Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457106.1:11805625-11809306[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 4.3e-06 0.0046 17.6 2.9 1 44 59 95 59 95 0.91

2 5 0.00028 0.3 11.8 0.8 3 43 133 165 131 166 0.80

3 5 1.5e-09 1.6e-06 28.7 1.0 3 44 201 241 200 241 0.96

4 5 2.8e-08 3e-05 24.6 0.8 3 44 360 401 359 401 0.95

5 5 0.0096 10 6.9 0.0 12 44 440 472 431 472 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	4.3e-06	0.0046	17.6	2.9	1	44	59	95	59	95	0.91
2	5	0.00028	0.3	11.8	0.8	3	43	133	165	131	166	0.80
3	5	1.5e-09	1.6e-06	28.7	1.0	3	44	201	241	200	241	0.96
4	5	2.8e-08	3e-05	24.6	0.8	3	44	360	401	359	401	0.95
5	5	0.0096	10	6.9	0.0	12	44	440	472	431	472	0.90

Sequence Information

Coding Sequence: ATGCTCACGCCGCCTCAAAATCAACAGCGAGTCAACGCGTTTGCACACTTTTTAGAGCTGTGTGGCGATGAACCCACCACGATTCTGGAGAAAATTGTTACTGGAGATGAAACATGGGTTCATCATTTCGAGCCTGAGTCTAAACAGGAGTCGACGCATGGTAATAAGAAAAGGAGCAccatttggaaatatttttcgaaTACCGTGGACAATATGGTGATATGCAAGCTATGTAATAATGTCATGTACGGGAATGAGGCGAGACATTTGAGATGCATCCATCCTAAAGCATACATGCAGTGGCAAAAGACTAAGAAACGTCGACCCATTCAAGCTGAAAATACGATAGACTGTTTAAATGAGAAGAAAACTGATAAAGGGAGGAAAAGGAGTTCAATATGGAATTTTTATGAAGTGATTGGTGATATGGCTAAATGCAAGATGTGTAATGCCATCATGAGAAAAAACAAGTCAAGACATTTACAGACAAGACATGCAACAGTATATAATCAATGGCAGAAAGTAAGGGAGAGTACGGAAGAATTTAGATGGCTGACAACAGataaaccTGCGTACAGATGCCACTCTCGTCGGGGTTGGGTTAAGCAATACATGAAGAAAGTCGGTGATAAGAAATATGAATGTAATCTTTGccacaaaattctaaaaatgaCCACTGGGGATTACAGTAACATGAAAAGGCACGTTCGAGGCCAACatccatattattatgaaaaagaaatggatGGGACTAAAGAAGCAGAGAAAACGCAAATGTTAGAAGAAGCAGAACAGTGCGAAGTAATAGAATACATTATAGAAGATGGAGATTCTGATGATCCTCTGCTGGATAGTGATGCTATATTAAATGCCATAGAAAGTCACCAAACTGCTGAAAGTGATGATGAAAATTCAAGCGCTGAAGTAGACACTGAATCTGCAACACAGGAAAGTGAGAAACCTAAAAAAGTAATACGTGCGGCATCGTTAGACCGACCTGATAACGAATTAGAACAGAAAATTAAAGAACTATGTGTTCAAGATGTGGAAGGTGCACGACAAAAAACAAAGACATGCATTTGGAATTTCTTCACAACGgtagtagaaaataatatatatagatGCTTTTTCTGTAACCGAGATATAACAATATATCCAAAGAGCGTTGGAAACTTAAAGAGGCACATAGCACGCCGGCATCCAGAACACCATGAACTAATACTCAAACATGCACCATTCTATGACCCGTGTAAGAATAAAAAGAGAATGTCTGCCGATGTAGAAGTAGATGAAACAAGTAGCTTGGAATTTGAGGTGTTGGATCGAGGTTGCTTCAAATGCAAGACATGTGGAATAATGCTTGTCACTGGGGATGATCTGCAGCCACTAATAAACCATCTCAAAGATTACCATCCAGAGAAACAATACAAcgaaaatgaaataatagttAATACAAATACAGAATTTGATGTTGACCGGAATGTAGAAATGTAA
Protein Sequence: MLTPPQNQQRVNAFAHFLELCGDEPTTILEKIVTGDETWVHHFEPESKQESTHGNKKRSTIWKYFSNTVDNMVICKLCNNVMYGNEARHLRCIHPKAYMQWQKTKKRRPIQAENTIDCLNEKKTDKGRKRSSIWNFYEVIGDMAKCKMCNAIMRKNKSRHLQTRHATVYNQWQKVRESTEEFRWLTTDKPAYRCHSRRGWVKQYMKKVGDKKYECNLCHKILKMTTGDYSNMKRHVRGQHPYYYEKEMDGTKEAEKTQMLEEAEQCEVIEYIIEDGDSDDPLLDSDAILNAIESHQTAESDDENSSAEVDTESATQESEKPKKVIRAASLDRPDNELEQKIKELCVQDVEGARQKTKTCIWNFFTTVVENNIYRCFFCNRDITIYPKSVGNLKRHIARRHPEHHELILKHAPFYDPCKNKKRMSADVEVDETSSLEFEVLDRGCFKCKTCGIMLVTGDDLQPLINHLKDYHPEKQYNENEIIVNTNTEFDVDRNVEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820267;
90% Identity: iTF_00429206;
80% Identity: -