Basic Information

Insect: Deilephila elpenor
Gene Symbol: -
Assembly: GCA_949752805.1
Location: OX457104.1:3703450-3709314[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.8e-08 2.9e-05 24.3 0.0 3 40 23 61 23 64 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.8e-08	2.9e-05	24.3	0.0	3	40	23	61	23	64	0.91

Sequence Information

Coding Sequence: ATGGCGGACGACTTAGATGGGATGCCACGACATTACCCAAGGAAGACTGAGACCAAATACGTATTAGAAGATTTAGAAAAAGCCGTTCACGATCTAAGGAACGAAATACTGTCGTTATGGAAGGCAACTATTACTTATTCTGTTCCAAAAAGTACTATACATGACTATCTCAAGAAAGAAATTATGAATGAACCAAAAACTGGAAGAAAAGCTATATTTACTGACGCACAAGAAAAAGAATTAGAACAACATATCATTCAGTGCAGCAAAGTATTTTATGGTTTAACAATAGAGATGGTGcgaaaaattgcatttaaatttgCAGAAGTGAATCAATTGAAGCATAATTTTGACAAAACATCCCAAATGGCAGAAAAAGACTGGTTCTATGGATTTAAAAAACGACACCCTGCAATTTCGCTTCGTAAGCCCGAGTCTACTTCTATCAATAGAATAACAGCTTTTAATGAAACGgaggtaaaaatgtttttcaacAAGACTTTCACTCTTGaggaaaaagaacaaaaaaagaaatataaggAGCAGATAAAAGAAACTGAAAAGACCGCAAAtacaaataaaggaaaaaaaggaGTGAAAAATCTTAGAGCATTTGCAGATGAGAATTTTGAAAAGAAGAAGCAAAAGAGTAATGTACCATGCAAAAAGAAGAAACTCGTTAAAGGAGCTACGACGGAGAAAGAGTATTATTGCCTGATTTGTGACGAGAAGTATGAAGATCCTCCAGACGCCGATGGAGTTTATTCAAATTTAGTGATTAATCAATCAGAAGGATCGCGGGAGGAAAATATGTCGTACCAAACACAACCAGAGAGAGAGGAAAGTACAGAGATGGACTTGGAGGAGTGTTCTGAAGAGGATTTTAGACGTGGAAAACGCTTGAGAACTGTCGATCAGGATGAAGTATGGACTCAGGTAACGAGGAGTGGCAAAAAAAGAATACGGGAAACCATGAATTCTTCAATCGAAGTTGTGGAATCCAAAATAGAAGTTTGCATCACATGCAAAGAAATTCTACCTAAGCAATTCGCATTAGCAAGATTATTTAGATCGGCgaatattaaagatataataagAGTGAAGTATGTTAACCCGTataaaattttagtaacttttaATAGTGAGGAAAGCGCAAGTCAACTGGTACTTAACAAAGCTTTTACGGATAAAGGATGGCGATGTCAGAAGACTCTGGAAGTAGGACTATCATTTGGTGTATTAAGAGATTGTGAAGTAGAGTTGGAGGAGGCTGAGATCCTGGAAAGTTTATCATCACCTACTGCTGAAATTGTGTCCATTAAAAGACTTAACTACAGAGATGCCGAAGGGAAATGGGCTTCTAGCGAAAGCATTCGGATCTGCTTTAAGGGTTCAACATTGCCAGCGTTTGTTTATATACATGGTATTAAAACCAAAGTAGACCCATACAAGTTCCCAGTAACTCAATGTTCCAGGTGTTGGCGATTCGGTCATTCTGGCAAACTTTGTCCATCTCGCAGATTCACGTGTCCTAAATGCAGCGAAAGTCACGCAAATTGtgaaacaaacaattataaatgcGCAAATTGCGGTGGCCATCATATGGCTCTGTACAAAAAATGTCCAGAATATTTGAAAGAGAGAAGAATAAGAGAATTAATGTCGGAATTTAATTGCTCATACAGAATGGCTCTCAACATGTACGTTCCTCCATCCCCACGCGAACAGAACACAAAAGACGCTCAAGATACATCCACTACCTCCCGATTTTCATCAGCCGAATTCCCTGCATTAAACAAACCTCATATTGATACTGACACAAGTAATAGAAATATCGAGACTAAACTACCTCAAAAAAGTAGGAGAAGTACAATGAAAACAAAGGTTCAATTTCATAAGACTAACTGCACGGGTGTTGACTGGGATAACGCTTCTCTTCAATCAGATACCACGCCCCCAAATATTCCACGTAGCAATTATAACgaagaaaaagaagttaataaTCCAGGCTTACTACTGCGTATAAAAGAGGTGATACTTATGAAGAAGTATGACATGATggctaaaattaaaatgatagtaCAAATACTTGGGGAGTGGATTTTATCGTATGTAGTCAAAAATATCAATTCCGTGGCTGTGTTTCAAAATCTTTTTAATGGCTAA
Protein Sequence: MADDLDGMPRHYPRKTETKYVLEDLEKAVHDLRNEILSLWKATITYSVPKSTIHDYLKKEIMNEPKTGRKAIFTDAQEKELEQHIIQCSKVFYGLTIEMVRKIAFKFAEVNQLKHNFDKTSQMAEKDWFYGFKKRHPAISLRKPESTSINRITAFNETEVKMFFNKTFTLEEKEQKKKYKEQIKETEKTANTNKGKKGVKNLRAFADENFEKKKQKSNVPCKKKKLVKGATTEKEYYCLICDEKYEDPPDADGVYSNLVINQSEGSREENMSYQTQPEREESTEMDLEECSEEDFRRGKRLRTVDQDEVWTQVTRSGKKRIRETMNSSIEVVESKIEVCITCKEILPKQFALARLFRSANIKDIIRVKYVNPYKILVTFNSEESASQLVLNKAFTDKGWRCQKTLEVGLSFGVLRDCEVELEEAEILESLSSPTAEIVSIKRLNYRDAEGKWASSESIRICFKGSTLPAFVYIHGIKTKVDPYKFPVTQCSRCWRFGHSGKLCPSRRFTCPKCSESHANCETNNYKCANCGGHHMALYKKCPEYLKERRIRELMSEFNCSYRMALNMYVPPSPREQNTKDAQDTSTTSRFSSAEFPALNKPHIDTDTSNRNIETKLPQKSRRSTMKTKVQFHKTNCTGVDWDNASLQSDTTPPNIPRSNYNEEKEVNNPGLLLRIKEVILMKKYDMMAKIKMIVQILGEWILSYVVKNINSVAVFQNLFNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -