Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: grau
Assembly: GCA_963921185.1
Location: OY992531.1:48821357-48838248[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 3.5 9.7e+02 2.6 2.5 2 23 246 268 245 268 0.93

2 25 0.00018 0.05 16.1 2.4 1 23 300 322 300 322 0.99

3 25 0.00028 0.077 15.5 2.4 1 23 329 351 329 351 0.98

4 25 0.001 0.28 13.8 2.9 3 23 360 381 358 381 0.96

5 25 0.00032 0.088 15.3 1.5 2 23 390 412 389 412 0.96

6 25 0.00024 0.067 15.7 0.4 2 23 420 442 420 442 0.95

7 25 5.2 1.4e+03 2.1 0.2 1 14 448 462 448 465 0.82

8 25 0.14 38 7.1 1.1 2 23 699 721 698 721 0.94

9 25 0.32 88 5.9 1.0 6 23 730 747 730 747 0.99

10 25 0.0001 0.027 16.9 0.2 1 23 753 775 753 775 0.99

11 25 2.2e-05 0.0061 19.0 1.4 1 23 783 805 783 805 0.99

12 25 0.0001 0.028 16.9 0.3 2 23 812 834 811 834 0.95

13 25 2.1e-06 0.00058 22.2 0.5 3 23 842 862 841 862 0.96

14 25 0.00075 0.21 14.2 0.4 2 23 871 893 870 893 0.95

15 25 0.00036 0.1 15.2 0.1 1 23 900 923 900 923 0.94

16 25 0.006 1.6 11.3 0.2 1 17 929 945 929 946 0.88

17 25 0.33 91 5.9 2.9 2 21 1104 1123 1103 1126 0.94

18 25 4.4e-05 0.012 18.0 1.0 1 23 1158 1180 1158 1180 0.98

19 25 2.3e-05 0.0065 18.9 3.8 1 23 1188 1210 1188 1210 0.98

20 25 1.9e-05 0.0053 19.2 0.3 1 23 1218 1241 1218 1241 0.95

21 25 0.0069 1.9 11.1 0.3 3 23 1249 1269 1248 1269 0.96

22 25 0.00013 0.036 16.6 0.4 2 23 1278 1300 1277 1300 0.95

23 25 0.0011 0.31 13.6 0.1 1 23 1307 1330 1307 1330 0.92

24 25 1.6e-06 0.00045 22.6 0.9 1 23 1336 1358 1336 1358 0.98

25 25 4e-05 0.011 18.2 5.0 1 23 1364 1387 1364 1387 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	3.5	9.7e+02	2.6	2.5	2	23	246	268	245	268	0.93
2	25	0.00018	0.05	16.1	2.4	1	23	300	322	300	322	0.99
3	25	0.00028	0.077	15.5	2.4	1	23	329	351	329	351	0.98
4	25	0.001	0.28	13.8	2.9	3	23	360	381	358	381	0.96
5	25	0.00032	0.088	15.3	1.5	2	23	390	412	389	412	0.96
6	25	0.00024	0.067	15.7	0.4	2	23	420	442	420	442	0.95
7	25	5.2	1.4e+03	2.1	0.2	1	14	448	462	448	465	0.82
8	25	0.14	38	7.1	1.1	2	23	699	721	698	721	0.94
9	25	0.32	88	5.9	1.0	6	23	730	747	730	747	0.99
10	25	0.0001	0.027	16.9	0.2	1	23	753	775	753	775	0.99
11	25	2.2e-05	0.0061	19.0	1.4	1	23	783	805	783	805	0.99
12	25	0.0001	0.028	16.9	0.3	2	23	812	834	811	834	0.95
13	25	2.1e-06	0.00058	22.2	0.5	3	23	842	862	841	862	0.96
14	25	0.00075	0.21	14.2	0.4	2	23	871	893	870	893	0.95
15	25	0.00036	0.1	15.2	0.1	1	23	900	923	900	923	0.94
16	25	0.006	1.6	11.3	0.2	1	17	929	945	929	946	0.88
17	25	0.33	91	5.9	2.9	2	21	1104	1123	1103	1126	0.94
18	25	4.4e-05	0.012	18.0	1.0	1	23	1158	1180	1158	1180	0.98
19	25	2.3e-05	0.0065	18.9	3.8	1	23	1188	1210	1188	1210	0.98
20	25	1.9e-05	0.0053	19.2	0.3	1	23	1218	1241	1218	1241	0.95
21	25	0.0069	1.9	11.1	0.3	3	23	1249	1269	1248	1269	0.96
22	25	0.00013	0.036	16.6	0.4	2	23	1278	1300	1277	1300	0.95
23	25	0.0011	0.31	13.6	0.1	1	23	1307	1330	1307	1330	0.92
24	25	1.6e-06	0.00045	22.6	0.9	1	23	1336	1358	1336	1358	0.98
25	25	4e-05	0.011	18.2	5.0	1	23	1364	1387	1364	1387	0.98

Sequence Information

Coding Sequence: atgCTTTGCATACTGTGCATATCAGTATCAGATGAAATGCTTAATATATTTGACGAAAACGGCATTAATCTAAACATAAGCAACATCATAACGAAGCACTTTTGGATAAAGCCAAGTACGGAAGATAACAATTCGAAAGCTATTTGCTGTTCATGTTGGAAAACTGTAGAATCATTTCATAAATTCTATCAAACTATTGAAGAAGCTCACACCAAGCTTACAACATGTCTAAAACTTCCCATTGAAGAAAGTGATCCTGAATCGAATCATTTCGAagtattttcagattttttcacACCAGTTGTAAAAGTAGAAAATTCCGAAGAAACTAAAGTTGAGTTGCCAGAAACTGTAGAAACAGCTGAAATAGTATCAATCCATCTCAATAATACTGTGACAAAGGATGATGAAACTCAAAAAGCCCTTAGTTCCGATTCGGAGTCTGAAATTCCTCTCTTCCAGATAAGTAATCAAGCAAAGTATGTTAAAGACGATAAGGATGAAGGAGGAAATAGTGGTAATAATTCGGACTCGGATAACGATGCGTCAGCCCAAGACAACGGACACCAGCAACAAGAATCTGAATCTGATAGTGGCTCAGACTCTGACAGTGAATACAAAACACCTAAGAAAAAAGCCAAGGTGAAAGTTTCATCGACAACAACTGATGGctcaaataaaaaactaatgCCGTGCAAGGAATTCGATGGTTTCATCAAACAAAATATGGAACTCAAGTGCAATATCTGCTCAAAGCCTCTTGAAAATTTCTTCTGCGTCAAAGAGCACTTTAAAAAGGCCCACAAACAAAACGGTTATGTTAAATGCTGCGAAAGGGAATGGACCAGTCGCTTTTCCTTGGTCCATCATTTGCTGCTGCATAAAAATCCAGATTTGTATAAGTGTCAAAAATGCGGTCGAGTTTTGGCcaacaaaaaaagttacaagaatcACACGCAATCGCATATTACCCAAGAGCGTATTCATAAGTGCCCGAAATGTGCTAAAATGTTTTCTTCCATTGCCAAATTGGAAAAACATTCCAAAACACACATCAAACCACGCATTGATCAAATATGTGAACAATGTGGCAAAGTTTGTCATAGCAAACAGAGTCTCATTGCACATCAGAAGCGAGAACATTTAGGTTTTGTAAAGCAGCGTGTCCAATGTCCAAAGTGCGGCACTTATTTGTCAGATTCATCAACCTTACACACTCATATGAAGTATCAACATCCCAAAGTTGAAGTTGTGAATGTTTGTAAACTATGCGGGAAAGTTTCATCTACTGGTTATGGACTTAAACGACACATGCAATACATGCATTCAATGGAACGGGTCCATAAGTGTAATATCTGTGAAGATAAGGCATTCAAAACTGCACAAAGGCTCCGGCCAAATGCAAACGATATAAATGGAAAAGTCATTTGCACATCTTGTTGGGCAGAATTAAGTTCCTTTCATGAGTTCTACGTGCAAGTTGAGGAAGCCCATGTCAGTCGgctaaaagtaattgaaaatgaTGAGGAGTTAAAGTTGGAGAATGTTTTTGTTCAATTCGCTCAGTCAAATGTTGCTCCTGATGAAGAAATAGCATCGGAATTTCTGGATTCAGATATTAAACTAGAAGTCAAAGAAGACACTGAAATTCGTCTGAATGCGGATGATTATCATGCTCCAGAACATAATGAAAATGAAACGCACTCCACAGAATCGAAGGCGGTTAGCTTAGAAGCTCCACCTGCTAGCTCTACAAGAAGTCGTAAATCTGTAGAAAAACCAAACGCTCACAATGATTCTTCTAGTGAAGATGACAAAAGCTTTGACAATATCGAAGCTGACGGATGCAATTCAGCAGATTGGCAAAACGAGGAAGATAACTCGGACAACACCGAAGAAGATAGTGACTATGAAGACAGGACAACGAAGGCAAAAAAGTCGAGAGAACCCTCAAAGGAAATCAAAAAGCGTGGTCGACCGAGAAAGGGTGAATCCAGATCTCCTTGTAAGAAACCACGAAACTCTGgggaacaaaatttgaaaagaaagcGCATGCAAGAATTTGATGAAATAATTGCTAAAAATATGAAGCTTTCATGTGCCATATGTCATGATATATTTATTAACTTTGCCGCTCTCAAAAGACATTTTCGATATAAACACAACGAATGTGGATATGTGGTTTGCTGTACCAAAAAGTTCCGTAAACGCGGTGTTCTCGTGGATCACATATGCACACATCAAAATCCAGAGTACTTTAAGTGTGAACAATGTGGAAGGGTGTTGGCCAACAGAAAAGGCCTGGACAGTCACATGCTAACTCATGATACAGAAAAACAACGGATATATCAATGCGATCAATGTACGTTGAGTTTCTACACCAGACCACTCTTGACACGTCACTTGCAAACGCACATTTCCGAACGCAACATCAAGTGTCCTGATTGTGACAAATTTTTCTCAACACAAGACATCTTACGCACTCATGTGAACAATGTTCACAATGCTGCATACACGAGGATCTGCGATCAGTGTGGGAAATCTTTCCGCCGGCCGGATGCATTTCGACGTCATCAATTGGAACATGATGGTATTACGCAGCCAATGGTTCCTTGTGAAAAATGCAATGTTAAATTAACGAGCAAATATGGATTGAAGCGACACATGGAATCAATGCATCCCGAACAAGATGTCAAGCATATATGCAATGAGTGTGGAAAAGTTGCACCAAGTGCTGCTGCATTGCAACGGCATATTTCCTATATGCACAAAATGGAACGTAAATACAAGTGTCCTATGTGTGATAAAGCATTTAAAAAGACTGGTGGGCTTAAGCTGGAGGTGAAAGATGATGGAGAAATTTGCTTGCCATTAATCGAACACACTTCTGAGATCGACTTAAAACCTGACGACCACGATATCGAAGAACAGGAGGAATATGCACTTATTTATTCAAGTGATACCGATGACTCTGAGATTCCACTTGCAAACTTTACAAAAACTCACTCGAAAAACAAACGcagaacaaaaacaacaataacttcCAGTAATGATGATCAGGAATCATCAGCAGAATGGCAAGACGATAATCATACAAATGAAGATGGTGATGATGACGAAGAAGATAGCGAATttgaagtaaaacaaaaaataatgcccATTCGAAAATCGCAAACTGGCAAGAAACGCGGTAGACCCCTCAAAGGCACTCCCAAAGATGCATCTCGGAAAATAATTACCGAAGAGCAAATCAAAAAGCGAAAACTCTCACATGAGTACGACGACATCATACAAAAGCACATGAAACTGACGTGTAATATTTGTCAGTTAGCTTTGACAAACTTCTTTGCACTAAAGAAGCACTATCGTTGCAAGCACAACGAGCGAGGATATGCTTTTTGCTGTAgcaaaaaattccttaaacgGGGTGTGCTCGTTGATCACATTTACACACACTTGAATCCAGAACATTTCAAGTGTGACAAATGTGACAAGGTGCTTGCTGATCGTCGATGCTTGGAGGTTCACATGAATATACACAGTGAAGAGAAACAACGTATCTATCAGTGTGATCAGTGTAACAAGAGTTTCTTCAAGAAACCCCTGCTGACGCGTCACATGCATATTCACATACCTCAGGAGGAGCGAAAGTTTCCCTGCGAAGAATGCAACAAGTTCTTTCCATCGAATTACACTCTGCGTGCACATGTCAACAACGTGCACCAGAATGCATATGCCAAATTCTGCGATCAGTGTGGCAAGTCGATTCGTGGACGGGAAGCATTCCAAAGGCATTTGTTGGAACATGCTGGTGTTCCTATTCCCACTGTACAATGTGAGAAGTGCGGAGCTAAACTCAAGAACAAATATGGCCTCAAGAGGCACATGAATGCAATGCATGCAGAAACGAGTGTGCCTCATGTGTGTAATATTTGTGGCAAAGTAGCACCGAATGCGCCTGCGCTACAAAGGCATTACTATTATGTGCACAAGTGTGAGCGTAGTCACAAGTGTCCCATGTGTGATAAGGCCTTTAAAAAGGCTGCAGGATTGAAGGAACACATGACAACTCATACTGGAGAAGTTCTTTACACATGTCCACATTGTCCGAAAACATTTAATTCAAACGCCAACATGCATTCTCATCGTAAAAAAATGCATCGCAAAGAATGGGAAGAAAACCGAAGGCATCCTCACATGGGAGCAAGTGCTAACGCAAATGCCACCGAGGAGAACAACCAGCAGCAGTAA
Protein Sequence: MLCILCISVSDEMLNIFDENGINLNISNIITKHFWIKPSTEDNNSKAICCSCWKTVESFHKFYQTIEEAHTKLTTCLKLPIEESDPESNHFEVFSDFFTPVVKVENSEETKVELPETVETAEIVSIHLNNTVTKDDETQKALSSDSESEIPLFQISNQAKYVKDDKDEGGNSGNNSDSDNDASAQDNGHQQQESESDSGSDSDSEYKTPKKKAKVKVSSTTTDGSNKKLMPCKEFDGFIKQNMELKCNICSKPLENFFCVKEHFKKAHKQNGYVKCCEREWTSRFSLVHHLLLHKNPDLYKCQKCGRVLANKKSYKNHTQSHITQERIHKCPKCAKMFSSIAKLEKHSKTHIKPRIDQICEQCGKVCHSKQSLIAHQKREHLGFVKQRVQCPKCGTYLSDSSTLHTHMKYQHPKVEVVNVCKLCGKVSSTGYGLKRHMQYMHSMERVHKCNICEDKAFKTAQRLRPNANDINGKVICTSCWAELSSFHEFYVQVEEAHVSRLKVIENDEELKLENVFVQFAQSNVAPDEEIASEFLDSDIKLEVKEDTEIRLNADDYHAPEHNENETHSTESKAVSLEAPPASSTRSRKSVEKPNAHNDSSSEDDKSFDNIEADGCNSADWQNEEDNSDNTEEDSDYEDRTTKAKKSREPSKEIKKRGRPRKGESRSPCKKPRNSGEQNLKRKRMQEFDEIIAKNMKLSCAICHDIFINFAALKRHFRYKHNECGYVVCCTKKFRKRGVLVDHICTHQNPEYFKCEQCGRVLANRKGLDSHMLTHDTEKQRIYQCDQCTLSFYTRPLLTRHLQTHISERNIKCPDCDKFFSTQDILRTHVNNVHNAAYTRICDQCGKSFRRPDAFRRHQLEHDGITQPMVPCEKCNVKLTSKYGLKRHMESMHPEQDVKHICNECGKVAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGGLKLEVKDDGEICLPLIEHTSEIDLKPDDHDIEEQEEYALIYSSDTDDSEIPLANFTKTHSKNKRRTKTTITSSNDDQESSAEWQDDNHTNEDGDDDEEDSEFEVKQKIMPIRKSQTGKKRGRPLKGTPKDASRKIITEEQIKKRKLSHEYDDIIQKHMKLTCNICQLALTNFFALKKHYRCKHNERGYAFCCSKKFLKRGVLVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNIHSEEKQRIYQCDQCNKSFFKKPLLTRHMHIHIPQEERKFPCEECNKFFPSNYTLRAHVNNVHQNAYAKFCDQCGKSIRGREAFQRHLLEHAGVPIPTVQCEKCGAKLKNKYGLKRHMNAMHAETSVPHVCNICGKVAPNAPALQRHYYYVHKCERSHKCPMCDKAFKKAAGLKEHMTTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRKEWEENRRHPHMGASANANATEENNQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -