Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457109.1:8314101-8323694[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00042 0.035 15.2 0.2 2 23 137 158 136 158 0.93

2 10 0.00048 0.04 15.1 2.0 1 23 164 186 164 186 0.96

3 10 7.1e-05 0.0058 17.7 0.3 1 23 292 314 292 314 0.98

4 10 0.0011 0.094 13.9 0.2 3 23 393 414 391 414 0.90

5 10 0.0028 0.23 12.7 0.2 1 23 432 454 432 454 0.94

6 10 1e-05 0.00083 20.3 0.2 1 23 486 508 486 508 0.98

7 10 0.00066 0.054 14.6 0.2 1 23 514 536 514 536 0.97

8 10 0.00037 0.031 15.4 0.3 1 23 542 564 542 565 0.95

9 10 0.0058 0.47 11.7 1.9 1 23 578 600 578 600 0.95

10 10 0.0056 0.46 11.7 0.1 1 20 742 761 742 764 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00042	0.035	15.2	0.2	2	23	137	158	136	158	0.93
2	10	0.00048	0.04	15.1	2.0	1	23	164	186	164	186	0.96
3	10	7.1e-05	0.0058	17.7	0.3	1	23	292	314	292	314	0.98
4	10	0.0011	0.094	13.9	0.2	3	23	393	414	391	414	0.90
5	10	0.0028	0.23	12.7	0.2	1	23	432	454	432	454	0.94
6	10	1e-05	0.00083	20.3	0.2	1	23	486	508	486	508	0.98
7	10	0.00066	0.054	14.6	0.2	1	23	514	536	514	536	0.97
8	10	0.00037	0.031	15.4	0.3	1	23	542	564	542	565	0.95
9	10	0.0058	0.47	11.7	1.9	1	23	578	600	578	600	0.95
10	10	0.0056	0.46	11.7	0.1	1	20	742	761	742	764	0.93

Sequence Information

Coding Sequence: ATGGATGGAGATGCAGACGAATTTAGCCTCCATTGGGAGGAAGAAGTAGTTGTCAAGcACAGTCCAACAGTCACTGGTGCTGAGGAAGTTATATGTTCTATGGATAATGTGCAAGGGTCTTATAGCAACATgGACATGGTAGCAGATACAGATCAAATGGCAGCAGAAAACTTAATGTTCTTAGCACAAGATGTGGTGAATTATGTGGAGTCGGTGGAACTTGACCAAAATGTGGAATGTGTTACCGAGGAGGTCATTACAGATGACTGGGTCATCTCTGGAGGACAGGAAAGGGTGGAGGTACCTATGGAGCAGTTAGCTCAGCCAGTTTTGGATATAAAGGAAGAAAACGATGTAGATGTTCCATTACCAACCGATCAAGACGAGTACACAGCGATGCGTCCGTGGCCATGCGACTTCTGTTCCCGCCGGTTCCGCAAGAAGGCAGCGCTGATGAACCACATGGTGGCGCACCAGAACGACCGGCCGCACGCCTGCAACCTGTGCGGCGTGCGCTACGTGCGCAAGTGCGACCTCATCAACCACCTCAAGGTGCACGCCTACGTGCCCGACGACTCCGACACTAAAGACTACGAAGAATTATTAGACTGTAACAAAATTACTAAACCAAAGAAGAAACGTGGAAGGCGGAAAAAGAATCCAGAACCAGTTGAGAATGGTGCGTGGGAGAACATGACGTCAGCGCGCACACAGCAGTGGTCGCGGCGCGCGCGCTCTCCGCCCAAGCCGCCTCCCTCCCCTCCCTCGCCGCCGTCTCCTCCTTCCCCTCAGTCTCCGCAGTCTCCCGCGTCGCCGCCGTCTCCCCGCTCGCCGCCTTCACCCCCGCCACCGCCTGCGGATCCGACGCGCCCTTTCGTATGCCGGCACTGCGGAGTCGGGTTTGCGAGAGAAAAGGCGCTACAATCTCATGCCAGGGTGCACGGCGGCGACTCGCCGGTGGAGTGCGCGTCGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGGCGGCGCACGCGGCCGCGCGCCACCCGcacctgccgccgccgccgcaccacGCCGCCGACATCTACGACGACGACGACTCCGGCGACGATATGGAGTACCGCGTGTCGCCAACTGTGGAGATGAGCGAGTCTCGAGCGCGCAACACGGACGCGCGCCCGCCCGAGCTCTTCTGTCGACACTGCGGCGTCGCCTTCCAGCGAGCTGACTTACTGCGCCGCCATGTTGCTGCCGCGCACAGCTACAAGCGGCACGTGCGCGCGGACAGCTCGAGCAGCGCGTGGGGCGAGCACACGTGCGACGTGTGCGGCGAGGTGTGCACGGACGCGCTGCAGCTGCTCGCGCACGCCGAGCTGCACGCCGACCGACACCAcgacgccgcgcccgcgcccagGATGAAGCGTATGGCAAGAGGTAGAAATAACACATCGTCGTCGGGCAGTTCACGGCAATTCCCTTGTAGAGAATGCGGCAAAGTATTCGGATCGCGGAGTTCTCAGCAGATACACATTCGTATTCACACTGGCGAAAGACCGTACGCATGTCGGTTTTGTTGGAAAGCGTTTGCTGACGGCGGTACGTTGCGTAAACACGAAAGAATTCACACAGGCGAGAAGCCGTACGCGTGCGCGGTGTGTCCGCGCGCCTTCAACCAGCGCGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGACGAGCCAACgGTGGACCAGCCTTTTGCTGTGTGGTGTGTGGGCGGACTCTACATTCAAGCTCTGAGCTAGTTCAGCATCTCATACAGCACTGCGACGCCAATACTGCGCTCAAAAGACAGCCTCAGACTGGTCCACGTAAATACAAACGAAGACGGAAATTAAAGGCCGAGCGGTCGTCGCCGGTGAGTCGCGAGTGGGACCGCGCGTCGGCGTCGCCGCCCCCCGCGTCCCGCTCCGCCACCCCCGCGTCGCCCGCGCCCGAGCGCTCGCCctcccccgcgcccgccgcccccgcgccgcccgccaccccgccgcgccgccgccgccgcgcgcccgacccgcccgccgcgcgcccgcGCATGATACACACCGAGGACCCCAGACCTAGGACTAAACAAGTGAGGCCGCGTCGGCCGCCGCGCCACCCGGCGGATGACTTGCGCGCGATCCGGCCGGCCGCGTCGCCTCCCGCGTCGCCGCCCGCCAGCCCGCCGCGCGACGACGCCGGCCCCTTCAAGTGCGAGATGTGCTCGCTGGAGTTCCCGCGCCGCGACGAGTTGTTACTACACGTGCCCGTGCACATATGA
Protein Sequence: MDGDADEFSLHWEEEVVVKHSPTVTGAEEVICSMDNVQGSYSNMDMVADTDQMAAENLMFLAQDVVNYVESVELDQNVECVTEEVITDDWVISGGQERVEVPMEQLAQPVLDIKEENDVDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLINHLKVHAYVPDDSDTKDYEELLDCNKITKPKKKRGRRKKNPEPVENGAWENMTSARTQQWSRRARSPPKPPPSPPSPPSPPSPQSPQSPASPPSPRSPPSPPPPPADPTRPFVCRHCGVGFAREKALQSHARVHGGDSPVECASCGELCWSREALAAHAAARHPHLPPPPHHAADIYDDDDSGDDMEYRVSPTVEMSESRARNTDARPPELFCRHCGVAFQRADLLRRHVAAAHSYKRHVRADSSSSAWGEHTCDVCGEVCTDALQLLAHAELHADRHHDAAPAPRMKRMARGRNNTSSSGSSRQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAFCCVVCGRTLHSSSELVQHLIQHCDANTALKRQPQTGPRKYKRRRKLKAERSSPVSREWDRASASPPPASRSATPASPAPERSPSPAPAAPAPPATPPRRRRRAPDPPAARPRMIHTEDPRPRTKQVRPRRPPRHPADDLRAIRPAASPPASPPASPPRDDAGPFKCEMCSLEFPRRDELLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00341574;
90% Identity: iTF_00429266; iTF_01430154;
80% Identity: -