGTACGTCACCACGCACCGCCAGACCGCGCGCCTGCACGAGCGCTGGCACAAGGGCACCAAGTACCGCTGCCCGCACTGCCAGGACGAGTTCGTTAAATTCACAACGTACATGGGTCACATACGGATAAAGCACCCCTCGGACTTCGTGTGCGAGTTGTGTGGCTACTCCTTCGTCAGCATCAAAGGCATTGAGCTGCACAAGAAGCTCAAACACAGGCTCGAAGATGGACAGGTGCCAGAAGATGGTCCATTCTGTGAGCTGTGTAACGTAAGATTCGTTTCAATTGAGGCGCATAGAAGACATCTTAACGTGTCTGGAAGACATGCCGCTACAGATAAAGAGGGGAGGGAAGCGAACAAACCGAAAAAAGGGCGCAAATCTAAAGAGATAAAGGAACGGGAGAAGAGATCTCGGGAGAAGAGCAGGGAATCAGAGGAGAAGAGGAAAGTTTATCCTAGTCAATTGAGGAAGGCGGAGGGACCTATACCTTGCGAACAGTGTGGGCTGCAACTAGAAGATTCCCGGGCCTACCACGGCCACTTCAGGAGAATGCACCCCGACAAGAACCGAACCAAGTACCCGTCCATGAAGAGCCCTTGTATGTGTGAGGTGTGCGGCAGAATGTTCCAGAGCTACGCCCTCCTAAAAGACCACACGTGGGTCCACACCGGCGAGCGACCGTTCAAGTGCGACGCGTGCGACAAGTCGTTCCGAATGAAGCAGCGATTGGTCGCGCATCGACGAGTGCACAGCCAGATGAAGGTGTCGTACGCCTGTACTCTCTGCGGGAAGAATTTTTCAACACACAGCAATAGGCAAAGGCATATGTTTatCCACACAGGACTAAAGCCGTTCAAATGTGAGATGTGTGGGAAAGGCTTCAAGCATGCTAGTGAGAAACGAGCTCACATCACATATGTACACTTGAAGAAACCCTGGCCTAAACGAACAAGGGGGAAACGGCGGAGTGACAGTCGACAGGGCATGCTACCACAAGGCCCCCCAGGTACCGATATGGACGGAGTGCAACCAATATGGCCGCCTTGCGACCCCAAAATGGCCGACATGAATATGATCGAAGACAAACCAATGTACTACTCATTGAAAATATAG
Protein Sequence: MRCCVAGCKNDSRHISKSQGITFHVFPNEPTLRTAWLQALGKVDWTPKERSAVCSEHFLCEDLYETKSGLRKVKVGAVPFILQDTSTCDYGEPASLKVCRVCLMMDCKLFPINVYNLKQAYEHLTGVTVCAEEKLPQKLCYECAARLVNSYKFRTKCLRANSLMLEIVKKQRELTLQNIKTINRENNQLSSPLIPKFYQADHYDHHIDYEQPKIEEDIKEIKREENEMNEIYIAEGEEIAPVETEVQDDVVADNISVKNYSSDDSLPLEKAKKRKKRKIEKKEVVKVRKKQIKRDPAEPKIDRRRKPFLNDDLNETLFTITDLTFEEQVAEIEKRQDSANYKNAVFKCTECYKGFLDEDAYNTHMTRHTIQCGEHSCEICKTHFKHSHALRKHITAHHTQRFSCRQCVYVTTHRQTARLHERWHKGTKYRCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSIKGIELHKKLKHRLEDGQVPEDGPFCELCNVRFVSIEAHRRHLNVSGRHAATDKEGREANKPKKGRKSKEIKEREKRSREKSRESEEKRKVYPSQLRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTKYPSMKSPCMCEVCGRMFQSYALLKDHTWVHTGERPFKCDACDKSFRMKQRLVAHRRVHSQMKVSYACTLCGKNFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRTRGKRRSDSRQGMLPQGPPGTDMDGVQPIWPPCDPKMADMNMIEDKPMYYSLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00429076;
90% Identity: iTF_00429076;
80% Identity: iTF_00428188;