Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457105.1:2555625-2561448[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0004 0.033 15.3 0.7 1 23 283 305 283 305 0.99

2 11 1.7 1.4e+02 3.9 9.1 1 23 312 335 312 335 0.94

3 11 4.1e-05 0.0034 18.4 0.2 1 23 366 389 366 389 0.96

4 11 0.0056 0.46 11.7 0.6 2 23 394 416 393 416 0.93

5 11 0.0061 0.5 11.6 0.1 2 20 427 445 427 447 0.95

6 11 5.7e-06 0.00047 21.1 0.5 3 23 457 477 457 477 0.99

7 11 0.21 17 6.8 0.6 2 23 493 515 493 515 0.95

8 11 9.4e-05 0.0078 17.3 4.5 1 23 532 554 532 554 0.98

9 11 0.0012 0.1 13.8 0.8 1 23 560 582 560 582 0.97

10 11 8.9e-06 0.00073 20.5 1.9 1 23 588 610 588 610 0.96

11 11 0.00035 0.029 15.5 3.1 1 23 616 639 616 639 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0004	0.033	15.3	0.7	1	23	283	305	283	305	0.99
2	11	1.7	1.4e+02	3.9	9.1	1	23	312	335	312	335	0.94
3	11	4.1e-05	0.0034	18.4	0.2	1	23	366	389	366	389	0.96
4	11	0.0056	0.46	11.7	0.6	2	23	394	416	393	416	0.93
5	11	0.0061	0.5	11.6	0.1	2	20	427	445	427	447	0.95
6	11	5.7e-06	0.00047	21.1	0.5	3	23	457	477	457	477	0.99
7	11	0.21	17	6.8	0.6	2	23	493	515	493	515	0.95
8	11	9.4e-05	0.0078	17.3	4.5	1	23	532	554	532	554	0.98
9	11	0.0012	0.1	13.8	0.8	1	23	560	582	560	582	0.97
10	11	8.9e-06	0.00073	20.5	1.9	1	23	588	610	588	610	0.96
11	11	0.00035	0.029	15.5	3.1	1	23	616	639	616	639	0.96

Sequence Information

Coding Sequence: atggatatttttaaatattgtgtcgCGTGTTTGGTGACCGATGCGAAGATGTACGATATaagtacaaatatttctttgaataCTCTGGGTGATATTTATTCGCAATTGGTTCAAAAATCTCTAGTTGAAAAAAGCATGCATGTTTGTTTTGAATGCGCCAGATTGTTACACAAGTTTTTAGAGTTTAAATCTAAATGCCACAGAGCTCACAACATTTTGACTGCATTCAAAGAAAACAATTCTGagGTTAACAAGGAAAGAATTATAAATGTTGATCGAACAATTAATAAACTAACATCAAATCTCACTTGTTCTACAGTAAAAGTTGTAGCTAGCATAACTGATATTGAACCAGATATTGAAAAAAGATATATAAAATTAGAATCAAATGTTGATGgagaacaacaaataaaaaaggaagcacaaaatattcaaaatgaaGAAAATGAAAGTGAACTTACAAATTGTAACACAGAAACTGAAGTTGACAATGATATGCCAATTGAAAATCATTTCTCAGAAGATAGCCTTCCATTAGATAcagttattacaataaaaaccaaacaaaaatcTCCTAAAGCAAAGAAAGAACCcaaaacaaagaaaagaaaaattaaagagAAAATTGAAAAGATAGACATAGACAATTCTATGAGTGATGATGAACCTTTATCCAAAGTCTCAAAGAATTGTAATAAAGacaaggaaaatattaaaaagaaatatcctaagaattttaatataagttactTTGAAGATTTTGCTACTGTTGTGTTCTTGACTCCTGAAGATGCTAAGAAGGAAATGCTGCTTAGAAGAGATACATCAAATTATAAGAACTCACCTTTTAAGTGTGAAATGTGTTTTAGAGGGTTTGAAGCTAAGGCTGCTTTTGAAAACCATATGAAGAGGCATAGTGTGGAATATGGTGAACACAAGTGTGACCTTTGCCATTTGAGGTTCCCGGAGCAGAGGTTTCTATGTAAACACCGTCTTGCCTGCCACAAGAGGAAGTTTTATTGCAAGTTGTGCTCATATGTTTGTTTTTGCACACATCAAGCGAAAACACACGTCAGCCTCCACAAAGGGAAGAAATATCCTTGCAAAGAATGTGGTGAGGTATTTAGtatgcCCAACAGTTTACTGATGCACAAGCGACTGAAACATTTGACGGAGTGCGTGTGTGAACTGTGCGGGAACACGTTTGCGACGCCGCGAGGACTGTACTCTCATAACATGAAGATACATAGGCAGgatAAGAATGGCAAACTGGGTCCAAAGTGTGAAGATTGCGGAATACATTTCGCAACAGAAGTAGCGTGGAAGAAACATTTGGTTCTCTCATCCAAACACGATGTCagcaATGGGTGCAAATATTGTGGCGAGACATTTGCAAACAGCGAAGAACTCAAGTCGCACACGAAGATACATGCGAGGAAACACGCAAATCGTGCTGATAATATCAAACTACCCGCGTCTTGTAGTATTTGCGAGAAATGGCTGACCAACCGCAACGAATACAAGTTACACATGACGTCAGAGCACCCACAGTCTGACGTCGCCAAAAGGTTGGATTTGGAGGACCAAACGCCATTTGTGTGTGAAATATGCGGGCAGATGTTCAAGAAGCAGTGTTTCCTCACATACCACCAGCGTAAACACAGCGGCGAGCGTCCGTACGAGTGTACGCAATGCCACAAGCGGTTCCAAGTGTACGGCGCGCTCGCGTCCCACCGCGCCGTGCacgagcgcgcgcgccgccacgcCTGCTCGCTCTGCGGACGACTCTTCACCTTCAAGAGCGCGCTCAACAAACACATGAAGGTCCACCTCGGTATTCGACCACACAAGTGCGCGATCTGCGACAAATCCTTCATCAACCGATGTGACGTCAAACTACATATCAAATACGTCCACAATAAAGTGCCGTGGCCCAAGAGAGACAGAAGCAAACGGACCAACACTGACGGAGCTTTCATACAATACTCATAG
Protein Sequence: MDIFKYCVACLVTDAKMYDISTNISLNTLGDIYSQLVQKSLVEKSMHVCFECARLLHKFLEFKSKCHRAHNILTAFKENNSEVNKERIINVDRTINKLTSNLTCSTVKVVASITDIEPDIEKRYIKLESNVDGEQQIKKEAQNIQNEENESELTNCNTETEVDNDMPIENHFSEDSLPLDTVITIKTKQKSPKAKKEPKTKKRKIKEKIEKIDIDNSMSDDEPLSKVSKNCNKDKENIKKKYPKNFNISYFEDFATVVFLTPEDAKKEMLLRRDTSNYKNSPFKCEMCFRGFEAKAAFENHMKRHSVEYGEHKCDLCHLRFPEQRFLCKHRLACHKRKFYCKLCSYVCFCTHQAKTHVSLHKGKKYPCKECGEVFSMPNSLLMHKRLKHLTECVCELCGNTFATPRGLYSHNMKIHRQDKNGKLGPKCEDCGIHFATEVAWKKHLVLSSKHDVSNGCKYCGETFANSEELKSHTKIHARKHANRADNIKLPASCSICEKWLTNRNEYKLHMTSEHPQSDVAKRLDLEDQTPFVCEICGQMFKKQCFLTYHQRKHSGERPYECTQCHKRFQVYGALASHRAVHERARRHACSLCGRLFTFKSALNKHMKVHLGIRPHKCAICDKSFINRCDVKLHIKYVHNKVPWPKRDRSKRTNTDGAFIQYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820369;
90% Identity: iTF_00429317;
80% Identity: -