Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: Rreb1
Assembly: GCA_963921185.1
Location: OY992532.1:109924814-109931338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.038 11 8.8 0.8 1 21 232 252 232 254 0.93

2 14 0.00036 0.099 15.2 0.2 1 23 264 286 264 286 0.98

3 14 1e-05 0.0028 20.0 5.2 1 23 292 314 292 314 0.98

4 14 0.034 9.4 9.0 2.8 2 19 518 535 518 535 0.97

5 14 5 1.4e+03 2.2 0.6 1 19 581 599 581 601 0.78

6 14 0.0095 2.6 10.7 0.1 1 23 750 772 750 772 0.97

7 14 0.00019 0.053 16.0 1.7 1 23 781 803 781 803 0.99

8 14 0.0005 0.14 14.7 2.0 1 23 809 832 809 832 0.97

9 14 0.001 0.28 13.8 2.1 1 23 1178 1201 1178 1201 0.95

10 14 9.3e-05 0.025 17.0 0.3 2 23 1509 1530 1508 1530 0.97

11 14 0.16 43 6.9 6.3 1 23 1536 1559 1536 1559 0.97

12 14 3.2 8.9e+02 2.7 6.3 1 23 1662 1684 1662 1685 0.95

13 14 0.09 25 7.6 1.1 3 23 1734 1754 1733 1754 0.91

14 14 0.0015 0.41 13.2 4.8 1 23 1760 1782 1760 1782 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.038	11	8.8	0.8	1	21	232	252	232	254	0.93
2	14	0.00036	0.099	15.2	0.2	1	23	264	286	264	286	0.98
3	14	1e-05	0.0028	20.0	5.2	1	23	292	314	292	314	0.98
4	14	0.034	9.4	9.0	2.8	2	19	518	535	518	535	0.97
5	14	5	1.4e+03	2.2	0.6	1	19	581	599	581	601	0.78
6	14	0.0095	2.6	10.7	0.1	1	23	750	772	750	772	0.97
7	14	0.00019	0.053	16.0	1.7	1	23	781	803	781	803	0.99
8	14	0.0005	0.14	14.7	2.0	1	23	809	832	809	832	0.97
9	14	0.001	0.28	13.8	2.1	1	23	1178	1201	1178	1201	0.95
10	14	9.3e-05	0.025	17.0	0.3	2	23	1509	1530	1508	1530	0.97
11	14	0.16	43	6.9	6.3	1	23	1536	1559	1536	1559	0.97
12	14	3.2	8.9e+02	2.7	6.3	1	23	1662	1684	1662	1685	0.95
13	14	0.09	25	7.6	1.1	3	23	1734	1754	1733	1754	0.91
14	14	0.0015	0.41	13.2	4.8	1	23	1760	1782	1760	1782	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACATCGATTAAGAAGGAATTAACTGATATTTCGCTGCGAAAAATGGAGCGACGCCAATCTACAACATCAGATTCATCTGTTGAACCCATGGACTTGGGTCGaacgaattcaaaaataaccaCAGATATGACAGATCATAGCAGCACAACATTGCCAACACCAACACAAATTAAAGATGCCATTTTATCAGATGCCAATAATAAGTATCGCTATGAATCCGACGCCGACGAGTCCGCAGATGATAGAGATCAGCAAAGAAGATCACACAGTCAACATCACTACCACCATCGTCGGCGTGGTAATACGGGACGCGATAAACGAGCTGTCCTCATGGAATGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGATTCAGCAGTAGCAATCACAATAATGCTATTATACCTGATACTGTGatcaatttgaaatcaaaaacaTCGAATAATGATTCAATAAAATCAACTACAGCTTCAACAAATATTACAGCAACAACAAACAACGAATCTGGATTTGTGGATGCTAGCATAGGTCATGTCTTAAATACATCAGGTTCATCGGCTACATCATCCACATCATCATCGTCGCCGACTTCATCATCATCCGCTTCACCATCTGCTAGTAATGTAGCGTCGGCCATATCGAGCCCAGAATCGGGCATGGGTGAACGTGACGATATGAAGTACCTTTGCCCAATTTGTGAAGTAGTGTCGGCGACACCGCATGAATTCACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTCTATCATCTGCCTCTTCACTGGATCGGCACGTTTTGGTGCATACTGGTGAGCGACCCTTTAATTGCAAGTATTGCCAATTAACATTCACTACAAATGGCAATATGCATCGTCACATGCGAACCCACAAACAACACCAGCAACATTATCATCGCAATTCAAATGGTACAAAAGGTGCAAATGGTACCACATCAAGCTTATTACCAGTTCTACCACTAACTGATCAATCGTCAGCAAATCAAACATCTGCCGTTGTTGGTGCTTTACCTTCAAAAACAACGACAAACACAGGCAATGGTGGTGTTTGTAATAGCAATGGTGACACAATTGCGGGTGGAGGAGATGGTTGTGGTGGCGAAAGCTATGATAGTGATGGTGGTTGCTCAACAGATTCATCGAGTGGCATCAGCCAAAGTTCCAATAACAACAATAACAGCaatacaaacaacaaaaacataagcaATTTTAAACGCAAGAGCACCGACAGCTTGGATGACTTGGCCATTATGAAACGGCGCGTGAAGACCACgattaacaacaacaatattaTCGATAACATTCACGCTATCCCAGAAAAGAGTGGAATCGAAATACCAGGCGTCATCGAAGATGTtaagcagcagcaacaacaacaacagcagcagaagCTCTTTTGTCCGGTATGCAATCGTGATGATTTTGGAGGGATGCTTGCATTGGGAGCTCACATGGACAGCGATCATTCTGACATTCCGGCTAAGTGTCGTCATTGTGATGTAGTTTTTAAAACCCACAAACAACTAAATGTACACCCATGCACCAGTAAACTTAAAATTACGCAAGGTTTTAAGGATATAACGTTTGTTGACTTCTCGAGCGAGAAATTCCCTCTAATTGCAAAGTCTCTGTGCGAGCAGAGTATTCGAGCGCCAGTTGGAGGCCAAAAGTTCGAGTGTTCGAAGTGTTATCGGGCATTTCCATGTGCTAGTGCAGTGGAAATTCATGAGAAAGACTGTACGACATCAGGTTTGAATCTGTTCGTAGACTTTCCCAACCGAAAACAAAGGGCTTACAGCGAAAGCTCAGCAAATGCAGACGATGATGATAATCGTCGCGATGAATTTTTTAATCGGCTGTACTTAACAAACAAATCCACAGCACAAAGCATGACAAGTTTGTCAGTATCCTCACCATCTCTGTCCGATGTTAAGTCCTCTGAGCTTGAGAAGACACCTGTTAAGAACTCGCAACTAGAACAGTTCCAGGACACCAAAGAACTTGCTGATATTCAATCGATCCTCAATATAACTTCGTCGTCGTCAACAAGCAATTTTCTGCGTAACTTTGAGAATTCGGTTAATGCACCAATTAGTAATTATGGTGCTGAAAACGGTGAAGAGGAAGCTCAAGATGCGTTCACATCCGAGTTTCGAAAAATGAAACTGCGTGGGGAATTTCCATGCAAACTTTGCACAGCTGTGTTTCCTAATTTGCGAGCACTCAAAGGCCATAACAGAATACACCTTAGTGCTGCTGGTCCAGGACCTTACCGATGCAATATGTGCACATATTCCATTCATGATAAAGCAGCTCTTGTCCGTCACATGCGCACCCACAACGGCGATAGACCTTACGAGTGTGCCATTTGTAATTATGCATTCACGACAAAGGCCAATTGTGAAAGACATTTACGAAACCGTCACGCGAAGACCACACGCGATGAGGTAAAGCGTGCCATTATTTATCATCCATCAGAAGACTCAAATTGTGACGATGCCATGAAGAAATTGCACATGTTTTCCTCACCCGAATTCGATCAAGACGACATGGAGCAACATCATCCGCCCAAAGATCGATCAACTCCGGTATCTCATCTGAAGGAAATGCTTCAAGCCGAATCTAAGCCAATGAAAATCCAAGTGAAGAGTCTTGAAAAGTTGATTGATAAACCATCGTTCAATCAACCCGATGAAATCGAAAAAGCTCATGAGCAAGTTATACCCGAACAAGAGAAAGAGATAAGTAGACCAATTGATCTCAGCATGGATGCACTGGATTTGAGCAAAAAATCagttaaaacagaaaaaatcgAAGAAAAAAGAGCTCAAACTCCACCACCACCAGCGCCTCATATAAATCAAACTCGTCCCAATACCGATGAGCCGAACATCGACATGCGACTGCTTGAGAAAAACCAACAGCTCCTGCTGGCCCAACAGAGACTTCTTAATGAAGCAATGCCAAAAATGGATCCAGCACATTATTTCCAACTGTCGCAGCTTTACAATAACTTAGTGTTCCAGCCGCTTAATCCGTTTTTACTGCAAAATTCCTTTCTTTCAAATAATATCAGTGATTTGAATAAATTCACTCCTATGGGGAATCCTCTTTATAGTGCCACGCCTGTAGAGAGCCCGATCGCACGCgctgaaaaacaaaatcaacaaaGTTCACTACCAAAACCCGTCCAAGACGAGGTCCATtcttcaataaaacaaattcacTCCCAAACTCAATCGCCAGTGCCTGCTCAAAGTCAACCGTTACCACGGAATCCAACACCGTCTCTATCACAAATGCCAGCTTTGCCCAGAAGTCATCAGCATCTTATGGGTGGAACTCATCCCTCGGGAATGCTTCCATCTTCTTTGCCCAATTCAGGACCTGTTAAAATGGTCATCAAAAATGGAGTTCTTATGCCGAAACAAAAACAGCGGCGCTATCGCACTGAACGTCCATTTGCCTGTGAACATTGCTCTGCAAGATTCACCCTGCGCTCGAACATGGAACGCCACATAAAACAACAACATCCTCAGTACTGGGCTCAACGACAACGGACTGGCCATCACATAATGCGTGGCCGTGCCAACAGTTCCTCGATACACACTCACTTACAATCAGCTCACTCGCCTCTGGAAACGCAACATCCAATGGGCACTAGCGGCATGATGACAAATCCCTTGAGTGCCATTTCGGATCAAGTAAAATACGCTATACTTGCTCAACAACTAAAAGCCCGCAAAGAAACAGACATTCTGCAACAGGCTTTATCACAAGGATCCAGCAGTGTGCTCACGCAAAACCCCACATCAGGAATAAGCAGTCTTCGCCAATCACTCAGTGCATCGTCCAATACTAACAATGGCAGCACTGAAGATGATGATCCAAAACTAGTGATCGATGAAGACGACGACGAGCAaggagaagaagaagaagatgacGAAGAAGAGGATTGTGATGACCGGAAGCCAGAAAActtgacaaaatttcaagatttccCAGAGCAATCAACAAATGAAGCAGCAAAGAAAGTTGCCGAATCTATCCTAGAGCAAGCAATGAAAGCTGGAAGCACTAAGATCTCATACCCCAGCGATGAAGATCGTGATCGAACAGCTGGTAAGGATTTCGGCCTCAAGCTGTCGAAGAATATGATTGCTCAAGCGGAGTCAGTTGGCAAATTTCTCAAAGAAGTCGCCAGCTCTCCATTTAAAGATGAGTCAACCGATTTAGTATCGGTCTCCAGGTTAGTTGATAACGCAACTAATTCTATGTCCTTTAATACCTATTTTCGACCCAGTGACGTTGTCAATCAAATGGAGCAAAGCGACGAAGAGGGACTTGTAGCATCGGGTAGTGCATCGGAAAGCAATAACTCTGGTCCAGAAGACATGGTCAGCTCGCAagaaccgaaaaaaaaatcagcataTAGTTCAGCTCCAAATCGGGTTTCCTGTCCATATTGCCAGCGAATGTTCCCATGGTCCAGTTCGTTGCGAAGACACATTCTTACCCATACCGGCCAAAAACCATTTAAATGCTCACATTGCCCGCTACTCTTCACAACCAAAAGCAATTGCGATCGCCATCTATTGCGCAAACATGGAAACGTTGAATCGGCTGTTTCATTATATGTTCCTATTGAAGACGTCAATGAGCCTTTACCAGTACCCAAATCTGTCGAGGAAATCGAACTACAGCAACAGCAGCTTCTTCTTcaacaaaaagaacaaaaaaggtTAGAAGAACTAAAAGAGTTGCAGAAAATCCAACCACCAGTTCAAAAGCCATTCGAAGGGAATCAGGAGCAAACACCGAGTACAAATTCAACATCAACCAATTCTACAAATGCCGCTCCTAAACTTGACCCGATTCCATCCTCTCCAATGATTTCATCCTCAGAGTTGCCATTCAAGTGCCATCTGTGTGACAGTTCGTTTGCGGAAAGATTTCAATGCCTTGATCACATTAAGATTCATCATGCTCAAGAATTTTCACTTCTTCTGTCTAAAGGCGCAATTGACAATGAAGCCGATATTAACAGCCAAGTCCAGTCTACCGAAGATGATGAAAAACGAGACGAAAGCCGAGGCAAGTATCCAGACTACACCAACCGAAAGGTAATTTGCGCTTTCTGTATGCGACGTTTCTGGTCCACTGAGGACTTGCGTCGCCACATGCGAACACATTCTGGCGAAAGACCATTTCAATGCGATATATGCCTACGTAAATTCACCCTAAAGCACAGCATGCTGCGACACATGAAAAAACATAGCGGGGGCAGTCATTCCAGCAACGGAGCTGCCAATGCCGGCAACAGCGGATCTGATGTCTCCGATGATGAACAACCACCATCTAGTGTCATGCTTGCCAATGCCTTACGTTCTCACAAAATCCAAGAGCTTTTCTCAAAAGTCAGCAGTGAATGGCGCAATAATCGTATCTCCGGTGAGCACAAAGAGAACATCGAGGAGCACAATAATCAGTCTGATCTTATTGGCAACTTGCTGGGCATCAGCGATCAAGGCATTCTTAACAAACTGCTTTCGTCAGCCGATGAAGCAGCTAAGTTTCTTGGTGTTGAAAAGTAA
Protein Sequence: MLKTSIKKELTDISLRKMERRQSTTSDSSVEPMDLGRTNSKITTDMTDHSSTTLPTPTQIKDAILSDANNKYRYESDADESADDRDQQRRSHSQHHYHHRRRGNTGRDKRAVLMECTDSPHSLRKKFRFSSSNHNNAIIPDTVINLKSKTSNNDSIKSTTASTNITATTNNESGFVDASIGHVLNTSGSSATSSTSSSSPTSSSSASPSASNVASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGTTSSLLPVLPLTDQSSANQTSAVVGALPSKTTTNTGNGGVCNSNGDTIAGGGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNKNISNFKRKSTDSLDDLAIMKRRVKTTINNNNIIDNIHAIPEKSGIEIPGVIEDVKQQQQQQQQQKLFCPVCNRDDFGGMLALGAHMDSDHSDIPAKCRHCDVVFKTHKQLNVHPCTSKLKITQGFKDITFVDFSSEKFPLIAKSLCEQSIRAPVGGQKFECSKCYRAFPCASAVEIHEKDCTTSGLNLFVDFPNRKQRAYSESSANADDDDNRRDEFFNRLYLTNKSTAQSMTSLSVSSPSLSDVKSSELEKTPVKNSQLEQFQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDEIEKAHEQVIPEQEKEISRPIDLSMDALDLSKKSVKTEKIEEKRAQTPPPPAPHINQTRPNTDEPNIDMRLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLNPFLLQNSFLSNNISDLNKFTPMGNPLYSATPVESPIARAEKQNQQSSLPKPVQDEVHSSIKQIHSQTQSPVPAQSQPLPRNPTPSLSQMPALPRSHQHLMGGTHPSGMLPSSLPNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRTGHHIMRGRANSSSIHTHLQSAHSPLETQHPMGTSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTQNPTSGISSLRQSLSASSNTNNGSTEDDDPKLVIDEDDDEQGEEEEDDEEEDCDDRKPENLTKFQDFPEQSTNEAAKKVAESILEQAMKAGSTKISYPSDEDRDRTAGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESTDLVSVSRLVDNATNSMSFNTYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVSSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQLLLQQKEQKRLEELKELQKIQPPVQKPFEGNQEQTPSTNSTSTNSTNAAPKLDPIPSSPMISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDNEADINSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGAANAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVSSEWRNNRISGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -