Delp005064.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Deilephila elpenor
Gene Symbol
-
Assembly
GCA_949752805.1
Location
OX457095.1:13489547-13492072[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-07 9e-05 22.8 0.0 1 39 16 55 16 58 0.93

Sequence Information

Coding Sequence
ATGCCTCGAAGGTACAAGAGAAAAACATCGCGAGCAGCAACTTACACCCAAGAAGATTTGAATATAGCTATTCAAAAAGTAAGTAACGGCGAATTGACAAATTATGCGGCATCTGTTATATATAGAATTCCTAAATCTACTCTCAATGATAGAGTTCTGAAAAAAACCGGCTTAATAAGCCAGACAATGGGCAGACCACCTGCGATACCGTTCGCAATGGAGGCCAGATTAGCGCAGTGTCTACGAGTACTAGAAAAATGGGGCTGGGGTTTGTCAAGACACGAGGTATTAAATATAACTGCAGAatttataaagcaaaataatataaaaacgccATTCAAAGATAATAGACCTGGAGCAGATTGGTTCCTCGCATTTaagaaaagaaacaatttatctattaaaaagCCTCAACCCGTGGAGTACTTAAGAAAAAGAATGACAGACCCTTTTGTGATTCACGAATATTTCTTACTACTTAAACAAACTCTTGATGACTTAAATTTACACGACCCAAACCTAATATGGAATCTAGATGAGACGTCGGTAGCACTAGAcccaacaaaaacaaaagttgtaGGTGGCGTTGGCTCGCCGTGCACCCGGACTACTGCGGGTACCGGGAAAGAAAATATAACAGTGTTAACAACTGTTAACGCGGCAGGCAGTAAATTAGATCCTCTAATCATTTACAAAGGTAAACATGTTTATGAACAATGGCTCGCAGAAGATAAAGAGGAATATACCTTTCAAATTGCTTATGCCGCAAGTAAACGTGGTTGGATAGATTcagagatatttttaaattacatgaaGAAAGTCGTCATTCCCGGTTTAAGAGAAAAACGACCCGTGTTAATTATATACGATGGTCATAGTACACACGTAAATCCAGAAGTTGTATCACTTGCAGTAGAAAACCAGATTACAATCCTAAAATTGCCTGCACATACATCACATCTCCTTCAACCACTAGATTTAGCAGTGTTCAAgtcttttaaaagtatttgGGATCGAAGACTTACAGAATGGCAACGTCAAAATGTTGGCAAAAAACTACGTAAACAAATCTTTGCTGAAATGTTTGCCGAAACATGGCATCTTACTAGCCCAAAAGTCATACGAAACGGGTTTAAAAAGGGAGGTATTTACCCATTCAATAACGCTGTTGTTCCCGTAGAAAAATATGATCCTCTGGCTTACAGAAGATGGTTGGCAagtcaaaatataaatgttaaggTAAAATCGTTGAAACAGCTTtgcttagaaaaatataataacactattataaaagataaaaagattAAAGATTCAACTTGTACCACATTTGAAGAACTACTTTTGTCACAACTTACTCAACAGTCCTATAATAGCAATGGCAAAGAtaatacaatgaaattaaaacggGTTGCCAAAGGAGCAGAAGTTATAACGCGTAAaatgttagaaaaaaataaagagaatttgCTTAAAGATACGTCAGAAAAAGAACTTGGCCAGactaaatcaaaaataaaaaataaaggcataggaaaaaaaacaacaacaaaacctatgaatatacaattaaatagaGATCTCGAACCTAAAAATGAAGCCagtaaatcaaaatttaaaaataaacctgaTAGCTACAAATCAAAAGATCAGAAAATTAATACAATCTGCACCACCTTCGAAAATTTGGAAACTGTAAAAAAGACTAACAAAAAAAGCAAGAGGGATCAGAGCCTTGCTACTAGTACAACTTCTGAAAGCCTAGATATGAGTTTACATAGTGACTCTGATATAATTGATTCACAAAGtgattttttatcatattatatggATAGTATtgacgaaacaaatgttttaatacaaaaatctaaGCAAAATGAGACTTGTAAAGATATAATGGTTAATGAAAAGTATACGAATTTTCCAGATGATACAGTAAACGAAGTACTAAGAGAGAAGCAAAATTGTGTAATTACAACAAATGAATTAGTCGAAAATACACCATCAACAACATTAGGTAACACAAGTAGAAATAAGGTTACTATTTTATCATCTGTTAGATTTAAACCCGAAAACAAACGATTCGTGGGAATGAAAATGTATGAATCCCTACACCTAAAAGAAATCGACAAAAGCTATGACGTGTCTAATACCAGAAAGCGTAAATATATGGAACAAGAAAAAGAAGATTTGTTGACAAGACAAAGAAAATCCAAGGAAAAAGAAGTTTTTGAGGAAGTGAAGAAAGATAAACATTATTCTATAGGCGACACAGTTTTAGTCCGATATTATACAACATGTTGGAAGTACTATGTTGGAGTGATtgaaaacattgatttaaaaaatattatttacacaattcattattataaaacaattggaaaaaaagaaaatgtcaaATTTACTGTACCCAGACGCAAAGATTATGATAGTGTACCCGAAAATTCTATTGTTAAGAAAACAGAATTGTTACAAATAGGTGGAAAGGAATATGTTCTGCTGAATGCTGAAGATGctgtttacttttaa
Protein Sequence
MPRRYKRKTSRAATYTQEDLNIAIQKVSNGELTNYAASVIYRIPKSTLNDRVLKKTGLISQTMGRPPAIPFAMEARLAQCLRVLEKWGWGLSRHEVLNITAEFIKQNNIKTPFKDNRPGADWFLAFKKRNNLSIKKPQPVEYLRKRMTDPFVIHEYFLLLKQTLDDLNLHDPNLIWNLDETSVALDPTKTKVVGGVGSPCTRTTAGTGKENITVLTTVNAAGSKLDPLIIYKGKHVYEQWLAEDKEEYTFQIAYAASKRGWIDSEIFLNYMKKVVIPGLREKRPVLIIYDGHSTHVNPEVVSLAVENQITILKLPAHTSHLLQPLDLAVFKSFKSIWDRRLTEWQRQNVGKKLRKQIFAEMFAETWHLTSPKVIRNGFKKGGIYPFNNAVVPVEKYDPLAYRRWLASQNINVKVKSLKQLCLEKYNNTIIKDKKIKDSTCTTFEELLLSQLTQQSYNSNGKDNTMKLKRVAKGAEVITRKMLEKNKENLLKDTSEKELGQTKSKIKNKGIGKKTTTKPMNIQLNRDLEPKNEASKSKFKNKPDSYKSKDQKINTICTTFENLETVKKTNKKSKRDQSLATSTTSESLDMSLHSDSDIIDSQSDFLSYYMDSIDETNVLIQKSKQNETCKDIMVNEKYTNFPDDTVNEVLREKQNCVITTNELVENTPSTTLGNTSRNKVTILSSVRFKPENKRFVGMKMYESLHLKEIDKSYDVSNTRKRKYMEQEKEDLLTRQRKSKEKEVFEEVKKDKHYSIGDTVLVRYYTTCWKYYVGVIENIDLKNIIYTIHYYKTIGKKENVKFTVPRRKDYDSVPENSIVKKTELLQIGGKEYVLLNAEDAVYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00819097;
90% Identity
iTF_00428057;
80% Identity
iTF_00428057;