Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: -
Assembly: GCA_963921185.1
Location: OY992532.1:119306518-119307879[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.8e-05 0.0051 19.2 1.6 3 23 244 264 243 264 0.98

2 5 1.5e-07 4.1e-05 25.8 0.3 1 23 270 292 270 292 0.98

3 5 0.00025 0.068 15.7 1.6 1 23 298 320 298 320 0.99

4 5 1.4e-06 0.00037 22.8 0.5 1 23 326 348 326 348 0.98

5 5 4.6e-05 0.013 18.0 2.1 1 23 354 376 354 376 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.8e-05	0.0051	19.2	1.6	3	23	244	264	243	264	0.98
2	5	1.5e-07	4.1e-05	25.8	0.3	1	23	270	292	270	292	0.98
3	5	0.00025	0.068	15.7	1.6	1	23	298	320	298	320	0.99
4	5	1.4e-06	0.00037	22.8	0.5	1	23	326	348	326	348	0.98
5	5	4.6e-05	0.013	18.0	2.1	1	23	354	376	354	376	0.96

Sequence Information

Coding Sequence: ATGACTTATGTGGTAGATTGGAGTAATATCTGCTTGGTGTGTTTGAATAAAGGCGATCACCTATGCGTCTTCCAAAAGGACGAAGAATCTTCCTTGTCTATTGCggacaaaataatgaaatgctCCAATTTCAACATCATAAAGAACAACGAACAGCCAAATAGTATTTGTTTATCATGCTTTGGTGACTTGAATATTGCCTTCAAGTTTCGACAAAACTGTGAGCAGTCCAATTCAATTATCAATGCAATTCTGAGCCAGGACCATCGTGAACTTGAAATAAGTGGGCTTCGCATTAAAATTCCACTGGGATTGAAGGTCACAAAGAAAGTACCCACTGAACCTCCGGAACGCCCCATCGAACAAGATCGAATAAAAGATGAAAACTTTGATATTAAATACTCTGACGAATGTGAAGATTTCGATGCAAATGACTACATGGAGACAACAGACATTTTAGAAGATTTGGATGAGGAAGATGAAAATGAAGATGATAAAAAGGAATTTCAGGCCGATactgaaaatttggaattgatTACTGAACTAAATGAATTAGAACAAGAGTTGGATGAAACAATTATCACACAAAAACGGGGAAGAGGACGTCCCAAAAAACTAGACCGACAAGGTTTTGATCAGAACAATGATGAAAAAGATACCAAAGGGTCCCATAAACGGGGATTCAGCCGAAAGCATAAGACACCTCCAGAGGCTAAACCCCCTAAAATTTGCGAGATCTGTGGGAACAGTTACAAGTTCCAACATGCACTTAATAGCCACATGCGAAGGCACAGAAATGAGAGGCCCTTCAACTGCGATTTCTGTGATAAAGCTTTTGTTTCGGCTGTGGAACTACGACGTCACATGCGAGTGCATACTGGGCAAAAGCCTTACGAATGCTCCTTCTGCGAACGTCGTTTTTCTGACTATGGCAGTCGGATAAAACATGAACGGACCCACACTGGTGAGCGACCGTATGCATGTGCAACTTGCGGCAAAAGCTTTGCCTATGCTCACGTCCTAACAGTTCATATGCGAACACATACCGGCGAGAAGAAATTCATATGCAGTGAGTGCGGAAGAGGTTTTACCAAAAAGCTATACCTCGAAAATCATATGACTCACCACTTGACGGGAACAATTAGAAAACGTAATCCAACTTTAGATGAGGTTATACGCAAATGTGAAGACACGAAAGCAGTTGATAATATTACTTACTCTAGACGGGAGTATGATGATGGTAACCTGATCGACTCGTATGTAAGTGAACCTTCAAAATTGAACGTACAACCAAAAGAGGAAGATATATGTGAAGAACCCAATTCACATGAAACCGATTTGTACCCTATGCATCATGTATAA
Protein Sequence: MTYVVDWSNICLVCLNKGDHLCVFQKDEESSLSIADKIMKCSNFNIIKNNEQPNSICLSCFGDLNIAFKFRQNCEQSNSIINAILSQDHRELEISGLRIKIPLGLKVTKKVPTEPPERPIEQDRIKDENFDIKYSDECEDFDANDYMETTDILEDLDEEDENEDDKKEFQADTENLELITELNELEQELDETIITQKRGRGRPKKLDRQGFDQNNDEKDTKGSHKRGFSRKHKTPPEAKPPKICEICGNSYKFQHALNSHMRRHRNERPFNCDFCDKAFVSAVELRRHMRVHTGQKPYECSFCERRFSDYGSRIKHERTHTGERPYACATCGKSFAYAHVLTVHMRTHTGEKKFICSECGRGFTKKLYLENHMTHHLTGTIRKRNPTLDEVIRKCEDTKAVDNITYSRREYDDGNLIDSYVSEPSKLNVQPKEEDICEEPNSHETDLYPMHHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00335379;
90% Identity: iTF_00426626;
80% Identity: -