Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457096.1:8762472-8767809[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.15 13 7.2 0.9 2 23 197 219 196 219 0.95

2 12 0.65 53 5.2 0.9 1 23 219 246 219 246 0.92

3 12 0.39 32 5.9 4.8 1 19 282 300 282 305 0.88

4 12 3 2.5e+02 3.1 0.3 6 23 315 332 313 332 0.95

5 12 9.9e-05 0.0081 17.2 1.2 1 23 338 360 338 360 0.98

6 12 7.9e-05 0.0065 17.5 3.5 1 23 368 390 368 390 0.97

7 12 0.00064 0.053 14.7 1.6 1 23 399 422 399 422 0.97

8 12 0.0018 0.15 13.3 0.1 1 23 428 450 428 450 0.97

9 12 2.8e-07 2.3e-05 25.2 1.9 1 23 456 478 456 478 0.97

10 12 0.00043 0.035 15.2 1.0 1 23 483 505 483 505 0.98

11 12 3.3e-06 0.00027 21.9 4.2 1 23 511 533 511 533 0.97

12 12 0.0012 0.095 13.9 2.0 2 23 540 562 539 562 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.15	13	7.2	0.9	2	23	197	219	196	219	0.95
2	12	0.65	53	5.2	0.9	1	23	219	246	219	246	0.92
3	12	0.39	32	5.9	4.8	1	19	282	300	282	305	0.88
4	12	3	2.5e+02	3.1	0.3	6	23	315	332	313	332	0.95
5	12	9.9e-05	0.0081	17.2	1.2	1	23	338	360	338	360	0.98
6	12	7.9e-05	0.0065	17.5	3.5	1	23	368	390	368	390	0.97
7	12	0.00064	0.053	14.7	1.6	1	23	399	422	399	422	0.97
8	12	0.0018	0.15	13.3	0.1	1	23	428	450	428	450	0.97
9	12	2.8e-07	2.3e-05	25.2	1.9	1	23	456	478	456	478	0.97
10	12	0.00043	0.035	15.2	1.0	1	23	483	505	483	505	0.98
11	12	3.3e-06	0.00027	21.9	4.2	1	23	511	533	511	533	0.97
12	12	0.0012	0.095	13.9	2.0	2	23	540	562	539	562	0.95

Sequence Information

Coding Sequence: ATGAATACGAAGGATTTGTGTAGACTTTGTTTGAGTAAAGATGAgtttttaaaagatttgctaGAAGAAAGTAACAAAAATGTCCTGACCctaataaaagattttttacaaattgtgGTTTATGAAAATGATAATTTGCCTACTAAGATCTGTTTAAATTGTGAAGAAAAAATggtttcatttcaaatatttattatggaatGCTATAAAACACAAGATACACTTAGAGATATATGTGCAGATGAAAAAATGGATTCACATcaaataaaagttgaaaattCTGATGTTGATTTAGGGGTATCTGTAATAAAATCAGAGGTTAAAGACGAAAGAAGTGCAGAAGATCTTGACAGTTCACTGAACAATGAAGCTTCCTTATCAGATCTCTTAGACTATCAGGATGATAATTATGATGAGATTACTgtcaatgatgatgatgatgactacCTGGACAATATAGCGATAGCATCATTGAAACATGTTGAAAATACGATAATTAAAAGACCACCTCCAATAGCAAAAGAGACTGCACAGTTTAAAGAAATTCTTAGAAAGCCAAATTTGAAAGTGAATGATTTTGTTAAATTGGAATGCAGTTTTTGTGAACAGAAAATGAAGACATGGAATGATTTGAATTATCATTATTCAAGAATCCACAAATGTAAGCCTGTTATCTTTTGCATTTGTGGTTTTGAAATAAAGTCTAAAAGTGTTCTGTACCGACATGTGTCTGACCATAAAATAGAGAGTAGAAGACTTAAAAAAGAAGAAGCAATAGCGGAAAATAGAGAAGACCCAGAGGACTCTAAATATGCCAGCTTTAATGTTCAAGATTTTGTCAAGTTCACATGCATTAAATGTGAGAAGAAATGTTCAAGTTGGTACACATTGAAGGCGCATTGTGAGAGAGTGCATAAAATACTACCTATAGTAAACTGTAGATGCGGTATCGCTCTTAAATCCAAATCAGTAATGTATAAACACATACAAGATCATAAAAATCCAAATGTTTTTACATGCGATAAATGTCCACGAATAACAAAATCATTATCAGcactaaataaacataaaatgagGCATGTACCAAAATCTGAAAGAAGATATTGTTGCTCGTCATgcgacaaaatatttaaatcaaaagaCGCCTTGAAATCACATGAGAAGTCCCACATACCGATCGAGGatagaaaaatatatcattgtgaAGTGTGCAACATGAAGTTCACGACGCGTTCGTCGGCGGCGTCGCACAAGCGCGTGGTGCACGACAAGATCAAGGGCTACGTGTGCGACGCGTGCGGCTACGCGTGCGGCACCAACGGGGAGCTGCGCCAGCACCGCGCCATACACAGCGACGACAAGCCCTTCGTCTGCGCCAAGTGCAATAAAACATTCAAAACATACTCGAACTTGAAGACGCATATGGACATCCACGAGGACACGTCGTACGAGTGCTACATCTGCCGCCGCGTGCTCAACAGCCGCCGCACGCTGCGCAAGCACCTGCTCGTGCACGAGGACAAGTGCCGCCACGTCTGCTCCTACTGCAACAAGGCCTTCAAACGCAGGCAGACATTGAAGGTGCACATGTACACGCACACGGGCGACAAGCCGCTGTCGTGCAAGTGGTGCGAGGAGCGCTTCGCGTACGCGTCCACACTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGCCCGCGCACAACCACTACGCGCCCGCCTACCCGCCCGCGCTccccgcgcaccccgcacaccccgcgcaccccgcgcaccccaCGCACGCCGCGCTCCAGaATTTCATCAAAAATGACGTGGCACCAACGAACGTTATTGTGACTAAGAACGAAGTAGAAGCAATGTAG
Protein Sequence: MNTKDLCRLCLSKDEFLKDLLEESNKNVLTLIKDFLQIVVYENDNLPTKICLNCEEKMVSFQIFIMECYKTQDTLRDICADEKMDSHQIKVENSDVDLGVSVIKSEVKDERSAEDLDSSLNNEASLSDLLDYQDDNYDEITVNDDDDDYLDNIAIASLKHVENTIIKRPPPIAKETAQFKEILRKPNLKVNDFVKLECSFCEQKMKTWNDLNYHYSRIHKCKPVIFCICGFEIKSKSVLYRHVSDHKIESRRLKKEEAIAENREDPEDSKYASFNVQDFVKFTCIKCEKKCSSWYTLKAHCERVHKILPIVNCRCGIALKSKSVMYKHIQDHKNPNVFTCDKCPRITKSLSALNKHKMRHVPKSERRYCCSSCDKIFKSKDALKSHEKSHIPIEDRKIYHCEVCNMKFTTRSSAASHKRVVHDKIKGYVCDACGYACGTNGELRQHRAIHSDDKPFVCAKCNKTFKTYSNLKTHMDIHEDTSYECYICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLSCKWCEERFAYASTLRSHRLRCHPDKMAPAHNHYAPAYPPALPAHPAHPAHPAHPTHAALQNFIKNDVAPTNVIVTKNEVEAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00787927;
90% Identity: iTF_01430170;
80% Identity: -