Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457094.1:8392078-8398473[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 7.8e-06 0.00064 20.7 0.8 1 23 117 141 117 141 0.99

2 7 0.0045 0.37 12.0 0.4 1 23 147 171 147 171 0.98

3 7 0.00041 0.034 15.3 0.8 1 23 177 201 177 201 0.96

4 7 1.4e-06 0.00012 23.0 1.6 1 23 206 230 206 230 0.97

5 7 2.8e-05 0.0023 18.9 3.5 1 23 236 260 236 260 0.98

6 7 0.001 0.082 14.1 0.8 3 23 268 290 266 291 0.87

7 7 1.1 92 4.5 2.9 2 23 670 693 669 693 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	7.8e-06	0.00064	20.7	0.8	1	23	117	141	117	141	0.99
2	7	0.0045	0.37	12.0	0.4	1	23	147	171	147	171	0.98
3	7	0.00041	0.034	15.3	0.8	1	23	177	201	177	201	0.96
4	7	1.4e-06	0.00012	23.0	1.6	1	23	206	230	206	230	0.97
5	7	2.8e-05	0.0023	18.9	3.5	1	23	236	260	236	260	0.98
6	7	0.001	0.082	14.1	0.8	3	23	268	290	266	291	0.87
7	7	1.1	92	4.5	2.9	2	23	670	693	669	693	0.93

Sequence Information

Coding Sequence: ATGGCCGCTTGGCGCGCTGACAGTCAATCTATTAAATCGTCACAAAACAACATAAATGCATTAAATACTGAAGATTTTGAGATACTGCTGGATAATATTGGAGAAGATATACATATCGAAGAGTTTCACAAGGACATCAGGAGTTCAAAAGTATGTAATGATGTTAAAAGTGGTTCCGAATGTGCCGTGACGTCTGAAAGCGAATTAATCGGCACGGAAGATTTTGTTGACTCTCATGAAGGCTTATCATCGCACAATGAGACGTCAGAGATGCCAAAGTGTAATATTGAAATGTCAAAATCAAACATGGAAAAGAGCAAAAGGAAAACGGAAGACAACAGCGCACGGTACAAATGTGAATATGACGGGTGTGAAAGGACATACAGCACAGTCGGGAATTTACGGACACACATGAAAACACACAAAGGTGAATACAGGTTCAAGTGTCCCATGCAATCATGTGAAAAAGCATTTCTTACATCATACAGTTTGAAAATACACGTAAGGGCCCACACTAAAGCAAAACCTTTCATGTGCAGCAATGGTGGATGCAGGAAAGCTTTTAATACACTCTACAGGCTACGAGCACACCAAAGACTTCATAGTGGAGATACATTTAACTGTAAAGCAGACGGTTGTACCAAGTTCTTCACAACACTCAGTGATCTCAAGAAACATATTCGCACACATACACAGGAAAGACCGTACAAATGCAGAACAGAAGGTTGCGGTAAGTCGTTCACAGCGTCGCATCACCTCAAAGCGCACGGACGCACGCACTCGGGCGCCCGGCCGCACGCGTGCGCCGCTCCGGGGTGCGGCCGACTGTTCTCTACCGCTACTAGCCTTCGGGCACACGCTAAGAAACACCATATTGAGGCGGAAGCACTGGCAAACGTACAAGTTGTTCAAGTGACGGAAGTGCAGCAACCACAACAAGGAGCCCAGCCACTGACGAAAACGAACGACGTAATGAACTGGGACGGCCTCCTAGAGTCATTTGGCAGGATCACGACTGAATCCAATTCGACAGACGGGAGCTTAGAGGACATAACAAGTGTCAGTAACGTAGATATAACAAAACTGCTTTTCGATGACGCCACTAACAATACTAAAACTAATGAAGCTGATCTTGCCGTAGATTATGATTTGGCAAACTTAACATTTTCTCCGTTTCATAACGTCAAATCTGAGAAGAAAGACACAGATAACACGTGGGTAGATGTTAATGAACTGCAGCCGACAGTACCGTTACAGTCTGCGGTAGACAACTCgataaaaatggaaataaaatcaaaagcaATTCAATTGGCTTTGgcaaatgaaattgaattacAAGCGCCGTGGGTCGACGTGAGCGCTCTAGCCGCTTCGATATCGGAAACTCCTGTGAGTATAAAGGAGCAGACAccagaaaacatttttacattagCAACGTTTGTTCCGACACATATGCAAAGTTATATAGATTTGAATACAGATATTGCACCTACTGCAAATCTCATGACCCACACTTCTTTCGATTTAGATACTCCAAACGTATTAGACGTTGGTGATAAGGTATTCAATGACAGTGAAATTGTCATAAATCTAGAACCGAATAAACTTGATACGGATTTGGATATATTTTTCGGACCAGATGATGATAGATCTCTAAACACACCCCCGCCGTCTAAAGTCCaacacaaaattgaaataaacccCGCTAATTCTGTTCTATTTAACACGGATTTAGATTTAGAAGATACGTTGTTATTTGACAACGAACCTCCTTCTGATATGTATGTTGTTAGAACCGAGAATATTTTTGGCAAAGAAATGGCTAAAAGAAATGCTTTGGAGCAGTTGGCTGCTGATGCGGGTATCTGTTCTTGTACGAATTGTCAGTGTGATCCTTCGAAAGGTGAATGCAGAAACTGCAGTCACGATAAACCCGTAGTGGTTCGACAAGGCTGTACGGAAGACACTTGCTCATGTGTCAATTGTGAATGTGATCATGCCGCAATGAAATGCGCCGTTGGATGCGGCAAAGCGACGGATACTAACCACAACACATTCTTACATTACCATCGACGGCATAATAACTCTAATCTTGAAGATTTAGGTATATTCACTCTTCACGAATGCGATGAACAAGCACCGACAACACCTACGCTTGTTGACAGTATAAAGTGTTCTTGCGACCACTCTAACAAAGACGCGACGTGTCACAATGCAGACGAAAAATCGGACGAGTCTTCGTGTTGCAGTAAAAAAAAGTCATGCTGTATCACAATATGTTTCAAGAAACTTGATGCGTTCAAACAGTTTCTCTCAGACAATGAACTGGTGCACGCTTTGAAATCGCACAATCTAACAACGACTTCGTAA
Protein Sequence: MAAWRADSQSIKSSQNNINALNTEDFEILLDNIGEDIHIEEFHKDIRSSKVCNDVKSGSECAVTSESELIGTEDFVDSHEGLSSHNETSEMPKCNIEMSKSNMEKSKRKTEDNSARYKCEYDGCERTYSTVGNLRTHMKTHKGEYRFKCPMQSCEKAFLTSYSLKIHVRAHTKAKPFMCSNGGCRKAFNTLYRLRAHQRLHSGDTFNCKADGCTKFFTTLSDLKKHIRTHTQERPYKCRTEGCGKSFTASHHLKAHGRTHSGARPHACAAPGCGRLFSTATSLRAHAKKHHIEAEALANVQVVQVTEVQQPQQGAQPLTKTNDVMNWDGLLESFGRITTESNSTDGSLEDITSVSNVDITKLLFDDATNNTKTNEADLAVDYDLANLTFSPFHNVKSEKKDTDNTWVDVNELQPTVPLQSAVDNSIKMEIKSKAIQLALANEIELQAPWVDVSALAASISETPVSIKEQTPENIFTLATFVPTHMQSYIDLNTDIAPTANLMTHTSFDLDTPNVLDVGDKVFNDSEIVINLEPNKLDTDLDIFFGPDDDRSLNTPPPSKVQHKIEINPANSVLFNTDLDLEDTLLFDNEPPSDMYVVRTENIFGKEMAKRNALEQLAADAGICSCTNCQCDPSKGECRNCSHDKPVVVRQGCTEDTCSCVNCECDHAAMKCAVGCGKATDTNHNTFLHYHRRHNNSNLEDLGIFTLHECDEQAPTTPTLVDSIKCSCDHSNKDATCHNADEKSDESSCCSKKKSCCITICFKKLDAFKQFLSDNELVHALKSHNLTTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820489;
90% Identity: iTF_00429440;
80% Identity: -